RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 MED17Q9NVC6 651 aa5.02□□□□□ -1.61
VPS50-212ENST00000476413 BARHL2Q9NY43 387 aa5.02□□□□□ -1.61
VPS50-212ENST00000476413 FGD5Q6ZNL6 1462 aa5.01□□□□□ -1.61
VPS50-212ENST00000476413 TNFSF12O43508 249 aa5.01□□□□□ -1.61
VPS50-212ENST00000476413 NME2P1O60361 137 aa5.01□□□□□ -1.61
VPS50-212ENST00000476413 TGFAP01135 160 aa5.01□□□□□ -1.61
VPS50-212ENST00000476413 SERPINF2P08697 491 aa5.01□□□□□ -1.61
VPS50-212ENST00000476413 TPBGLP0DKB5 382 aa5.01□□□□□ -1.61
VPS50-212ENST00000476413 PRKACGP22612 351 aa5.01□□□□□ -1.61
VPS50-212ENST00000476413 MARCKSP29966 332 aaPredicted RBP5.01□□□□□ -1.61
VPS50-212ENST00000476413 AKT2P31751 481 aa5.01□□□□□ -1.61
VPS50-212ENST00000476413 CCL11P51671 97 aa5.01□□□□□ -1.61
VPS50-212ENST00000476413 RIGQ13278 110 aa5.01□□□□□ -1.61
VPS50-212ENST00000476413 C3P1Q6ZMU1 363 aa5.01□□□□□ -1.61
VPS50-212ENST00000476413 KDM8Q8N371 416 aa5.01□□□□□ -1.61
VPS50-212ENST00000476413 ART5Q96L15 291 aa5.01□□□□□ -1.61
VPS50-212ENST00000476413 RAB40CQ96S21 281 aa5.01□□□□□ -1.61
VPS50-212ENST00000476413 SPAG8Q99932 426 aaPredicted RBP5.01□□□□□ -1.61
VPS50-212ENST00000476413 SYT15Q9BQS2 421 aa5.01□□□□□ -1.61
VPS50-212ENST00000476413 FUNDC2Q9BWH2 189 aa5.01□□□□□ -1.61
VPS50-212ENST00000476413 PINK1Q9BXM7 581 aa5.01□□□□□ -1.61
VPS50-212ENST00000476413 IL1RAPQ9NPH3 570 aa5.01□□□□□ -1.61
VPS50-212ENST00000476413 ASIC3Q9UHC3 531 aa5.01□□□□□ -1.61
VPS50-212ENST00000476413 MRTO4Q9UKD2 239 aaKnown RBP5.01□□□□□ -1.61
VPS50-212ENST00000476413 DIMT1Q9UNQ2 313 aaKnown RBP5.01□□□□□ -1.61
VPS50-212ENST00000476413 NUDCQ9Y266 331 aa5.01□□□□□ -1.61
VPS50-212ENST00000476413 TMEM89A2RUT3 159 aa5□□□□□ -1.61
VPS50-212ENST00000476413 TCP10L2B9ZVM9 353 aa5□□□□□ -1.61
VPS50-212ENST00000476413 GRID2O43424 1007 aa5□□□□□ -1.61
VPS50-212ENST00000476413 KRT86O43790 486 aa5□□□□□ -1.61
VPS50-212ENST00000476413 ZG16O60844 167 aa5□□□□□ -1.61
VPS50-212ENST00000476413 IGKV3-20P01619 116 aa5□□□□□ -1.61
VPS50-212ENST00000476413 CCDC192P0DO97 292 aa5□□□□□ -1.61
VPS50-212ENST00000476413 PDHA2P29803 388 aa5□□□□□ -1.61
VPS50-212ENST00000476413 CAMLGP49069 296 aa5□□□□□ -1.61
VPS50-212ENST00000476413 LIMK2P53671 638 aa5□□□□□ -1.61
VPS50-212ENST00000476413 GEMP55040 296 aa5□□□□□ -1.61
VPS50-212ENST00000476413 KRT81Q14533 505 aa5□□□□□ -1.61
VPS50-212ENST00000476413 EXOSC7Q15024 291 aaKnown RBP5□□□□□ -1.61
VPS50-212ENST00000476413 RFTN2Q52LD8 501 aaPredicted RBP5□□□□□ -1.61
VPS50-212ENST00000476413 MPPE1Q53F39 396 aa5□□□□□ -1.61
VPS50-212ENST00000476413 TAF1BQ53T94 588 aaPredicted RBP5□□□□□ -1.61
VPS50-212ENST00000476413 WLSQ5T9L3 541 aa5□□□□□ -1.61
VPS50-212ENST00000476413 ISLR2Q6UXK2 745 aa5□□□□□ -1.61
VPS50-212ENST00000476413 TAF8Q7Z7C8 310 aa5□□□□□ -1.61
VPS50-212ENST00000476413 SLC22A16Q86VW1 577 aa5□□□□□ -1.61
VPS50-212ENST00000476413 PARP8Q8N3A8 854 aa5□□□□□ -1.61
VPS50-212ENST00000476413 OR10G7Q8NGN6 311 aa5□□□□□ -1.61
VPS50-212ENST00000476413 C16orf58Q96GQ5 468 aa5□□□□□ -1.61
VPS50-212ENST00000476413 NSMCE2Q96MF7 247 aa5□□□□□ -1.61
VPS50-212ENST00000476413 NSMCE3Q96MG7 304 aa5□□□□□ -1.61
VPS50-212ENST00000476413 KRT23Q9C075 422 aa5□□□□□ -1.61
VPS50-212ENST00000476413 NLGN3Q9NZ94 848 aa5□□□□□ -1.61
VPS50-212ENST00000476413 PLEKHA6Q9Y2H5 1048 aa5□□□□□ -1.61
VPS50-212ENST00000476413 RAD54L2Q9Y4B4 1467 aa5□□□□□ -1.61
VPS50-212ENST00000476413 UBE4BO95155 1302 aa4.99□□□□□ -1.61
VPS50-212ENST00000476413 IGHV3-38A0A0C4DH36 116 aa4.99□□□□□ -1.61
VPS50-212ENST00000476413 ARHGAP42A6NI28 874 aa4.99□□□□□ -1.61
VPS50-212ENST00000476413 EEF2KO00418 725 aaKnown RBP4.99□□□□□ -1.61
VPS50-212ENST00000476413 ADAM12O43184 909 aa4.99□□□□□ -1.61
VPS50-212ENST00000476413 CSO75390 466 aaKnown RBP4.99□□□□□ -1.61
VPS50-212ENST00000476413 MTRF1O75570 445 aaKnown RBP4.99□□□□□ -1.61
VPS50-212ENST00000476413 PTBP3O95758 552 aaKnown RBP4.99□□□□□ -1.61
VPS50-212ENST00000476413 MT-ATP6P00846 226 aa4.99□□□□□ -1.61
VPS50-212ENST00000476413 PDGFBP01127 241 aaPredicted RBP4.99□□□□□ -1.61
VPS50-212ENST00000476413 ZCCHC18P0CG32 403 aa4.99□□□□□ -1.61
VPS50-212ENST00000476413 KRT5P13647 590 aa4.99□□□□□ -1.61
VPS50-212ENST00000476413 TKTL1P51854 596 aa4.99□□□□□ -1.61
VPS50-212ENST00000476413 NLRP11P59045 1033 aaKnown RBP4.99□□□□□ -1.61
VPS50-212ENST00000476413 SMC1AQ14683 1233 aaKnown RBP4.99□□□□□ -1.61
VPS50-212ENST00000476413 ZNF528Q3MIS6 628 aa4.99□□□□□ -1.61
VPS50-212ENST00000476413 GPAT3Q53EU6 434 aa4.99□□□□□ -1.61
VPS50-212ENST00000476413 TEX35Q5T0J7 233 aa4.99□□□□□ -1.61
VPS50-212ENST00000476413 ZNF614Q8N883 585 aa4.99□□□□□ -1.61
VPS50-212ENST00000476413 NUP37Q8NFH4 326 aa4.99□□□□□ -1.61
VPS50-212ENST00000476413 RPGRIP1Q96KN7 1286 aa4.99□□□□□ -1.61
VPS50-212ENST00000476413 COQ7Q99807 217 aa4.99□□□□□ -1.61
VPS50-212ENST00000476413 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.99□□□□□ -1.61
VPS50-212ENST00000476413 COPS7AQ9UBW8 275 aa4.99□□□□□ -1.61
VPS50-212ENST00000476413 CLCA3PQ9Y6N3 262 aa4.99□□□□□ -1.61
VPS50-212ENST00000476413 PTPRUQ92729 1446 aa4.98□□□□□ -1.61
VPS50-212ENST00000476413 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.98□□□□□ -1.61
VPS50-212ENST00000476413 OR5H15A6NDH6 313 aa4.98□□□□□ -1.61
VPS50-212ENST00000476413 SOCS5O75159 536 aa4.98□□□□□ -1.61
VPS50-212ENST00000476413 OR6B1O95007 311 aa4.98□□□□□ -1.61
VPS50-212ENST00000476413 LYNP07948 512 aa4.98□□□□□ -1.61
VPS50-212ENST00000476413 NDST2P52849 883 aa4.98□□□□□ -1.61
VPS50-212ENST00000476413 ABCE1P61221 599 aaKnown RBP4.98□□□□□ -1.61
VPS50-212ENST00000476413 RPL27P61353 136 aaKnown RBP4.98□□□□□ -1.61
VPS50-212ENST00000476413 ZNF177Q13360 481 aaPredicted RBP4.98□□□□□ -1.61
VPS50-212ENST00000476413 MLF2Q15773 248 aaPredicted RBP4.98□□□□□ -1.61
VPS50-212ENST00000476413 CCDC40Q4G0X9 1142 aa4.98□□□□□ -1.61
VPS50-212ENST00000476413 DCAF12Q5T6F0 453 aa4.98□□□□□ -1.61
VPS50-212ENST00000476413 LIPJQ5W064 366 aa4.98□□□□□ -1.61
VPS50-212ENST00000476413 BSPRYQ5W0U4 402 aa4.98□□□□□ -1.61
VPS50-212ENST00000476413 ZNF730Q6ZMV8 503 aa4.98□□□□□ -1.61
VPS50-212ENST00000476413 BNIPLQ7Z465 357 aa4.98□□□□□ -1.61
VPS50-212ENST00000476413 MRPL24Q96A35 216 aaKnown RBP4.98□□□□□ -1.61
VPS50-212ENST00000476413 ATXN7L3BQ96GX2 97 aa4.98□□□□□ -1.61
VPS50-212ENST00000476413 BARHL1Q9BZE3 327 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms