RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 PCIF1Q9H4Z3 704 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 ASB7Q9H672 318 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 PIDD1Q9HB75 910 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 LPAR2Q9HBW0 351 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 S100A14Q9HCY8 104 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 IMP3Q9NV31 184 aaKnown RBP5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 DLGAP2Q9P1A6 1054 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 AJAP1Q9UKB5 411 aaPredicted RBP5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 MRPS33Q9Y291 106 aaKnown RBP5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 LOC100509620A0A075B734 347 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 METTL12A8MUP2 240 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 ZNF561-AS1K7EIQ3 104 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 GFRA2O00451 464 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 GSTA4O15217 222 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 ATP2C2O75185 946 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 MED6O75586 246 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 RSL1D1O76021 490 aaKnown RBP5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 RPLP2P05387 115 aaKnown RBP5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 ALPIP09923 528 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 NR2C1P13056 603 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 PPP3CBP16298 524 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 ZNF8P17098 575 aaPredicted RBP5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 ACHEP22303 614 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 GLDCP23378 1020 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 WASP42768 502 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 PTDSS1P48651 473 aaKnown RBP5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 MANFP55145 182 aaKnown RBP5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 C21orf59P57076 290 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 CHRNB3Q05901 458 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 PDCLQ13371 301 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 RAB32Q13637 225 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 ALKBH1Q13686 389 aaKnown RBP5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 MAPK11Q15759 364 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 ALKBH6Q3KRA9 238 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 EARS2Q5JPH6 523 aaKnown RBP5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 LCE2AQ5TA79 106 aaPredicted RBP5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 KIAA0930Q6ICG6 404 aaPredicted RBP5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 TMEM108Q6UXF1 575 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 ABI3BPQ7Z7G0 1075 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 GCNT2Q8N0V5 402 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 STK40Q8N2I9 435 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 OR4D6Q8NGJ1 314 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 TBC1D15Q8TC07 691 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 DLG3Q92796 817 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 AP2M1Q96CW1 435 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 PPP1R2P1Q96PQ5 205 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 XPO6Q96QU8 1125 aaKnown RBP5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 SNX18Q96RF0 628 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 TEAD3Q99594 435 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 OMDQ99983 421 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 ALG12Q9BV10 488 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 FNDC11Q9BVV2 318 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 MAGT1Q9H0U3 335 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 SLITRK2Q9H156 845 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 MTG2Q9H4K7 406 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 UPB1Q9UBR1 384 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 UBQLN2Q9UHD9 624 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 PCDHA4Q9UN74 947 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 ST3GAL5Q9UNP4 418 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 WIF1Q9Y5W5 379 aa5.8□□□□□ -1.48
SMARCE1-208ENST00000474246 LOC102723996A0A087X1L8 192 aa5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 FABP12A6NFH5 140 aa5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 TMEM191CA6NGB0 347 aa5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 GAGE10A6NGK3 116 aa5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 MAGEB17A8MXT2 336 aa5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 KLRC4-KLRK1H3BQV0 150 aa5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 M0QZK8 103 aa5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 ARPC3O15145 178 aa5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 ADAM23O75077 832 aa5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 GATBO75879 557 aaKnown RBP5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 HAUS5O94927 633 aa5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 CXCL10P02778 98 aa5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 LCKP06239 509 aa5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 LPLP06858 475 aa5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 ELFN1P0C7U0 828 aa5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 BMP4P12644 408 aa5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 ZNF26P17031 533 aaPredicted RBP5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 PTPRAP18433 802 aa5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 UGT1A6P19224 532 aa5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 DDX6P26196 483 aaKnown RBP eCLIP5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 KLRK1P26718 216 aa5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 MPIP34949 423 aa5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 CRHR1P34998 444 aa5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 SLC6A12P48065 614 aa5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 MAPK12P53778 367 aa5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 PCBP4P57723 403 aaKnown RBP5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 PTPRCAPQ14761 206 aa5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 NR0B2Q15466 257 aa5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 TGFBIQ15582 683 aa5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 C18orf21Q32NC0 220 aaPredicted RBP5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 KHDC1LQ5JSQ8 128 aa5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 VWA1Q6PCB0 445 aa5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 KIAA1324Q6UXG2 1013 aaKnown RBP5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 RSPO2Q6UXX9 243 aaPredicted RBP5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 PAQR9Q6ZVX9 377 aa5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 KLBQ86Z14 1044 aa5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 DCP2Q8IU60 420 aaKnown RBP5.79□□□□□ -1.48
SMARCE1-208ENST00000474246 RBFAQ8N0V3 343 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms