RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 TIMP3P35625 211 aa4.25□□□□□ -1.73
VPS50-214ENST00000477935 ARCN1P48444 511 aaKnown RBP4.25□□□□□ -1.73
VPS50-214ENST00000477935 ACOT2P49753 483 aa4.25□□□□□ -1.73
VPS50-214ENST00000477935 GEMIN4P57678 1058 aaKnown RBP4.25□□□□□ -1.73
VPS50-214ENST00000477935 EVCP57679 992 aa4.25□□□□□ -1.73
VPS50-214ENST00000477935 LINC01547P58512 204 aaPredicted RBP4.25□□□□□ -1.73
VPS50-214ENST00000477935 LRMPQ12912 555 aa4.25□□□□□ -1.73
VPS50-214ENST00000477935 GAGE5Q13069 117 aa4.25□□□□□ -1.73
VPS50-214ENST00000477935 GAGE6Q13070 117 aa4.25□□□□□ -1.73
VPS50-214ENST00000477935 ART3Q13508 389 aa4.25□□□□□ -1.73
VPS50-214ENST00000477935 RBM39Q14498 530 aaKnown RBP4.25□□□□□ -1.73
VPS50-214ENST00000477935 CLPPQ16740 277 aaPredicted RBP4.25□□□□□ -1.73
VPS50-214ENST00000477935 C9orf64Q5T6V5 341 aa4.25□□□□□ -1.73
VPS50-214ENST00000477935 GKAP1Q5VSY0 366 aaPredicted RBP4.25□□□□□ -1.73
VPS50-214ENST00000477935 FAM46CQ5VWP2 391 aa4.25□□□□□ -1.73
VPS50-214ENST00000477935 ADALQ6DHV7 355 aa4.25□□□□□ -1.73
VPS50-214ENST00000477935 ZNF449Q6P9G9 518 aa4.25□□□□□ -1.73
VPS50-214ENST00000477935 C1orf186Q6ZWK4 172 aa4.25□□□□□ -1.73
VPS50-214ENST00000477935 ABI3BPQ7Z7G0 1075 aa4.25□□□□□ -1.73
VPS50-214ENST00000477935 TSPAN33Q86UF1 283 aa4.25□□□□□ -1.73
VPS50-214ENST00000477935 PARGQ86W56 976 aa4.25□□□□□ -1.73
VPS50-214ENST00000477935 RASGEF1CQ8N431 466 aa4.25□□□□□ -1.73
VPS50-214ENST00000477935 CSGALNACT2Q8N6G5 542 aa4.25□□□□□ -1.73
VPS50-214ENST00000477935 TMA16Q96EY4 203 aaKnown RBP4.25□□□□□ -1.73
VPS50-214ENST00000477935 TCEANC2Q96MN5 208 aa4.25□□□□□ -1.73
VPS50-214ENST00000477935 DDA1Q9BW61 102 aa4.25□□□□□ -1.73
VPS50-214ENST00000477935 CALN1Q9BXU9 219 aa4.25□□□□□ -1.73
VPS50-214ENST00000477935 LRRN3Q9H3W5 708 aa4.25□□□□□ -1.73
VPS50-214ENST00000477935 SYNDIG1Q9H7V2 258 aa4.25□□□□□ -1.73
VPS50-214ENST00000477935 DMAP1Q9NPF5 467 aaPredicted RBP4.25□□□□□ -1.73
VPS50-214ENST00000477935 KLHL9Q9P2J3 617 aa4.25□□□□□ -1.73
VPS50-214ENST00000477935 GGA2Q9UJY4 613 aa4.25□□□□□ -1.73
VPS50-214ENST00000477935 CORO1CQ9ULV4 474 aaPredicted RBP4.25□□□□□ -1.73
VPS50-214ENST00000477935 CLEC4EQ9ULY5 219 aa4.25□□□□□ -1.73
VPS50-214ENST00000477935 KCNJ14Q9UNX9 436 aa4.25□□□□□ -1.73
VPS50-214ENST00000477935 MTMR6Q9Y217 621 aa4.25□□□□□ -1.73
VPS50-214ENST00000477935 IGLV5-45A0A087WSX0 123 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 A0A087X0M5 115 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 A0A1B0GX30 115 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 ANKUB1A6NFN9 424 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 FAM72CH0Y354 149 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 TMEM178BH3BS89 294 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 MAP2K7O14733 419 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 SLC31A1O15431 190 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 ZW10O43264 779 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 RAD1O60671 282 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 IL1BP01584 269 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 IGHV4-39P01824 125 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 RPLP0P05388 317 aaKnown RBP4.24□□□□□ -1.73
VPS50-214ENST00000477935 SRPRAP08240 638 aaKnown RBP4.24□□□□□ -1.73
VPS50-214ENST00000477935 KRT19P08727 400 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 PRKAR1AP10644 381 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 RALAP11233 206 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 NR1D1P20393 614 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 HNRNPA2B1P22626 353 aaKnown RBP4.24□□□□□ -1.73
VPS50-214ENST00000477935 ACADLP28330 430 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 OAS2P29728 719 aaKnown RBP4.24□□□□□ -1.73
VPS50-214ENST00000477935 CCT6AP40227 531 aaKnown RBP4.24□□□□□ -1.73
VPS50-214ENST00000477935 NNMTP40261 264 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 ETV5P41161 510 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 RABIFP47224 123 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 GLIPR1P48060 266 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 CCL7P80098 99 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 TFAMQ00059 246 aaKnown RBP4.24□□□□□ -1.73
VPS50-214ENST00000477935 ORC2Q13416 577 aaPredicted RBP4.24□□□□□ -1.73
VPS50-214ENST00000477935 ELAVL3Q14576 367 aaKnown RBP4.24□□□□□ -1.73
VPS50-214ENST00000477935 DEFB133Q30KQ1 61 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 POM121L1PQ3SYA9 428 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 C14orf28Q4W4Y0 310 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 MDH1BQ5I0G3 518 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 C10orf120Q5SQS8 335 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 CCNYL2Q5T2Q4 361 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 MPP7Q5T2T1 576 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 FAM72AQ5TYM5 149 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 FAAH2Q6GMR7 532 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 FAM72DQ6L9T8 149 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 Q6ZSR6 202 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 Q75L30 129 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 ZSCAN30Q86W11 494 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 FAM72BQ86X60 149 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 APLFQ8IW19 511 aaPredicted RBP4.24□□□□□ -1.73
VPS50-214ENST00000477935 PM20D2Q8IYS1 436 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 EMC1Q8N766 993 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 ARL10Q8N8L6 244 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 SLC38A9Q8NBW4 561 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 PPHLN1Q8NEY8 458 aaKnown RBP4.24□□□□□ -1.73
VPS50-214ENST00000477935 LMX1AQ8TE12 382 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 HDAC2Q92769 488 aaKnown RBP4.24□□□□□ -1.73
VPS50-214ENST00000477935 ELMOD3Q96FG2 381 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 KCNK16Q96T55 309 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 ITPAQ9BY32 194 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 RAB34Q9BZG1 259 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 SNX25Q9H3E2 840 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 ABCB8Q9NUT2 735 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 DDX19AQ9NUU7 478 aaKnown RBP4.24□□□□□ -1.73
VPS50-214ENST00000477935 CLIC5Q9NZA1 410 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 APPL1Q9UKG1 709 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 SCML2Q9UQR0 700 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 TCF19Q9Y242 345 aa4.24□□□□□ -1.73
VPS50-214ENST00000477935 TMEM184BQ9Y519 407 aaPredicted RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms