RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 CSF3RQ99062 836 aa13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 TRIM8Q9BZR9 551 aa13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 PRDM7Q9NQW5 492 aa13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 SACM1LQ9NTJ5 587 aa13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 ZNF223Q9UK11 482 aaPredicted RBP13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 ZNF490Q9ULM2 529 aaPredicted RBP13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 ACOT9Q9Y305 439 aa13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 PCDHGA11Q9Y5H2 935 aa13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 CRYBG3Q68DQ2 2970 aa13.42□□□□□ -0.26
SMARCE1-209ENST00000478349 OR14I1A6ND48 311 aa13.41□□□□□ -0.26
SMARCE1-209ENST00000478349 FAM47E-STBD1D6RA91 191 aa13.41□□□□□ -0.26
SMARCE1-209ENST00000478349 WWP2O00308 870 aa13.41□□□□□ -0.26
SMARCE1-209ENST00000478349 PIAS1O75925 651 aa13.41□□□□□ -0.26
SMARCE1-209ENST00000478349 P04436 131 aa13.41□□□□□ -0.26
SMARCE1-209ENST00000478349 SLC35E2BP0CK96 405 aa13.41□□□□□ -0.26
SMARCE1-209ENST00000478349 CASQ1P31415 396 aa13.41□□□□□ -0.26
SMARCE1-209ENST00000478349 RFC3P40938 356 aa13.41□□□□□ -0.26
SMARCE1-209ENST00000478349 SOX3P41225 446 aa13.41□□□□□ -0.26
SMARCE1-209ENST00000478349 PIK3CBP42338 1070 aa13.41□□□□□ -0.26
SMARCE1-209ENST00000478349 HK2P52789 917 aa13.41□□□□□ -0.26
SMARCE1-209ENST00000478349 RNF4P78317 190 aa13.41□□□□□ -0.26
SMARCE1-209ENST00000478349 PCDH1Q08174 1060 aa13.41□□□□□ -0.26
SMARCE1-209ENST00000478349 FBXO48Q5FWF7 155 aa13.41□□□□□ -0.26
SMARCE1-209ENST00000478349 GRHL2Q6ISB3 625 aa13.41□□□□□ -0.26
SMARCE1-209ENST00000478349 C3P1Q6ZMU1 363 aa13.41□□□□□ -0.26
SMARCE1-209ENST00000478349 FAM109AQ8N4B1 249 aa13.41□□□□□ -0.26
SMARCE1-209ENST00000478349 TMEM52Q8NDY8 209 aa13.41□□□□□ -0.26
SMARCE1-209ENST00000478349 OR2M7Q8NG81 312 aa13.41□□□□□ -0.26
SMARCE1-209ENST00000478349 RHEBL1Q8TAI7 183 aa13.41□□□□□ -0.26
SMARCE1-209ENST00000478349 PTPMT1Q8WUK0 201 aaPredicted RBP13.41□□□□□ -0.26
SMARCE1-209ENST00000478349 TANKQ92844 425 aa13.41□□□□□ -0.26
SMARCE1-209ENST00000478349 ESAMQ96AP7 390 aa13.41□□□□□ -0.26
SMARCE1-209ENST00000478349 RGMAQ96B86 450 aa13.41□□□□□ -0.26
SMARCE1-209ENST00000478349 ACTR8Q9H981 624 aa13.41□□□□□ -0.26
SMARCE1-209ENST00000478349 WDR41Q9HAD4 459 aa13.41□□□□□ -0.26
SMARCE1-209ENST00000478349 PLSCR2Q9NRY7 297 aa13.41□□□□□ -0.26
SMARCE1-209ENST00000478349 GRHL1Q9NZI5 618 aa13.41□□□□□ -0.26
SMARCE1-209ENST00000478349 CLDN16Q9Y5I7 305 aa13.41□□□□□ -0.26
SMARCE1-209ENST00000478349 TNPO3Q9Y5L0 923 aaKnown RBP13.41□□□□□ -0.26
SMARCE1-209ENST00000478349 CACNA1DQ01668 2161 aa13.41□□□□□ -0.26
SMARCE1-209ENST00000478349 SCN3AQ9NY46 2000 aa13.4□□□□□ -0.26
SMARCE1-209ENST00000478349 LRBAP50851 2863 aa13.4□□□□□ -0.26
SMARCE1-209ENST00000478349 TGFBR3LH3BV60 316 aa13.4□□□□□ -0.26
SMARCE1-209ENST00000478349 UGDHO60701 494 aa13.4□□□□□ -0.26
SMARCE1-209ENST00000478349 WISP2O76076 250 aa13.4□□□□□ -0.26
SMARCE1-209ENST00000478349 OR6B1O95007 311 aa13.4□□□□□ -0.26
SMARCE1-209ENST00000478349 GFAPP14136 432 aa13.4□□□□□ -0.26
SMARCE1-209ENST00000478349 CD22P20273 847 aa13.4□□□□□ -0.26
SMARCE1-209ENST00000478349 CNR1P21554 472 aa13.4□□□□□ -0.26
SMARCE1-209ENST00000478349 PHBP35232 272 aa13.4□□□□□ -0.26
SMARCE1-209ENST00000478349 MAGEA4P43358 317 aa13.4□□□□□ -0.26
SMARCE1-209ENST00000478349 STT3AP46977 705 aa13.4□□□□□ -0.26
SMARCE1-209ENST00000478349 CKAP4Q07065 602 aaKnown RBP13.4□□□□□ -0.26
SMARCE1-209ENST00000478349 MPEG1Q2M385 716 aa13.4□□□□□ -0.26
SMARCE1-209ENST00000478349 LIPJQ5W064 366 aa13.4□□□□□ -0.26
SMARCE1-209ENST00000478349 OR4C11Q6IEV9 310 aa13.4□□□□□ -0.26
SMARCE1-209ENST00000478349 METTL2BQ6P1Q9 378 aaKnown RBP13.4□□□□□ -0.26
SMARCE1-209ENST00000478349 FAM47EQ6ZV65 393 aa13.4□□□□□ -0.26
SMARCE1-209ENST00000478349 ISCA2Q86U28 154 aa13.4□□□□□ -0.26
SMARCE1-209ENST00000478349 CHERPQ8IWX8 916 aaKnown RBP13.4□□□□□ -0.26
SMARCE1-209ENST00000478349 OR7G3Q8NG95 312 aa13.4□□□□□ -0.26
SMARCE1-209ENST00000478349 OR5M3Q8NGP4 307 aa13.4□□□□□ -0.26
SMARCE1-209ENST00000478349 NUBPLQ8TB37 319 aa13.4□□□□□ -0.26
SMARCE1-209ENST00000478349 FBF1Q8TES7 1133 aa13.4□□□□□ -0.26
SMARCE1-209ENST00000478349 MAPKAP1Q9BPZ7 522 aa13.4□□□□□ -0.26
SMARCE1-209ENST00000478349 RPF2Q9H7B2 306 aaKnown RBP13.4□□□□□ -0.26
SMARCE1-209ENST00000478349 ZDHHC11Q9H8X9 412 aa13.4□□□□□ -0.26
SMARCE1-209ENST00000478349 IL1RL2Q9HB29 575 aa13.4□□□□□ -0.26
SMARCE1-209ENST00000478349 LYARQ9NX58 379 aaKnown RBP13.4□□□□□ -0.26
SMARCE1-209ENST00000478349 TSC22D4Q9Y3Q8 395 aa13.4□□□□□ -0.26
SMARCE1-209ENST00000478349 FAM166BA8MTA8 275 aa13.39□□□□□ -0.27
SMARCE1-209ENST00000478349 UBXN8O00124 270 aa13.39□□□□□ -0.27
SMARCE1-209ENST00000478349 ADAM10O14672 748 aa13.39□□□□□ -0.27
SMARCE1-209ENST00000478349 LDB3O75112 727 aa13.39□□□□□ -0.27
SMARCE1-209ENST00000478349 TBX6O95947 436 aaPredicted RBP13.39□□□□□ -0.27
SMARCE1-209ENST00000478349 TGFB1P01137 390 aa13.39□□□□□ -0.27
SMARCE1-209ENST00000478349 PTX3P26022 381 aaPredicted RBP13.39□□□□□ -0.27
SMARCE1-209ENST00000478349 GPX6P59796 221 aa13.39□□□□□ -0.27
SMARCE1-209ENST00000478349 MRPS25P82663 173 aaKnown RBP13.39□□□□□ -0.27
SMARCE1-209ENST00000478349 TNFRSF17Q02223 184 aa13.39□□□□□ -0.27
SMARCE1-209ENST00000478349 C2orf54Q08AI8 447 aa13.39□□□□□ -0.27
SMARCE1-209ENST00000478349 DDX39BQ13838 428 aaKnown RBP13.39□□□□□ -0.27
SMARCE1-209ENST00000478349 C10orf62Q5T681 223 aaPredicted RBP13.39□□□□□ -0.27
SMARCE1-209ENST00000478349 DEPDC1Q5TB30 811 aa13.39□□□□□ -0.27
SMARCE1-209ENST00000478349 C6orf163Q5TEZ5 329 aa13.39□□□□□ -0.27
SMARCE1-209ENST00000478349 ADNP2Q6IQ32 1131 aa13.39□□□□□ -0.27
SMARCE1-209ENST00000478349 MEX3BQ6ZN04 569 aaKnown RBP13.39□□□□□ -0.27
SMARCE1-209ENST00000478349 ZNF793Q6ZN11 406 aa13.39□□□□□ -0.27
SMARCE1-209ENST00000478349 TAOK1Q7L7X3 1001 aa13.39□□□□□ -0.27
SMARCE1-209ENST00000478349 SLC29A4Q7RTT9 530 aa13.39□□□□□ -0.27
SMARCE1-209ENST00000478349 FGD2Q7Z6J4 655 aa13.39□□□□□ -0.27
SMARCE1-209ENST00000478349 CMC1Q7Z7K0 106 aa13.39□□□□□ -0.27
SMARCE1-209ENST00000478349 GPR180Q86V85 440 aa13.39□□□□□ -0.27
SMARCE1-209ENST00000478349 ZCCHC7Q8N3Z6 543 aaKnown RBP13.39□□□□□ -0.27
SMARCE1-209ENST00000478349 SLC15A4Q8N697 577 aa13.39□□□□□ -0.27
SMARCE1-209ENST00000478349 TEX9Q8N6V9 391 aa13.39□□□□□ -0.27
SMARCE1-209ENST00000478349 FBXO25Q8TCJ0 367 aa13.39□□□□□ -0.27
SMARCE1-209ENST00000478349 SMC6Q96SB8 1091 aa13.39□□□□□ -0.27
SMARCE1-209ENST00000478349 ATOH8Q96SQ7 321 aa13.39□□□□□ -0.27
SMARCE1-209ENST00000478349 TTTY12Q9BZ98 90 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms