RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 KCNJ2P63252 427 aa15.82■□□□□ 0.12
VIM-204ENST00000478746 STX4Q12846 297 aa15.82■□□□□ 0.12
VIM-204ENST00000478746 GPS1Q13098 491 aa15.82■□□□□ 0.12
VIM-204ENST00000478746 PIGGQ5H8A4 983 aa15.82■□□□□ 0.12
VIM-204ENST00000478746 LACC1Q8IV20 430 aa15.82■□□□□ 0.12
VIM-204ENST00000478746 KLHDC8AQ8IYD2 350 aa15.82■□□□□ 0.12
VIM-204ENST00000478746 MAIP1Q8WWC4 291 aa15.82■□□□□ 0.12
VIM-204ENST00000478746 NANOS1Q8WY41 292 aaKnown RBP15.82■□□□□ 0.12
VIM-204ENST00000478746 CCT6BQ92526 530 aa15.82■□□□□ 0.12
VIM-204ENST00000478746 KIAA1191Q96A73 305 aa15.82■□□□□ 0.12
VIM-204ENST00000478746 MS4A6EQ96DS6 147 aa15.82■□□□□ 0.12
VIM-204ENST00000478746 SLC6A15Q9H2J7 730 aa15.82■□□□□ 0.12
VIM-204ENST00000478746 ZNF703Q9H7S9 590 aaPredicted RBP15.82■□□□□ 0.12
VIM-204ENST00000478746 SLC22A14Q9Y267 594 aa15.82■□□□□ 0.12
VIM-204ENST00000478746 FREM3P0C091 2139 aa15.82■□□□□ 0.12
VIM-204ENST00000478746 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.81■□□□□ 0.12
VIM-204ENST00000478746 LRIT2A6NDA9 550 aa15.81■□□□□ 0.12
VIM-204ENST00000478746 C17orf105B2RV13 164 aa15.81■□□□□ 0.12
VIM-204ENST00000478746 GOLGA8MH3BSY2 632 aa15.81■□□□□ 0.12
VIM-204ENST00000478746 NCKAP5O14513 1909 aa15.81■□□□□ 0.12
VIM-204ENST00000478746 HNRNPH1P31943 449 aaKnown RBP15.81■□□□□ 0.12
VIM-204ENST00000478746 ZNF136P52737 540 aa15.81■□□□□ 0.12
VIM-204ENST00000478746 TBL3Q12788 808 aaKnown RBP15.81■□□□□ 0.12
VIM-204ENST00000478746 ASPHQ12797 758 aa15.81■□□□□ 0.12
VIM-204ENST00000478746 RCN2Q14257 317 aa15.81■□□□□ 0.12
VIM-204ENST00000478746 EFTUD2Q15029 972 aaKnown RBP eCLIP15.81■□□□□ 0.12
VIM-204ENST00000478746 MPEG1Q2M385 716 aa15.81■□□□□ 0.12
VIM-204ENST00000478746 ZNF791Q3KP31 576 aaPredicted RBP15.81■□□□□ 0.12
VIM-204ENST00000478746 ACSF3Q4G176 576 aaPredicted RBP15.81■□□□□ 0.12
VIM-204ENST00000478746 RBM20Q5T481 1227 aaKnown RBP15.81■□□□□ 0.12
VIM-204ENST00000478746 P3H2Q8IVL5 708 aa15.81■□□□□ 0.12
VIM-204ENST00000478746 C2CD4AQ8NCU7 369 aaPredicted RBP15.81■□□□□ 0.12
VIM-204ENST00000478746 SLC2A12Q8TD20 617 aa15.81■□□□□ 0.12
VIM-204ENST00000478746 COX4I2Q96KJ9 171 aa15.81■□□□□ 0.12
VIM-204ENST00000478746 RUNDC3BQ96NL0 473 aa15.81■□□□□ 0.12
VIM-204ENST00000478746 QRFPRQ96P65 431 aa15.81■□□□□ 0.12
VIM-204ENST00000478746 XAB2Q9HCS7 855 aaKnown RBP15.81■□□□□ 0.12
VIM-204ENST00000478746 QPCTLQ9NXS2 382 aa15.81■□□□□ 0.12
VIM-204ENST00000478746 FBN1P35555 2871 aaKnown RBP15.8■□□□□ 0.12
VIM-204ENST00000478746 C15orf38-AP3S2A0A0A6YYH1 394 aa15.8■□□□□ 0.12
VIM-204ENST00000478746 KDM4EB2RXH2 506 aaPredicted RBP15.8■□□□□ 0.12
VIM-204ENST00000478746 HRGP04196 525 aa15.8■□□□□ 0.12
VIM-204ENST00000478746 ENO2P09104 434 aaPredicted RBP15.8■□□□□ 0.12
VIM-204ENST00000478746 PLA2G16P53816 162 aa15.8■□□□□ 0.12
VIM-204ENST00000478746 LIM2P55344 173 aa15.8■□□□□ 0.12
VIM-204ENST00000478746 SORDQ00796 357 aa15.8■□□□□ 0.12
VIM-204ENST00000478746 PDAP1Q13442 181 aaKnown RBP15.8■□□□□ 0.12
VIM-204ENST00000478746 POU4F3Q15319 338 aa15.8■□□□□ 0.12
VIM-204ENST00000478746 SF3B4Q15427 424 aaKnown RBP eCLIP15.8■□□□□ 0.12
VIM-204ENST00000478746 PRAMEF20Q5VT98 475 aa15.8■□□□□ 0.12
VIM-204ENST00000478746 ADGRD1Q6QNK2 874 aa15.8■□□□□ 0.12
VIM-204ENST00000478746 CXorf67Q86X51 503 aaPredicted RBP15.8■□□□□ 0.12
VIM-204ENST00000478746 TMEM139Q8IV31 216 aa15.8■□□□□ 0.12
VIM-204ENST00000478746 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.8■□□□□ 0.12
VIM-204ENST00000478746 CIARTQ8N365 385 aaPredicted RBP15.8■□□□□ 0.12
VIM-204ENST00000478746 LRRC25Q8N386 305 aaPredicted RBP15.8■□□□□ 0.12
VIM-204ENST00000478746 MCUQ8NE86 351 aa15.8■□□□□ 0.12
VIM-204ENST00000478746 TTLQ8NG68 377 aa15.8■□□□□ 0.12
VIM-204ENST00000478746 PAQR8Q8TEZ7 354 aa15.8■□□□□ 0.12
VIM-204ENST00000478746 JSRP1Q96MG2 331 aaPredicted RBP15.8■□□□□ 0.12
VIM-204ENST00000478746 SERPINB12Q96P63 405 aa15.8■□□□□ 0.12
VIM-204ENST00000478746 SERINC2Q96SA4 455 aa15.8■□□□□ 0.12
VIM-204ENST00000478746 CSF3RQ99062 836 aa15.8■□□□□ 0.12
VIM-204ENST00000478746 SH2D2AQ9NP31 389 aa15.8■□□□□ 0.12
VIM-204ENST00000478746 COPS7AQ9UBW8 275 aa15.8■□□□□ 0.12
VIM-204ENST00000478746 DAPP1Q9UN19 280 aa15.8■□□□□ 0.12
VIM-204ENST00000478746 TLN2Q9Y4G6 2542 aa15.8■□□□□ 0.12
VIM-204ENST00000478746 HIVEP2P31629 2446 aa15.8■□□□□ 0.12
VIM-204ENST00000478746 ARID1AO14497 2285 aa15.8■□□□□ 0.12
VIM-204ENST00000478746 H7C1Q1 480 aa15.79■□□□□ 0.12
VIM-204ENST00000478746 FGGP02679 453 aa15.79■□□□□ 0.12
VIM-204ENST00000478746 C1GALT1C1LP0DN25 315 aa15.79■□□□□ 0.12
VIM-204ENST00000478746 GABRB3P28472 473 aa15.79■□□□□ 0.12
VIM-204ENST00000478746 AGFG1P52594 562 aaKnown RBP15.79■□□□□ 0.12
VIM-204ENST00000478746 PPP2R2BQ00005 443 aa15.79■□□□□ 0.12
VIM-204ENST00000478746 DUSP8Q13202 625 aa15.79■□□□□ 0.12
VIM-204ENST00000478746 SERTAD2Q14140 314 aa15.79■□□□□ 0.12
VIM-204ENST00000478746 Q5PR19 223 aa15.79■□□□□ 0.12
VIM-204ENST00000478746 TMIGD1Q6UXZ0 262 aa15.79■□□□□ 0.12
VIM-204ENST00000478746 VWA5B2Q8N398 1253 aa15.79■□□□□ 0.12
VIM-204ENST00000478746 SIMC1Q8NDZ2 872 aa15.79■□□□□ 0.12
VIM-204ENST00000478746 GABPB2Q8TAK5 448 aaPredicted RBP15.79■□□□□ 0.12
VIM-204ENST00000478746 SLC22A8Q8TCC7 542 aa15.79■□□□□ 0.12
VIM-204ENST00000478746 HSPBAP1Q96EW2 488 aa15.79■□□□□ 0.12
VIM-204ENST00000478746 SIGLEC10Q96LC7 697 aa15.79■□□□□ 0.12
VIM-204ENST00000478746 TIMP4Q99727 224 aa15.79■□□□□ 0.12
VIM-204ENST00000478746 BDH2Q9BUT1 245 aa15.79■□□□□ 0.12
VIM-204ENST00000478746 PROK2Q9HC23 129 aa15.79■□□□□ 0.12
VIM-204ENST00000478746 HOMER3Q9NSC5 361 aa15.79■□□□□ 0.12
VIM-204ENST00000478746 LRRC3CA6NJW4 275 aa15.78■□□□□ 0.12
VIM-204ENST00000478746 EEF1E1-BLOC1S5C9J1V9 151 aa15.78■□□□□ 0.12
VIM-204ENST00000478746 CES2O00748 559 aa15.78■□□□□ 0.12
VIM-204ENST00000478746 SMAD7O15105 426 aaKnown RBP15.78■□□□□ 0.12
VIM-204ENST00000478746 EEF1E1O43324 174 aaKnown RBP15.78■□□□□ 0.12
VIM-204ENST00000478746 LDB3O75112 727 aa15.78■□□□□ 0.12
VIM-204ENST00000478746 ETHE1O95571 254 aa15.78■□□□□ 0.12
VIM-204ENST00000478746 KRT14P02533 472 aa15.78■□□□□ 0.12
VIM-204ENST00000478746 AHSGP02765 367 aa15.78■□□□□ 0.12
VIM-204ENST00000478746 CTSSP25774 331 aa15.78■□□□□ 0.12
VIM-204ENST00000478746 HPDP32754 393 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms