RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 SOAT1P35610 550 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 ENTPD1P49961 510 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 DLX2Q07687 328 aaPredicted RBP11.6□□□□□ -0.55
PTPRF-212ENST00000477970 SYCE2Q6PIF2 218 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 SLC5A8Q8N695 610 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 ZNF513Q8N8E2 541 aaPredicted RBP11.6□□□□□ -0.55
PTPRF-212ENST00000477970 FNDC8Q8TC99 324 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 PPP1R14BQ96C90 147 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 FERD3LQ96RJ6 166 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 MAPKAP1Q9BPZ7 522 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 SERGEFQ9UGK8 458 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 HCN4Q9Y3Q4 1203 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 TESMINQ9Y4I5 508 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 HEBP2Q9Y5Z4 205 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 IGKV1-8A0A0C4DH67 115 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 PRAMEF33A0A0G2JMD5 474 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 PTGES3LE9PB15 166 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 K7EQS6 105 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 PRAMEF10O60809 474 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 FAM20BO75063 409 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 OXSR1O95747 527 aaPredicted RBP11.6□□□□□ -0.55
PTPRF-212ENST00000477970 EXOC3L2Q2M3D2 409 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 LGI4Q8N135 537 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 ZNF540Q8NDQ6 660 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 OR5AK3PQ8NH89 298 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 SFXN5Q8TD22 340 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 TRUB1Q8WWH5 349 aaKnown RBP11.6□□□□□ -0.55
PTPRF-212ENST00000477970 C12orf66Q96MD2 445 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 NECTIN4Q96NY8 510 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 KIR3DX1Q9H7L2 352 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 PSORS1C1Q9UIG5 152 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 A0A0J9YVX5 310 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 A0A1W2PP55 124 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 OR2A25A4D2G3 310 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 LRIT2A6NDA9 550 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 CLDN24A6NM45 220 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 H7BY64 318 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 FUCA1P04066 466 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 IFNW1P05000 195 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 EPHA2P29317 976 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 MASP1P48740 699 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 MANFP55145 182 aaKnown RBP11.6□□□□□ -0.55
PTPRF-212ENST00000477970 PIGFQ07326 219 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 TBCEQ15813 527 aaPredicted RBP11.6□□□□□ -0.55
PTPRF-212ENST00000477970 ZNF770Q6IQ21 691 aaPredicted RBP11.6□□□□□ -0.55
PTPRF-212ENST00000477970 PTCRAQ6ISU1 281 aaPredicted RBP11.6□□□□□ -0.55
PTPRF-212ENST00000477970 CEACAM20Q6UY09 585 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 MMP21Q8N119 569 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 HORMAD2Q8N7B1 307 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 VMP1Q96GC9 406 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 PRAP1Q96NZ9 151 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 ACAT2Q9BWD1 397 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 IGFLR1Q9H665 355 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 ACAD8Q9UKU7 415 aa11.6□□□□□ -0.55
PTPRF-212ENST00000477970 DSPPQ9NZW4 1301 aa11.59□□□□□ -0.55
PTPRF-212ENST00000477970 TMX2-CTNND1H3BSU7 103 aa11.59□□□□□ -0.55
PTPRF-212ENST00000477970 TMPRSS11DO60235 418 aa11.59□□□□□ -0.55
PTPRF-212ENST00000477970 MPZL2O60487 215 aa11.59□□□□□ -0.55
PTPRF-212ENST00000477970 CCNB2O95067 398 aa11.59□□□□□ -0.55
PTPRF-212ENST00000477970 MFN2O95140 757 aa11.59□□□□□ -0.55
PTPRF-212ENST00000477970 MT-ND2P03891 347 aa11.59□□□□□ -0.55
PTPRF-212ENST00000477970 OPN1SWP03999 348 aa11.59□□□□□ -0.55
PTPRF-212ENST00000477970 ZNF182P17025 639 aaPredicted RBP11.59□□□□□ -0.55
PTPRF-212ENST00000477970 PSMB5P28074 263 aa11.59□□□□□ -0.55
PTPRF-212ENST00000477970 KIAA1024LP59773 190 aa11.59□□□□□ -0.55
PTPRF-212ENST00000477970 TFF2Q03403 129 aa11.59□□□□□ -0.55
PTPRF-212ENST00000477970 AQP6Q13520 282 aa11.59□□□□□ -0.55
PTPRF-212ENST00000477970 CLCA4Q14CN2 919 aa11.59□□□□□ -0.55
PTPRF-212ENST00000477970 UAP1L1Q3KQV9 507 aa11.59□□□□□ -0.55
PTPRF-212ENST00000477970 PRAMEF8Q5VWM4 474 aa11.59□□□□□ -0.55
PTPRF-212ENST00000477970 PRAMEF7Q5VXH5 474 aa11.59□□□□□ -0.55
PTPRF-212ENST00000477970 MRM1Q6IN84 353 aaKnown RBP11.59□□□□□ -0.55
PTPRF-212ENST00000477970 SLC38A5Q8WUX1 472 aa11.59□□□□□ -0.55
PTPRF-212ENST00000477970 MOAP1Q96BY2 351 aa11.59□□□□□ -0.55
PTPRF-212ENST00000477970 MYADMQ96S97 322 aa11.59□□□□□ -0.55
PTPRF-212ENST00000477970 FAIM2Q9BWQ8 316 aa11.59□□□□□ -0.55
PTPRF-212ENST00000477970 NDOR1Q9UHB4 597 aa11.59□□□□□ -0.55
PTPRF-212ENST00000477970 OR1A2Q9Y585 309 aa11.59□□□□□ -0.55
PTPRF-212ENST00000477970 TRPM6Q9BX84 2022 aa11.59□□□□□ -0.55
PTPRF-212ENST00000477970 OR1F1O43749 312 aa11.59□□□□□ -0.55
PTPRF-212ENST00000477970 IGFALSP35858 605 aa11.59□□□□□ -0.55
PTPRF-212ENST00000477970 CDH12P55289 794 aa11.59□□□□□ -0.55
PTPRF-212ENST00000477970 IL1RL1Q01638 556 aa11.59□□□□□ -0.55
PTPRF-212ENST00000477970 SGCGQ13326 291 aa11.59□□□□□ -0.55
PTPRF-212ENST00000477970 MAPK11Q15759 364 aa11.59□□□□□ -0.55
PTPRF-212ENST00000477970 WASH2PQ6VEQ5 465 aa11.59□□□□□ -0.55
PTPRF-212ENST00000477970 C6orf120Q7Z4R8 191 aa11.59□□□□□ -0.55
PTPRF-212ENST00000477970 MYDGFQ969H8 173 aa11.59□□□□□ -0.55
PTPRF-212ENST00000477970 DGCR6LQ9BY27 220 aa11.59□□□□□ -0.55
PTPRF-212ENST00000477970 SLC17A9Q9BYT1 436 aa11.59□□□□□ -0.55
PTPRF-212ENST00000477970 TBCCD1Q9NVR7 557 aa11.59□□□□□ -0.55
PTPRF-212ENST00000477970 WARS2Q9UGM6 360 aaKnown RBP11.59□□□□□ -0.55
PTPRF-212ENST00000477970 FAM32AQ9Y421 112 aaKnown RBP11.59□□□□□ -0.55
PTPRF-212ENST00000477970 FEZF1A0PJY2 475 aa11.58□□□□□ -0.55
PTPRF-212ENST00000477970 ANTXRLA6NF34 631 aa11.58□□□□□ -0.55
PTPRF-212ENST00000477970 GUCY1B2O75343 617 aa11.58□□□□□ -0.55
PTPRF-212ENST00000477970 ACP5P13686 325 aa11.58□□□□□ -0.55
PTPRF-212ENST00000477970 GRK3P35626 688 aa11.58□□□□□ -0.55
PTPRF-212ENST00000477970 ST13P50502 369 aaKnown RBP11.58□□□□□ -0.55
PTPRF-212ENST00000477970 COLEC12Q5KU26 742 aa11.58□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms