RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 KCNJ13O60928 360 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 RNGTTO60942 597 aaKnown RBP13.98□□□□□ -0.17
HDAC6-220ENST00000477528 DUX4L2P0CJ85 424 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 DUX4L3P0CJ86 424 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 DUX4L4P0CJ87 422 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 DUX4L5P0CJ88 424 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 DUX4L6P0CJ89 424 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 DUX4L7P0CJ90 424 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 AGXTP21549 392 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 ITPKBP27987 946 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 STAT5AP42229 794 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 RNF175Q8N4F7 328 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 OR8J1Q8NGP2 316 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 OR2L2Q8NH16 312 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 MYLIPQ8WY64 445 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 TSSK6Q9BXA6 273 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 DUX4Q9UBX2 424 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 MKLN1Q9UL63 735 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 EMC8O43402 210 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 B4GAT1O43505 415 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 TMEM236Q5W0B7 351 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 ANKRD33Q7Z3H0 272 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 OR8J2Q8NGG1 315 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 SUN3Q8TAQ9 357 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 GNPDA2Q8TDQ7 276 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 HCAR2Q8TDS4 363 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 SNX33Q8WV41 574 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 CIDECQ96AQ7 238 aaPredicted RBP13.98□□□□□ -0.17
HDAC6-220ENST00000477528 ARMC5Q96C12 935 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 FAM210AQ96ND0 272 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 ZNF300Q96RE9 604 aaPredicted RBP13.98□□□□□ -0.17
HDAC6-220ENST00000477528 LYSMD1Q96S90 227 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 ADAP00813 363 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 CRHBPP24387 322 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 RPS3AP61247 264 aaKnown RBP13.98□□□□□ -0.17
HDAC6-220ENST00000477528 CARTPTQ16568 116 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 MICAQ29983 383 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 EOGTQ5NDL2 527 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 SLC36A4Q6YBV0 504 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 JAZF1Q86VZ6 243 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 CHDHQ8NE62 594 aaPredicted RBP13.98□□□□□ -0.17
HDAC6-220ENST00000477528 DENND6BQ8NEG7 585 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 OR4K14Q8NGD5 310 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 SLC38A3Q99624 504 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 FAM83CQ9BQN1 747 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 RACGAP1Q9H0H5 632 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 SEC14L4Q9UDX3 406 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 ZNF221Q9UK13 617 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 STON1Q9Y6Q2 735 aa13.98□□□□□ -0.17
HDAC6-220ENST00000477528 ANHXE9PGG2 379 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 PLOD2O00469 737 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 JRKO75564 520 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 STSP08842 583 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 ALPPL2P10696 532 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 ITIH1P19827 911 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 CDH11P55287 796 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 ARHGAP19Q14CB8 494 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 ZSWIM7Q19AV6 140 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 BICRALQ6AI39 1079 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 TMEM151AQ8N4L1 468 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 OR1A2Q9Y585 309 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 HIDE1A8MVS5 230 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 NPC1O15118 1278 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 RCBTB2O95199 551 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 TNFRSF1BP20333 461 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 SRP54P61011 504 aaKnown RBP13.97□□□□□ -0.17
HDAC6-220ENST00000477528 PRRT3Q5FWE3 981 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 DLEU7Q6UYE1 221 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 ZNF765Q7L2R6 523 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 ASPGQ86U10 573 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 WDR48Q8TAF3 677 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 TNFRSF10DQ9UBN6 386 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 POLR1DQ9Y2S0 133 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 CHURC1-FNTBB4DL54 471 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 CXCL10P02778 98 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 DDCP20711 480 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 SLC5A2P31639 672 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 RAB30Q15771 203 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 NDUFAF6Q330K2 333 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 CCSAPQ6IQ19 270 aaPredicted RBP13.97□□□□□ -0.17
HDAC6-220ENST00000477528 OSTF1Q92882 214 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 MCHR1Q99705 422 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 GMEB1Q9Y692 573 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 DNMT3AQ9Y6K1 912 aaPredicted RBP13.97□□□□□ -0.17
HDAC6-220ENST00000477528 FAM155AB1AL88 458 aaPredicted RBP13.97□□□□□ -0.17
HDAC6-220ENST00000477528 FZD6O60353 706 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 COQ9O75208 318 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 RAB36O95755 333 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 LHCGRP22888 699 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 ALG11Q2TAA5 492 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 ZNF691Q5VV52 312 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 VRK3Q8IV63 474 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 NUP43Q8NFH3 380 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 TMEM203Q969S6 136 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 WDR92Q96MX6 357 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 UHRF1Q96T88 793 aaPredicted RBP13.97□□□□□ -0.17
HDAC6-220ENST00000477528 TMEM184CQ9NVA4 438 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 NLGN3Q9NZ94 848 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 ABCG2Q9UNQ0 655 aa13.97□□□□□ -0.17
HDAC6-220ENST00000477528 IFT52Q9Y366 437 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms