RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520		M0R233	179 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	FXYD1	O00168	92 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	SLC28A1	O00337	649 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	PHYH	O14832	338 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	MSH4	O15457	936 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	CHMP2A	O43633	222 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	DLX3	O60479	287 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	EIF1B	O60739	113 aa	Known RBP	4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	PMPCB	O75439	489 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	SC5D	O75845	299 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	POP4	O95707	220 aa	Known RBP	4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	SERPINA1	P01009	418 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	CRYAB	P02511	175 aa	Known RBP	4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	C4BPA	P04003	597 aa	Known RBP	4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	DNTT	P04053	509 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	FGF2	P09038	288 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	CSF3	P09919	207 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	ACSM4	P0C7M7	580 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	IFI30	P13284	250 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	HPGD	P15428	266 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	CD1E	P15812	388 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	ARSB	P15848	533 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	GGT1	P19440	569 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	POU3F3	P20264	500 aa	Predicted RBP	4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	CYP2B6	P20813	491 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	LHCGR	P22888	699 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	XPA	P23025	273 aa	Predicted RBP	4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	GADD45A	P24522	165 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	IGFBP5	P24593	272 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	PSMA1	P25786	263 aa	Known RBP	4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	MAPK3	P27361	379 aa	Predicted RBP	4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	OXTR	P30559	389 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	ADRA1B	P35368	520 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	DCT	P40126	519 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	EIF2S3	P41091	472 aa	Known RBP	4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	EIF1	P41567	113 aa	Known RBP	4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	KCNJ5	P48544	419 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	MASP1	P48740	699 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	INPP1	P49441	399 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	GLUD2	P49448	558 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	FLT3LG	P49771	235 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	KCNQ1	P51787	676 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	AKR1D1	P51857	326 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	ACLY	P53396	1101 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	CDH6	P55285	790 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	RAB10	P61026	200 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	LSM3	P62310	102 aa	Known RBP	4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	ERVK-8	P63133	956 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	DYNLT1	P63172	113 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	CSTF1	Q05048	431 aa	Known RBP	4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	TP53BP2	Q13625	1128 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	EXOSC2	Q13868	293 aa	Known RBP	4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	DGCR6	Q14129	220 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	RCAN2	Q14206	197 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	STXBP2	Q15833	593 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	WSCD2	Q2TBF2	565 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	AP5B1	Q2VPB7	878 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	INO80D	Q53TQ3	878 aa	Predicted RBP	4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	RABL3	Q5HYI8	236 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	EMC4	Q5J8M3	183 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	NHLRC3	Q5JS37	347 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	CDKL4	Q5MAI5	379 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	DNLZ	Q5SXM8	178 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	FNDC7	Q5VTL7	733 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	KIAA1614	Q5VZ46	1190 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	RAP1GAP2	Q684P5	730 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	JADE1	Q6IE81	842 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	LAIR2	Q6ISS4	152 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	EFCAB12	Q6NXP0	572 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	SCYL2	Q6P3W7	929 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	MZT2A	Q6P582	158 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	ERICH5	Q6P6B1	374 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	TBPL2	Q6SJ96	375 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	AFTPH	Q6ULP2	937 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	PCSK4	Q6UW60	755 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	RASSF6	Q6ZTQ3	369 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	FAM92B	Q6ZTR7	304 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	PDZD4	Q76G19	769 aa	Predicted RBP	4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	SHF	Q7M4L6	423 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	FGD2	Q7Z6J4	655 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	PIGZ	Q86VD9	579 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	FUNDC1	Q8IVP5	155 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	DENND6A	Q8IWF6	608 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	ADGRF3	Q8IZF5	1079 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	FSTL5	Q8N475	847 aa	Predicted RBP	4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	ATPAF2	Q8N5M1	289 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	EFHB	Q8N7U6	833 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	SLC37A3	Q8NCC5	494 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	RDM1	Q8NG50	284 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	OR4F6	Q8NGB9	312 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	IL17D	Q8TAD2	202 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	CD99L2	Q8TCZ2	262 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	AGR3	Q8TD06	166 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	ZNF675	Q8TD23	568 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	NSMAF	Q92636	917 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	RAB7B	Q96AH8	199 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	LENG9	Q96B70	501 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	L3HYPDH	Q96EM0	354 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	TMEM169	Q96HH4	297 aa		4.5	□□□□□ -1.69
PTCD3-212	ENST00000477520	TMEM41A	Q96HV5	264 aa		4.5	□□□□□ -1.69

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