RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 ZNF750Q32MQ0 723 aa17.23■□□□□ 0.35
CLK1-211ENST00000481641 CMPK2Q5EBM0 449 aa17.23■□□□□ 0.35
CLK1-211ENST00000481641 KHDRBS2Q5VWX1 349 aaKnown RBP17.23■□□□□ 0.35
CLK1-211ENST00000481641 HSDL2Q6YN16 418 aa17.23■□□□□ 0.35
CLK1-211ENST00000481641 CHSY3Q70JA7 882 aa17.23■□□□□ 0.35
CLK1-211ENST00000481641 ZNF572Q7Z3I7 529 aaPredicted RBP17.23■□□□□ 0.35
CLK1-211ENST00000481641 MYLK4Q86YV6 388 aaPredicted RBP17.23■□□□□ 0.35
CLK1-211ENST00000481641 ZFP62Q8NB50 900 aaPredicted RBP17.23■□□□□ 0.35
CLK1-211ENST00000481641 MORN4Q8NDC4 146 aa17.23■□□□□ 0.35
CLK1-211ENST00000481641 PSD4Q8NDX1 1056 aa17.23■□□□□ 0.35
CLK1-211ENST00000481641 SRFBP1Q8NEF9 429 aaKnown RBP17.23■□□□□ 0.35
CLK1-211ENST00000481641 OR14A16Q8NHC5 309 aa17.23■□□□□ 0.35
CLK1-211ENST00000481641 C16orf52Q8NHV5 167 aa17.23■□□□□ 0.35
CLK1-211ENST00000481641 SLC2A12Q8TD20 617 aa17.23■□□□□ 0.35
CLK1-211ENST00000481641 DOK4Q8TEW6 326 aa17.23■□□□□ 0.35
CLK1-211ENST00000481641 DAZLQ92904 295 aaKnown RBP17.23■□□□□ 0.35
CLK1-211ENST00000481641 UBE2E3Q969T4 207 aa17.23■□□□□ 0.35
CLK1-211ENST00000481641 RASL10BQ96S79 203 aa17.23■□□□□ 0.35
CLK1-211ENST00000481641 LRRC1Q9BTT6 524 aa17.23■□□□□ 0.35
CLK1-211ENST00000481641 DEFB127Q9H1M4 99 aa17.23■□□□□ 0.35
CLK1-211ENST00000481641 TIMMDC1Q9NPL8 285 aa17.23■□□□□ 0.35
CLK1-211ENST00000481641 HPF1Q9NWY4 346 aa17.23■□□□□ 0.35
CLK1-211ENST00000481641 HRH3Q9Y5N1 445 aa17.23■□□□□ 0.35
CLK1-211ENST00000481641 PRRG2O14669 202 aa17.22■□□□□ 0.35
CLK1-211ENST00000481641 FGF17O60258 216 aa17.22■□□□□ 0.35
CLK1-211ENST00000481641 PRKRAO75569 313 aaKnown RBP17.22■□□□□ 0.35
CLK1-211ENST00000481641 TPOP07202 933 aa17.22■□□□□ 0.35
CLK1-211ENST00000481641 EPB42P16452 691 aa17.22■□□□□ 0.35
CLK1-211ENST00000481641 SLAMF1Q13291 335 aa17.22■□□□□ 0.35
CLK1-211ENST00000481641 PFKFB4Q16877 469 aa17.22■□□□□ 0.35
CLK1-211ENST00000481641 TMEM35AQ53FP2 167 aa17.22■□□□□ 0.35
CLK1-211ENST00000481641 DEPDC1Q5TB30 811 aa17.22■□□□□ 0.35
CLK1-211ENST00000481641 OR4C11Q6IEV9 310 aa17.22■□□□□ 0.35
CLK1-211ENST00000481641 GRHL2Q6ISB3 625 aa17.22■□□□□ 0.35
CLK1-211ENST00000481641 DGAT2L6Q6ZPD8 337 aa17.22■□□□□ 0.35
CLK1-211ENST00000481641 CD163Q86VB7 1156 aa17.22■□□□□ 0.35
CLK1-211ENST00000481641 HUS1BQ8NHY5 278 aa17.22■□□□□ 0.35
CLK1-211ENST00000481641 CMTM7Q96FZ5 175 aa17.22■□□□□ 0.35
CLK1-211ENST00000481641 DMRTA2Q96SC8 542 aa17.22■□□□□ 0.35
CLK1-211ENST00000481641 MTERF1Q99551 399 aaKnown RBP17.22■□□□□ 0.35
CLK1-211ENST00000481641 CHST11Q9NPF2 352 aa17.22■□□□□ 0.35
CLK1-211ENST00000481641 SNX15Q9NRS6 342 aa17.22■□□□□ 0.35
CLK1-211ENST00000481641 ZDHHC18Q9NUE0 388 aa17.22■□□□□ 0.35
CLK1-211ENST00000481641 ANGPTL3Q9Y5C1 460 aa17.22■□□□□ 0.35
CLK1-211ENST00000481641 A0A087X1B8 175 aa17.21■□□□□ 0.35
CLK1-211ENST00000481641 ENO4A6NNW6 628 aa17.21■□□□□ 0.35
CLK1-211ENST00000481641 WASHC1A8K0Z3 465 aa17.21■□□□□ 0.35
CLK1-211ENST00000481641 FAM166BA8MTA8 275 aa17.21■□□□□ 0.35
CLK1-211ENST00000481641 SCELO95171 688 aa17.21■□□□□ 0.35
CLK1-211ENST00000481641 CLDN14O95500 239 aa17.21■□□□□ 0.35
CLK1-211ENST00000481641 TUBB4AP04350 444 aa17.21■□□□□ 0.35
CLK1-211ENST00000481641 GFAPP14136 432 aa17.21■□□□□ 0.35
CLK1-211ENST00000481641 COX6B1P14854 86 aa17.21■□□□□ 0.35
CLK1-211ENST00000481641 AGAP20933 346 aa17.21■□□□□ 0.35
CLK1-211ENST00000481641 PTGS2P35354 604 aa17.21■□□□□ 0.35
CLK1-211ENST00000481641 KIR3DL1P43629 444 aa17.21■□□□□ 0.35
CLK1-211ENST00000481641 RNF4P78317 190 aa17.21■□□□□ 0.35
CLK1-211ENST00000481641 PCDH1Q08174 1060 aa17.21■□□□□ 0.35
CLK1-211ENST00000481641 SERTAD2Q14140 314 aa17.21■□□□□ 0.35
CLK1-211ENST00000481641 SETDB1Q15047 1291 aa17.21■□□□□ 0.35
CLK1-211ENST00000481641 C18orf63Q68DL7 685 aa17.21■□□□□ 0.35
CLK1-211ENST00000481641 FAM57AQ8TBR7 257 aa17.21■□□□□ 0.35
CLK1-211ENST00000481641 PPWD1Q96BP3 646 aaKnown RBP17.21■□□□□ 0.35
CLK1-211ENST00000481641 MTFMTQ96DP5 389 aaKnown RBP17.21■□□□□ 0.35
CLK1-211ENST00000481641 PPT2Q9UMR5 302 aa17.21■□□□□ 0.35
CLK1-211ENST00000481641 SPACA6W5XKT8 324 aa17.21■□□□□ 0.35
CLK1-211ENST00000481641 DCHS2Q6V1P9 2916 aa17.21■□□□□ 0.35
CLK1-211ENST00000481641 DNAJC13O75165 2243 aa17.2■□□□□ 0.34
CLK1-211ENST00000481641 A0A096LPK6 155 aa17.2■□□□□ 0.34
CLK1-211ENST00000481641 E9PLN8 166 aa17.2■□□□□ 0.34
CLK1-211ENST00000481641 PLPP1O14494 284 aa17.2■□□□□ 0.34
CLK1-211ENST00000481641 RAP1GDS1P52306 607 aa17.2■□□□□ 0.34
CLK1-211ENST00000481641 HNRNPH2P55795 449 aaKnown RBP17.2■□□□□ 0.34
CLK1-211ENST00000481641 RPS13P62277 151 aaKnown RBP17.2■□□□□ 0.34
CLK1-211ENST00000481641 PLGLB1Q02325 96 aa17.2■□□□□ 0.34
CLK1-211ENST00000481641 FAM83EQ2M2I3 478 aa17.2■□□□□ 0.34
CLK1-211ENST00000481641 C8orf74Q6P047 294 aa17.2■□□□□ 0.34
CLK1-211ENST00000481641 OR2M7Q8NG81 312 aa17.2■□□□□ 0.34
CLK1-211ENST00000481641 RHEBL1Q8TAI7 183 aa17.2■□□□□ 0.34
CLK1-211ENST00000481641 ZNF721Q8TF20 911 aa17.2■□□□□ 0.34
CLK1-211ENST00000481641 RGMAQ96B86 450 aa17.2■□□□□ 0.34
CLK1-211ENST00000481641 SCYL1Q96KG9 808 aa17.2■□□□□ 0.34
CLK1-211ENST00000481641 GPR78Q96P69 363 aa17.2■□□□□ 0.34
CLK1-211ENST00000481641 VKORC1Q9BQB6 163 aa17.2■□□□□ 0.34
CLK1-211ENST00000481641 RUBCNLQ9H714 662 aa17.2■□□□□ 0.34
CLK1-211ENST00000481641 DMRT3Q9NQL9 472 aa17.2■□□□□ 0.34
CLK1-211ENST00000481641 ZNF358Q9NW07 568 aa17.2■□□□□ 0.34
CLK1-211ENST00000481641 NINJ2Q9NZG7 142 aa17.2■□□□□ 0.34
CLK1-211ENST00000481641 CPSF2Q9P2I0 782 aaKnown RBP17.2■□□□□ 0.34
CLK1-211ENST00000481641 ATG4BQ9Y4P1 393 aa17.2■□□□□ 0.34
CLK1-211ENST00000481641 SYNDIG1LA6NDD5 238 aa17.19■□□□□ 0.34
CLK1-211ENST00000481641 SYCE1LA8MT33 242 aa17.19■□□□□ 0.34
CLK1-211ENST00000481641 HRKO00198 91 aa17.19■□□□□ 0.34
CLK1-211ENST00000481641 SIX3O95343 332 aaPredicted RBP17.19■□□□□ 0.34
CLK1-211ENST00000481641 ALDOAP04075 364 aaKnown RBP17.19■□□□□ 0.34
CLK1-211ENST00000481641 SERPINB1P30740 379 aa17.19■□□□□ 0.34
CLK1-211ENST00000481641 PIK3CGP48736 1102 aa17.19■□□□□ 0.34
CLK1-211ENST00000481641 PPIAP62937 165 aaKnown RBP17.19■□□□□ 0.34
CLK1-211ENST00000481641 IGLV3-21P80748 117 aaPredicted RBP17.19■□□□□ 0.34
CLK1-211ENST00000481641 ACAP2Q15057 778 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms