RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 UNC50Q53HI1 259 aa19.73■□□□□ 0.75
LIME1-204ENST00000476183 FRG2Q64ET8 278 aa19.73■□□□□ 0.75
LIME1-204ENST00000476183 MRM1Q6IN84 353 aaKnown RBP19.73■□□□□ 0.75
LIME1-204ENST00000476183 LETMD1Q6P1Q0 360 aa19.73■□□□□ 0.75
LIME1-204ENST00000476183 GPR180Q86V85 440 aa19.73■□□□□ 0.75
LIME1-204ENST00000476183 LCA5Q86VQ0 697 aa19.73■□□□□ 0.75
LIME1-204ENST00000476183 OR4N5Q8IXE1 308 aa19.73■□□□□ 0.75
LIME1-204ENST00000476183 THAP3Q8WTV1 239 aaPredicted RBP19.73■□□□□ 0.75
LIME1-204ENST00000476183 VMP1Q96GC9 406 aa19.73■□□□□ 0.75
LIME1-204ENST00000476183 FRG2BQ96QU4 278 aa19.73■□□□□ 0.75
LIME1-204ENST00000476183 CCDC77Q9BR77 488 aa19.73■□□□□ 0.75
LIME1-204ENST00000476183 DDX31Q9H8H2 851 aaKnown RBP19.73■□□□□ 0.75
LIME1-204ENST00000476183 ASB4Q9Y574 426 aa19.73■□□□□ 0.75
LIME1-204ENST00000476183 BLACEA4D250 179 aa19.72■□□□□ 0.75
LIME1-204ENST00000476183 AGFG2O95081 481 aa19.72■□□□□ 0.75
LIME1-204ENST00000476183 RASAL1O95294 804 aa19.72■□□□□ 0.75
LIME1-204ENST00000476183 HSD17B3P37058 310 aa19.72■□□□□ 0.75
LIME1-204ENST00000476183 SLCO1A2P46721 670 aa19.72■□□□□ 0.75
LIME1-204ENST00000476183 TDGF1P3P51864 188 aa19.72■□□□□ 0.75
LIME1-204ENST00000476183 HERVK_113P63132 956 aa19.72■□□□□ 0.75
LIME1-204ENST00000476183 TNFRSF17Q02223 184 aa19.72■□□□□ 0.75
LIME1-204ENST00000476183 OC90Q02509 493 aaPredicted RBP19.72■□□□□ 0.75
LIME1-204ENST00000476183 ZNF678Q5SXM1 525 aa19.72■□□□□ 0.75
LIME1-204ENST00000476183 SH2D5Q6ZV89 423 aa19.72■□□□□ 0.75
LIME1-204ENST00000476183 ZNF227Q86WZ6 799 aa19.72■□□□□ 0.75
LIME1-204ENST00000476183 TMEM132CQ8N3T6 1108 aa19.72■□□□□ 0.75
LIME1-204ENST00000476183 ZNF321PQ8N8H1 164 aa19.72■□□□□ 0.75
LIME1-204ENST00000476183 TRPC4APQ8TEL6 797 aa19.72■□□□□ 0.75
LIME1-204ENST00000476183 NR4A3Q92570 626 aa19.72■□□□□ 0.75
LIME1-204ENST00000476183 SCMH1Q96GD3 660 aa19.72■□□□□ 0.75
LIME1-204ENST00000476183 TMEM237Q96Q45 408 aa19.72■□□□□ 0.75
LIME1-204ENST00000476183 ERVK-6Q9BXR3 956 aa19.72■□□□□ 0.75
LIME1-204ENST00000476183 RPF2Q9H7B2 306 aaKnown RBP19.72■□□□□ 0.75
LIME1-204ENST00000476183 KLHL1Q9NR64 748 aa19.72■□□□□ 0.75
LIME1-204ENST00000476183 FARSBQ9NSD9 589 aaKnown RBP19.72■□□□□ 0.75
LIME1-204ENST00000476183 EMCNQ9ULC0 261 aa19.72■□□□□ 0.75
LIME1-204ENST00000476183 PCDHGB6Q9Y5F9 930 aa19.72■□□□□ 0.75
LIME1-204ENST00000476183 DOPEY1Q5JWR5 2465 aa19.71■□□□□ 0.75
LIME1-204ENST00000476183 TMEM200CA6NKL6 621 aa19.71■□□□□ 0.75
LIME1-204ENST00000476183 WASHC1A8K0Z3 465 aa19.71■□□□□ 0.75
LIME1-204ENST00000476183 PROM1O43490 865 aa19.71■□□□□ 0.75
LIME1-204ENST00000476183 SEMA3DO95025 777 aa19.71■□□□□ 0.75
LIME1-204ENST00000476183 DDAH2O95865 285 aa19.71■□□□□ 0.75
LIME1-204ENST00000476183 OTCP00480 354 aa19.71■□□□□ 0.75
LIME1-204ENST00000476183 GBAP04062 536 aa19.71■□□□□ 0.75
LIME1-204ENST00000476183 GSTA1P08263 222 aa19.71■□□□□ 0.75
LIME1-204ENST00000476183 TAC1P20366 129 aa19.71■□□□□ 0.75
LIME1-204ENST00000476183 MST1P26927 711 aa19.71■□□□□ 0.75
LIME1-204ENST00000476183 IGLV3-21P80748 117 aaPredicted RBP19.71■□□□□ 0.75
LIME1-204ENST00000476183 CLCQ05315 142 aa19.71■□□□□ 0.75
LIME1-204ENST00000476183 SERTAD2Q14140 314 aa19.71■□□□□ 0.75
LIME1-204ENST00000476183 ELOAQ14241 798 aaKnown RBP19.71■□□□□ 0.75
LIME1-204ENST00000476183 SGO1Q5FBB7 561 aa19.71■□□□□ 0.75
LIME1-204ENST00000476183 TTC19Q6DKK2 380 aaPredicted RBP19.71■□□□□ 0.75
LIME1-204ENST00000476183 UCN3Q969E3 161 aa19.71■□□□□ 0.75
LIME1-204ENST00000476183 SERPINI1Q99574 410 aa19.71■□□□□ 0.75
LIME1-204ENST00000476183 TRIM45Q9H8W5 580 aaPredicted RBP19.71■□□□□ 0.75
LIME1-204ENST00000476183 MS4A12Q9NXJ0 267 aa19.71■□□□□ 0.75
LIME1-204ENST00000476183 LRFN1Q9P244 771 aa19.71■□□□□ 0.75
LIME1-204ENST00000476183 PHF11Q9UIL8 331 aa19.71■□□□□ 0.75
LIME1-204ENST00000476183 CLCA3PQ9Y6N3 262 aa19.71■□□□□ 0.75
LIME1-204ENST00000476183 A0A1W2PR48 441 aa19.7■□□□□ 0.74
LIME1-204ENST00000476183 SYNDIG1LA6NDD5 238 aa19.7■□□□□ 0.74
LIME1-204ENST00000476183 C17orf105B2RV13 164 aa19.7■□□□□ 0.74
LIME1-204ENST00000476183 WISP2O76076 250 aa19.7■□□□□ 0.74
LIME1-204ENST00000476183 FAM58BPP0C7Q3 252 aa19.7■□□□□ 0.74
LIME1-204ENST00000476183 ATP5F1P24539 256 aaPredicted RBP19.7■□□□□ 0.74
LIME1-204ENST00000476183 TRHRP34981 398 aaPredicted RBP19.7■□□□□ 0.74
LIME1-204ENST00000476183 VSNL1P62760 191 aa19.7■□□□□ 0.74
LIME1-204ENST00000476183 IFT88Q13099 833 aa19.7■□□□□ 0.74
LIME1-204ENST00000476183 C16orf47Q6ZP98 133 aaPredicted RBP19.7■□□□□ 0.74
LIME1-204ENST00000476183 NUDT13Q86X67 352 aa19.7■□□□□ 0.74
LIME1-204ENST00000476183 TDRPQ86YL5 185 aa19.7■□□□□ 0.74
LIME1-204ENST00000476183 OR14A16Q8NHC5 309 aa19.7■□□□□ 0.74
LIME1-204ENST00000476183 EPS8L3Q8TE67 593 aaKnown RBP19.7■□□□□ 0.74
LIME1-204ENST00000476183 SREK1Q8WXA9 508 aaKnown RBP19.7■□□□□ 0.74
LIME1-204ENST00000476183 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.7■□□□□ 0.743e-7■□□□□ 10.3
LIME1-204ENST00000476183 DAZLQ92904 295 aaKnown RBP19.7■□□□□ 0.74
LIME1-204ENST00000476183 PSMG3-AS1Q96PY0 264 aa19.7■□□□□ 0.74
LIME1-204ENST00000476183 OR8D2Q9GZM6 311 aa19.7■□□□□ 0.74
LIME1-204ENST00000476183 LIN28AQ9H9Z2 209 aaKnown RBP19.7■□□□□ 0.74
LIME1-204ENST00000476183 LYARQ9NX58 379 aaKnown RBP19.7■□□□□ 0.74
LIME1-204ENST00000476183 ERRFI1Q9UJM3 462 aaPredicted RBP19.7■□□□□ 0.74
LIME1-204ENST00000476183 SMIM23A6NLE4 172 aa19.69■□□□□ 0.74
LIME1-204ENST00000476183 CDK2AP1O14519 115 aa19.69■□□□□ 0.74
LIME1-204ENST00000476183 SUPT7LO94864 414 aa19.69■□□□□ 0.74
LIME1-204ENST00000476183 OR4F21O95013 312 aa19.69■□□□□ 0.74
LIME1-204ENST00000476183 PDYNP01213 254 aa19.69■□□□□ 0.74
LIME1-204ENST00000476183 SP1P08047 785 aa19.69■□□□□ 0.74
LIME1-204ENST00000476183 CD46P15529 392 aa19.69■□□□□ 0.74
LIME1-204ENST00000476183 TNNI3P19429 210 aa19.69■□□□□ 0.74
LIME1-204ENST00000476183 IMPDH1P20839 514 aa19.69■□□□□ 0.74
LIME1-204ENST00000476183 CYB561P49447 251 aa19.69■□□□□ 0.74
LIME1-204ENST00000476183 HLCSP50747 726 aa19.69■□□□□ 0.74
LIME1-204ENST00000476183 PRKAA2P54646 552 aa19.69■□□□□ 0.74
LIME1-204ENST00000476183 FOLH1Q04609 750 aa19.69■□□□□ 0.74
LIME1-204ENST00000476183 TCHHL1Q5QJ38 904 aaPredicted RBP19.69■□□□□ 0.74
LIME1-204ENST00000476183 C10orf62Q5T681 223 aaPredicted RBP19.69■□□□□ 0.74
LIME1-204ENST00000476183 SLC25A25Q6KCM7 469 aa19.69■□□□□ 0.74
LIME1-204ENST00000476183 CYP20A1Q6UW02 462 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms