RNA–Protein interactions for RNA: ENST00000473978.5

PCYT1A-214, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 1 (best)

Gene PCYT1A, Length 1,430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-214ENST00000473978 ZNF550Q7Z398 422 aa11.59□□□□□ -0.55
PCYT1A-214ENST00000473978 GCNT2Q8N0V5 402 aa11.59□□□□□ -0.55
PCYT1A-214ENST00000473978 PPHLN1Q8NEY8 458 aaKnown RBP11.59□□□□□ -0.55
PCYT1A-214ENST00000473978 ANKRD9Q96BM1 317 aaPredicted RBP11.59□□□□□ -0.55
PCYT1A-214ENST00000473978 INTS12Q96CB8 462 aaKnown RBP11.59□□□□□ -0.55
PCYT1A-214ENST00000473978 ZC3HAV1LQ96H79 300 aaKnown RBP11.59□□□□□ -0.55
PCYT1A-214ENST00000473978 BIRC8Q96P09 236 aa11.59□□□□□ -0.55
PCYT1A-214ENST00000473978 UGT2B28Q9BY64 529 aa11.59□□□□□ -0.55
PCYT1A-214ENST00000473978 OSBPL8Q9BZF1 889 aa11.59□□□□□ -0.55
PCYT1A-214ENST00000473978 PIGMQ9H3S5 423 aa11.59□□□□□ -0.55
PCYT1A-214ENST00000473978 CCDC177Q9NQR7 707 aaPredicted RBP11.59□□□□□ -0.55
PCYT1A-214ENST00000473978 LPAR3Q9UBY5 353 aa11.59□□□□□ -0.55
PCYT1A-214ENST00000473978 RIMKLBQ9ULI2 386 aa11.59□□□□□ -0.55
PCYT1A-214ENST00000473978 JRKLQ9Y4A0 524 aa11.59□□□□□ -0.55
PCYT1A-214ENST00000473978 MED12Q93074 2177 aa11.58□□□□□ -0.56
PCYT1A-214ENST00000473978 GRID2IPA4D2P6 1211 aa11.58□□□□□ -0.56
PCYT1A-214ENST00000473978 CD3EAPO15446 510 aaKnown RBP11.58□□□□□ -0.56
PCYT1A-214ENST00000473978 ADAM11O75078 769 aa11.58□□□□□ -0.56
PCYT1A-214ENST00000473978 ZNF189O75820 626 aaPredicted RBP11.58□□□□□ -0.56
PCYT1A-214ENST00000473978 ACSL3O95573 720 aa11.58□□□□□ -0.56
PCYT1A-214ENST00000473978 PLAUP00749 431 aa11.58□□□□□ -0.56
PCYT1A-214ENST00000473978 SERPIND1P05546 499 aa11.58□□□□□ -0.56
PCYT1A-214ENST00000473978 CHRM3P20309 590 aa11.58□□□□□ -0.56
PCYT1A-214ENST00000473978 RPS3P23396 243 aaKnown RBP eCLIP11.58□□□□□ -0.56
PCYT1A-214ENST00000473978 CCKARP32238 428 aa11.58□□□□□ -0.56
PCYT1A-214ENST00000473978 PTPN7P35236 360 aa11.58□□□□□ -0.56
PCYT1A-214ENST00000473978 DIO3P55073 304 aa11.58□□□□□ -0.56
PCYT1A-214ENST00000473978 TBPL1P62380 186 aa11.58□□□□□ -0.56
PCYT1A-214ENST00000473978 RNF4P78317 190 aa11.58□□□□□ -0.56
PCYT1A-214ENST00000473978 CKAP4Q07065 602 aaKnown RBP11.58□□□□□ -0.56
PCYT1A-214ENST00000473978 PWP1Q13610 501 aa11.58□□□□□ -0.56
PCYT1A-214ENST00000473978 C11orf63Q6NUN7 778 aa11.58□□□□□ -0.56
PCYT1A-214ENST00000473978 DNM1P46Q6ZS02 220 aa11.58□□□□□ -0.56
PCYT1A-214ENST00000473978 LRRC6Q86X45 466 aa11.58□□□□□ -0.56
PCYT1A-214ENST00000473978 SPNS2Q8IVW8 549 aa11.58□□□□□ -0.56
PCYT1A-214ENST00000473978 SYCE1Q8N0S2 351 aa11.58□□□□□ -0.56
PCYT1A-214ENST00000473978 CA13Q8N1Q1 262 aa11.58□□□□□ -0.56
PCYT1A-214ENST00000473978 ARIH2OSQ8N7S6 290 aa11.58□□□□□ -0.56
PCYT1A-214ENST00000473978 ZNF611Q8N823 705 aa11.58□□□□□ -0.56
PCYT1A-214ENST00000473978 FAM71DQ8N9W8 422 aa11.58□□□□□ -0.56
PCYT1A-214ENST00000473978 UTP15Q8TED0 518 aaKnown RBP11.58□□□□□ -0.56
PCYT1A-214ENST00000473978 SHARPINQ9H0F6 387 aa11.58□□□□□ -0.56
PCYT1A-214ENST00000473978 SLCO5A1Q9H2Y9 848 aa11.58□□□□□ -0.56
PCYT1A-214ENST00000473978 ADAP2Q9NPF8 381 aa11.58□□□□□ -0.56
PCYT1A-214ENST00000473978 HOMER3Q9NSC5 361 aa11.58□□□□□ -0.56
PCYT1A-214ENST00000473978 ARGLU1Q9NWB6 273 aaPredicted RBP11.58□□□□□ -0.56
PCYT1A-214ENST00000473978 PACSIN3Q9UKS6 424 aa11.58□□□□□ -0.56
PCYT1A-214ENST00000473978 SNX12Q9UMY4 172 aa11.58□□□□□ -0.56
PCYT1A-214ENST00000473978 LAMP3Q9UQV4 416 aa11.58□□□□□ -0.56
PCYT1A-214ENST00000473978 NBEAL2Q6ZNJ1 2754 aa11.58□□□□□ -0.56
PCYT1A-214ENST00000473978 TRAPPC6AO75865 159 aa11.57□□□□□ -0.56
PCYT1A-214ENST00000473978 LRATO95237 230 aa11.57□□□□□ -0.56
PCYT1A-214ENST00000473978 C1QAP02745 245 aa11.57□□□□□ -0.56
PCYT1A-214ENST00000473978 PGRP06401 933 aa11.57□□□□□ -0.56
PCYT1A-214ENST00000473978 CDH1P12830 882 aa11.57□□□□□ -0.56
PCYT1A-214ENST00000473978 SRD5A1P18405 259 aa11.57□□□□□ -0.56
PCYT1A-214ENST00000473978 CTNNA1P35221 906 aaKnown RBP11.57□□□□□ -0.56
PCYT1A-214ENST00000473978 GRK3P35626 688 aa11.57□□□□□ -0.56
PCYT1A-214ENST00000473978 HNF4AP41235 474 aa11.57□□□□□ -0.56
PCYT1A-214ENST00000473978 HNRNPFP52597 415 aaKnown RBP11.57□□□□□ -0.56
PCYT1A-214ENST00000473978 RPS4XP62701 263 aaKnown RBP11.57□□□□□ -0.56
PCYT1A-214ENST00000473978 RCAN2Q14206 197 aa11.57□□□□□ -0.56
PCYT1A-214ENST00000473978 PIGGQ5H8A4 983 aa11.57□□□□□ -0.56
PCYT1A-214ENST00000473978 NHSL2Q5HYW2 709 aa11.57□□□□□ -0.56
PCYT1A-214ENST00000473978 C12orf54Q6X4T0 127 aa11.57□□□□□ -0.56
PCYT1A-214ENST00000473978 ZNF704Q6ZNC4 412 aaPredicted RBP11.57□□□□□ -0.56
PCYT1A-214ENST00000473978 PEX26Q7Z412 305 aa11.57□□□□□ -0.56
PCYT1A-214ENST00000473978 LINC00523Q86TU6 105 aa11.57□□□□□ -0.56
PCYT1A-214ENST00000473978 C17orf64Q86WR6 236 aa11.57□□□□□ -0.56
PCYT1A-214ENST00000473978 MED12LQ86YW9 2145 aa11.57□□□□□ -0.56
PCYT1A-214ENST00000473978 TMEM132CQ8N3T6 1108 aa11.57□□□□□ -0.56
PCYT1A-214ENST00000473978 TMEM52Q8NDY8 209 aa11.57□□□□□ -0.56
PCYT1A-214ENST00000473978 ZPLD1Q8TCW7 415 aa11.57□□□□□ -0.56
PCYT1A-214ENST00000473978 ART5Q96L15 291 aa11.57□□□□□ -0.56
PCYT1A-214ENST00000473978 ZFP3Q96NJ6 502 aa11.57□□□□□ -0.56
PCYT1A-214ENST00000473978 CLK4Q9HAZ1 481 aaKnown RBP11.57□□□□□ -0.56
PCYT1A-214ENST00000473978 AMFRQ9UKV5 643 aa11.57□□□□□ -0.56
PCYT1A-214ENST00000473978 ZNF148Q9UQR1 794 aa11.57□□□□□ -0.56
PCYT1A-214ENST00000473978 CLCA3PQ9Y6N3 262 aa11.57□□□□□ -0.56
PCYT1A-214ENST00000473978 FREM1Q5H8C1 2179 aa11.57□□□□□ -0.56
PCYT1A-214ENST00000473978 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.56□□□□□ -0.56
PCYT1A-214ENST00000473978 A0A0G2JK05 382 aa11.56□□□□□ -0.56
PCYT1A-214ENST00000473978 OVOL3O00110 214 aa11.56□□□□□ -0.56
PCYT1A-214ENST00000473978 PSMD3O43242 534 aa11.56□□□□□ -0.56
PCYT1A-214ENST00000473978 OR1F1O43749 312 aa11.56□□□□□ -0.56
PCYT1A-214ENST00000473978 NDUFS3O75489 264 aa11.56□□□□□ -0.56
PCYT1A-214ENST00000473978 TNFSF13O75888 250 aa11.56□□□□□ -0.56
PCYT1A-214ENST00000473978 TJP3O95049 919 aa11.56□□□□□ -0.56
PCYT1A-214ENST00000473978 FTCDO95954 541 aa11.56□□□□□ -0.56
PCYT1A-214ENST00000473978 ADRA1DP25100 572 aa11.56□□□□□ -0.56
PCYT1A-214ENST00000473978 FMO4P31512 558 aa11.56□□□□□ -0.56
PCYT1A-214ENST00000473978 UGT2B10P36537 528 aa11.56□□□□□ -0.56
PCYT1A-214ENST00000473978 CD79BP40259 229 aa11.56□□□□□ -0.56
PCYT1A-214ENST00000473978 SKIV2L2P42285 1042 aaKnown RBP11.56□□□□□ -0.56
PCYT1A-214ENST00000473978 PCYT1AP49585 367 aa11.56□□□□□ -0.56
PCYT1A-214ENST00000473978 GDF10P55107 478 aa11.56□□□□□ -0.56
PCYT1A-214ENST00000473978 ASPHQ12797 758 aa11.56□□□□□ -0.56
PCYT1A-214ENST00000473978 ELAVL1Q15717 326 aaKnown RBP11.56□□□□□ -0.56
PCYT1A-214ENST00000473978 PHKG1Q16816 387 aa11.56□□□□□ -0.56
PCYT1A-214ENST00000473978 TMEM249Q2WGJ8 235 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms