RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 TMEM132CQ8N3T6 1108 aa12.89□□□□□ -0.35
USF1-205ENST00000473969 C1orf52Q8N6N3 182 aaKnown RBP12.89□□□□□ -0.35
USF1-205ENST00000473969 SIRT6Q8N6T7 355 aa12.89□□□□□ -0.35
USF1-205ENST00000473969 TMEM52Q8NDY8 209 aa12.89□□□□□ -0.35
USF1-205ENST00000473969 BRIX1Q8TDN6 353 aaKnown RBP12.89□□□□□ -0.35
USF1-205ENST00000473969 DAZLQ92904 295 aaKnown RBP12.89□□□□□ -0.35
USF1-205ENST00000473969 KCNA7Q96RP8 456 aa12.89□□□□□ -0.35
USF1-205ENST00000473969 FAIM2Q9BWQ8 316 aa12.89□□□□□ -0.35
USF1-205ENST00000473969 ADAP2Q9NPF8 381 aa12.89□□□□□ -0.35
USF1-205ENST00000473969 FIS1Q9Y3D6 152 aa12.89□□□□□ -0.35
USF1-205ENST00000473969 ATG4BQ9Y4P1 393 aa12.89□□□□□ -0.35
USF1-205ENST00000473969 CLCA3PQ9Y6N3 262 aa12.89□□□□□ -0.35
USF1-205ENST00000473969 IGSF10Q6WRI0 2623 aa12.89□□□□□ -0.35
USF1-205ENST00000473969 NBEAQ8NFP9 2946 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 SERTM1A2A2V5 107 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 DYTNA2CJ06 578 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 WDR91A4D1P6 747 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 K7EM74 188 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 SLC28A1O00337 649 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 BIRC5O15392 142 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 PROM1O43490 865 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 TMPRSS11DO60235 418 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 LDB3O75112 727 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 MYO1DO94832 1006 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 ITGAMP11215 1152 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 SERPINB3P29508 390 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 SERPINB4P48594 390 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 HTR6P50406 440 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 FOXA1P55317 472 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 SLC26A5P58743 744 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 HMGCS1Q01581 520 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 GALNT1Q10472 559 aaPredicted RBP12.88□□□□□ -0.35
USF1-205ENST00000473969 ELAVL1Q15717 326 aaKnown RBP12.88□□□□□ -0.35
USF1-205ENST00000473969 TNFAIP8L3Q5GJ75 292 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 ABHD17BQ5VST6 288 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 C18orf63Q68DL7 685 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 MRM1Q6IN84 353 aaKnown RBP12.88□□□□□ -0.35
USF1-205ENST00000473969 LINC00696Q6ZRV3 163 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 PRICKLE2Q7Z3G6 844 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 ZNF605Q86T29 641 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 SLC5A8Q8N695 610 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 ANKRD42Q8N9B4 389 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 RBM18Q96H35 190 aaKnown RBP12.88□□□□□ -0.35
USF1-205ENST00000473969 PKNOX2Q96KN3 472 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 ZNF354BQ96LW1 612 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 DGAT2Q96PD7 388 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 LMF1Q96S06 567 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 WDR77Q9BQA1 342 aaPredicted RBP12.88□□□□□ -0.35
USF1-205ENST00000473969 PELOQ9BRX2 385 aaKnown RBP12.88□□□□□ -0.35
USF1-205ENST00000473969 ZNF717Q9BY31 904 aaPredicted RBP12.88□□□□□ -0.35
USF1-205ENST00000473969 MFRPQ9BY79 579 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 ACPTQ9BZG2 426 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 TMBIM4Q9HC24 238 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 MMP25Q9NPA2 562 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 NKIRAS1Q9NYS0 192 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 PSME2Q9UL46 239 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 ASB4Q9Y574 426 aa12.88□□□□□ -0.35
USF1-205ENST00000473969 GNG14A0A1W2PPG7 69 aa12.87□□□□□ -0.35
USF1-205ENST00000473969 A0A1W2PR48 441 aa12.87□□□□□ -0.35
USF1-205ENST00000473969 RGS14O43566 566 aa12.87□□□□□ -0.35
USF1-205ENST00000473969 OR10H2O60403 315 aa12.87□□□□□ -0.35
USF1-205ENST00000473969 PDGFAP04085 211 aa12.87□□□□□ -0.35
USF1-205ENST00000473969 PIK3R1P27986 724 aa12.87□□□□□ -0.35
USF1-205ENST00000473969 TPP2P29144 1249 aaPredicted RBP12.87□□□□□ -0.35
USF1-205ENST00000473969 ETV4P43268 484 aa12.87□□□□□ -0.35
USF1-205ENST00000473969 CLCN2P51788 898 aa12.87□□□□□ -0.35
USF1-205ENST00000473969 MAGOHP61326 146 aaKnown RBP12.87□□□□□ -0.35
USF1-205ENST00000473969 TRA2BP62995 288 aaKnown RBP12.87□□□□□ -0.35
USF1-205ENST00000473969 ARG2P78540 354 aa12.87□□□□□ -0.35
USF1-205ENST00000473969 ID2Q02363 134 aa12.87□□□□□ -0.35
USF1-205ENST00000473969 TBL3Q12788 808 aaKnown RBP12.87□□□□□ -0.35
USF1-205ENST00000473969 MFAP5Q13361 173 aa12.87□□□□□ -0.35
USF1-205ENST00000473969 TERF2Q15554 542 aa12.87□□□□□ -0.35
USF1-205ENST00000473969 ARL13AQ5H913 290 aaPredicted RBP12.87□□□□□ -0.35
USF1-205ENST00000473969 C6orf163Q5TEZ5 329 aa12.87□□□□□ -0.35
USF1-205ENST00000473969 OR52E8Q6IFG1 317 aa12.87□□□□□ -0.35
USF1-205ENST00000473969 ATG14Q6ZNE5 492 aa12.87□□□□□ -0.35
USF1-205ENST00000473969 ZCCHC23Q6ZST2 131 aa12.87□□□□□ -0.35
USF1-205ENST00000473969 OR4N5Q8IXE1 308 aa12.87□□□□□ -0.35
USF1-205ENST00000473969 CLYBLQ8N0X4 340 aa12.87□□□□□ -0.35
USF1-205ENST00000473969 B3GNT7Q8NFL0 401 aa12.87□□□□□ -0.35
USF1-205ENST00000473969 CHTF18Q8WVB6 975 aa12.87□□□□□ -0.35
USF1-205ENST00000473969 DEFB126Q9BYW3 111 aa12.87□□□□□ -0.35
USF1-205ENST00000473969 SLAMF7Q9NQ25 335 aa12.87□□□□□ -0.35
USF1-205ENST00000473969 PFDN4Q9NQP4 134 aa12.87□□□□□ -0.35
USF1-205ENST00000473969 STMN3Q9NZ72 180 aa12.87□□□□□ -0.35
USF1-205ENST00000473969 VTI1BQ9UEU0 232 aa12.87□□□□□ -0.35
USF1-205ENST00000473969 MCM8Q9UJA3 840 aa12.87□□□□□ -0.35
USF1-205ENST00000473969 TRAF6Q9Y4K3 522 aa12.87□□□□□ -0.35
USF1-205ENST00000473969 PIEZO2Q9H5I5 2752 aa12.86□□□□□ -0.35
USF1-205ENST00000473969 MYOCOSA0A1B0GUC4 107 aa12.86□□□□□ -0.35
USF1-205ENST00000473969 C1orf226A1L170 272 aa12.86□□□□□ -0.35
USF1-205ENST00000473969 GLOD5A6NK44 160 aa12.86□□□□□ -0.35
USF1-205ENST00000473969 SLC28A2O43868 658 aa12.86□□□□□ -0.35
USF1-205ENST00000473969 PCDH7O60245 1069 aa12.86□□□□□ -0.35
USF1-205ENST00000473969 FGF17O60258 216 aa12.86□□□□□ -0.35
USF1-205ENST00000473969 C1QL1O75973 258 aa12.86□□□□□ -0.35
USF1-205ENST00000473969 HSPA4LO95757 839 aa12.86□□□□□ -0.35
USF1-205ENST00000473969 GPR75O95800 540 aa12.86□□□□□ -0.35
USF1-205ENST00000473969 AIFM1O95831 613 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms