RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 MMP20O60882 483 aa23.44■■□□□ 1.34
SYNGAP1-206ENST00000479510 POU2F1P14859 743 aa23.44■■□□□ 1.34
SYNGAP1-206ENST00000479510 MEF2AQ02078 507 aaPredicted RBP23.44■■□□□ 1.34
SYNGAP1-206ENST00000479510 SLX4IPQ5VYV7 408 aa23.44■■□□□ 1.34
SYNGAP1-206ENST00000479510 ZNF547Q8IVP9 402 aa23.44■■□□□ 1.34
SYNGAP1-206ENST00000479510 IL17RCQ8NAC3 791 aa23.44■■□□□ 1.34
SYNGAP1-206ENST00000479510 SLC38A5Q8WUX1 472 aa23.44■■□□□ 1.34
SYNGAP1-206ENST00000479510 KLHL25Q9H0H3 589 aa23.44■■□□□ 1.34
SYNGAP1-206ENST00000479510 CRNNQ9UBG3 495 aaPredicted RBP23.44■■□□□ 1.34
SYNGAP1-206ENST00000479510 BRCA2P51587 3418 aa23.44■■□□□ 1.34
SYNGAP1-206ENST00000479510 HSMCR30P0CW71 290 aa23.44■■□□□ 1.34
SYNGAP1-206ENST00000479510 HSD17B2P37059 387 aa23.44■■□□□ 1.34
SYNGAP1-206ENST00000479510 DEFA1P59665 94 aa23.44■■□□□ 1.34
SYNGAP1-206ENST00000479510 DEFA3P59666 94 aa23.44■■□□□ 1.34
SYNGAP1-206ENST00000479510 HEPACAMQ14CZ8 416 aa23.44■■□□□ 1.34
SYNGAP1-206ENST00000479510 CYP27C1Q4G0S4 372 aa23.44■■□□□ 1.34
SYNGAP1-206ENST00000479510 SPANXN2Q5MJ10 180 aa23.44■■□□□ 1.34
SYNGAP1-206ENST00000479510 DEPDC1Q5TB30 811 aa23.44■■□□□ 1.34
SYNGAP1-206ENST00000479510 KHDRBS2Q5VWX1 349 aaKnown RBP23.44■■□□□ 1.34
SYNGAP1-206ENST00000479510 RAET1GQ6H3X3 334 aa23.44■■□□□ 1.34
SYNGAP1-206ENST00000479510 ZNF740Q8NDX6 193 aa23.44■■□□□ 1.34
SYNGAP1-206ENST00000479510 TEFMQ96QE5 360 aaKnown RBP23.44■■□□□ 1.34
SYNGAP1-206ENST00000479510 PITHD1Q9GZP4 211 aaPredicted RBP23.44■■□□□ 1.34
SYNGAP1-206ENST00000479510 OR52A5Q9H2C5 316 aa23.44■■□□□ 1.34
SYNGAP1-206ENST00000479510 SLC27A6Q9Y2P4 619 aa23.44■■□□□ 1.34
SYNGAP1-206ENST00000479510 TRIM43BA6NCK2 446 aa23.43■■□□□ 1.34
SYNGAP1-206ENST00000479510 TLR4O00206 839 aa23.43■■□□□ 1.34
SYNGAP1-206ENST00000479510 FFAR1O14842 300 aa23.43■■□□□ 1.34
SYNGAP1-206ENST00000479510 KIAA0513O60268 411 aa23.43■■□□□ 1.34
SYNGAP1-206ENST00000479510 MFN2O95140 757 aa23.43■■□□□ 1.34
SYNGAP1-206ENST00000479510 LINC00271P0C7V0 271 aa23.43■■□□□ 1.34
SYNGAP1-206ENST00000479510 ENDOUP21128 410 aaKnown RBP23.43■■□□□ 1.34
SYNGAP1-206ENST00000479510 FRKP42685 505 aaPredicted RBP23.43■■□□□ 1.34
SYNGAP1-206ENST00000479510 PDZD3Q86UT5 571 aa23.43■■□□□ 1.34
SYNGAP1-206ENST00000479510 TRIM69Q86WT6 500 aa23.43■■□□□ 1.34
SYNGAP1-206ENST00000479510 DCUN1D3Q8IWE4 304 aa23.43■■□□□ 1.34
SYNGAP1-206ENST00000479510 GALNT6Q8NCL4 622 aa23.43■■□□□ 1.34
SYNGAP1-206ENST00000479510 REV1Q9UBZ9 1251 aa23.43■■□□□ 1.34
SYNGAP1-206ENST00000479510 SNX8Q9Y5X2 465 aa23.43■■□□□ 1.34
SYNGAP1-206ENST00000479510 PDPK1O15530 556 aa23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 SCG5P05408 212 aa23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 CLTBP09497 229 aa23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 ERGP11308 486 aa23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 CSTF2P33240 577 aaKnown RBP eCLIP23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 MAPK12P53778 367 aa23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 LIM2P55344 173 aa23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 CNTN1Q12860 1018 aa23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 SLC13A2Q13183 592 aa23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 NCF4Q15080 339 aa23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 DHCR24Q15392 516 aa23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 MED22Q15528 200 aa23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 TSTQ16762 297 aaKnown RBP23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 CCDC190Q86UF4 302 aa23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 KRT73Q86Y46 540 aa23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 HORMAD2Q8N7B1 307 aa23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 OR5M11Q96RB7 305 aa23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 CCDC32Q9BV29 185 aa23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 TMEM121BQ9BXQ6 578 aaPredicted RBP23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 NT5DC2Q9H857 520 aa23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 C3orf14Q9HBI5 128 aa23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 PCDHGB6Q9Y5F9 930 aa23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 ANKDD1BA6NHY2 528 aa23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 PLPP1O14494 284 aa23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 ARHGAP33O14559 1287 aa23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 CAPN5O15484 640 aaPredicted RBP23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 SLITRK5O94991 958 aa23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 MNX1P50219 401 aaPredicted RBP23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 MANFP55145 182 aaKnown RBP23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 C12orf73Q69YU5 71 aa23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 CYP4Z2PQ8N1L4 340 aa23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 SCAIQ8N9R8 606 aa23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 FLCNQ8NFG4 579 aa23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 WDR36Q8NI36 951 aaKnown RBP23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 KLHL6Q8WZ60 621 aa23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 AIF1LQ9BQI0 150 aa23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 MS4A8Q9BY19 250 aa23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 ZNF717Q9BY31 904 aaPredicted RBP23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 PCBD2Q9H0N5 130 aa23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 RNF208Q9H0X6 261 aa23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 DYRK4Q9NR20 520 aa23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 ACAD8Q9UKU7 415 aa23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 ATP11BQ9Y2G3 1177 aa23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 KIF26AQ9ULI4 1882 aaPredicted RBP23.42■■□□□ 1.34
SYNGAP1-206ENST00000479510 K7ESM1 405 aa23.41■■□□□ 1.34
SYNGAP1-206ENST00000479510 HOXC11O43248 304 aaPredicted RBP23.41■■□□□ 1.34
SYNGAP1-206ENST00000479510 C6P13671 934 aa23.41■■□□□ 1.34
SYNGAP1-206ENST00000479510 CYP4F2P78329 520 aa23.41■■□□□ 1.34
SYNGAP1-206ENST00000479510 DCST1Q5T197 706 aa23.41■■□□□ 1.34
SYNGAP1-206ENST00000479510 C17orf64Q86WR6 236 aa23.41■■□□□ 1.34
SYNGAP1-206ENST00000479510 TM4SF18Q96CE8 201 aa23.41■■□□□ 1.34
SYNGAP1-206ENST00000479510 TMEM19Q96HH6 336 aa23.41■■□□□ 1.34
SYNGAP1-206ENST00000479510 ZNF607Q96SK3 696 aa23.41■■□□□ 1.34
SYNGAP1-206ENST00000479510 WASH6PQ9NQA3 447 aa23.41■■□□□ 1.34
SYNGAP1-206ENST00000479510 SLC6A14Q9UN76 642 aa23.41■■□□□ 1.34
SYNGAP1-206ENST00000479510 ASF1AQ9Y294 204 aa23.41■■□□□ 1.34
SYNGAP1-206ENST00000479510 TRBV4-1A0A0J9YWV2 114 aa23.4■■□□□ 1.34
SYNGAP1-206ENST00000479510 M0R129 80 aa23.4■■□□□ 1.34
SYNGAP1-206ENST00000479510 RPN2P04844 631 aa23.4■■□□□ 1.34
SYNGAP1-206ENST00000479510 CD72P21854 359 aa23.4■■□□□ 1.34
SYNGAP1-206ENST00000479510 BSGP35613 385 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms