RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 KIRREL3Q8IZU9 778 aa11.65□□□□□ -0.54
DDX56-209ENST00000473924 GALNT16Q8N428 558 aa11.65□□□□□ -0.54
DDX56-209ENST00000473924 RAB3IL1Q8TBN0 382 aa11.65□□□□□ -0.54
DDX56-209ENST00000473924 TANKQ92844 425 aa11.65□□□□□ -0.54
DDX56-209ENST00000473924 SLC25A23Q9BV35 468 aa11.65□□□□□ -0.54
DDX56-209ENST00000473924 ADNPQ9H2P0 1102 aa11.65□□□□□ -0.54
DDX56-209ENST00000473924 MANSC1Q9H8J5 431 aa11.65□□□□□ -0.54
DDX56-209ENST00000473924 ZNF395Q9H8N7 513 aaPredicted RBP11.65□□□□□ -0.54
DDX56-209ENST00000473924 PNO1Q9NRX1 252 aaKnown RBP11.65□□□□□ -0.54
DDX56-209ENST00000473924 MCM8Q9UJA3 840 aa11.65□□□□□ -0.54
DDX56-209ENST00000473924 RAP2CQ9Y3L5 183 aa11.65□□□□□ -0.54
DDX56-209ENST00000473924 PTGDR2Q9Y5Y4 395 aa11.65□□□□□ -0.54
DDX56-209ENST00000473924 PCSK5Q92824 1860 aa11.65□□□□□ -0.54
DDX56-209ENST00000473924 IGKV3D-11A0A0A0MRZ8 115 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 MYOCOSA0A1B0GUC4 107 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 A0A1W2PQ72 361 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 GLOD5A6NK44 160 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 A8MUA0 341 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 PIP5K1BO14986 540 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 SKAP2O75563 359 aaPredicted RBP11.64□□□□□ -0.55
DDX56-209ENST00000473924 PRKRAO75569 313 aaKnown RBP11.64□□□□□ -0.55
DDX56-209ENST00000473924 AIFM1O95831 613 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 ANXA4P09525 319 aaPredicted RBP11.64□□□□□ -0.55
DDX56-209ENST00000473924 SFTPCP11686 197 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 TIA1P31483 386 aaKnown RBP eCLIP11.64□□□□□ -0.55
DDX56-209ENST00000473924 RPL14P50914 215 aaKnown RBP11.64□□□□□ -0.55
DDX56-209ENST00000473924 TRA2BP62995 288 aaKnown RBP11.64□□□□□ -0.55
DDX56-209ENST00000473924 AP2B1P63010 937 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 PPP2R2AP63151 447 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 RAPSNQ13702 412 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 SERTAD2Q14140 314 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 LY6DQ14210 128 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 BTBD16Q32M84 506 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 UGT3A2Q3SY77 523 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 HSP90B2PQ58FF3 399 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 NDUFAF5Q5TEU4 345 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 ATG14Q6ZNE5 492 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 RNF165Q6ZSG1 346 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 OR4N5Q8IXE1 308 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 KBTBD2Q8IY47 623 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 ZNF781Q8N8C0 355 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 C7orf57Q8NEG2 295 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 FDCSPQ8NFU4 85 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 C9orf43Q8TAL5 461 aaPredicted RBP11.64□□□□□ -0.55
DDX56-209ENST00000473924 DYDC1Q8WWB3 177 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 WBP1Q96G27 269 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 ABHD17AQ96GS6 310 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 THOC3Q96J01 351 aaKnown RBP11.64□□□□□ -0.55
DDX56-209ENST00000473924 CCT7Q99832 543 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 FAIM2Q9BWQ8 316 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 EBPLQ9BY08 206 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 ALOXE3Q9BYJ1 711 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 C20orf27Q9GZN8 174 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 TUBB1Q9H4B7 451 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 LRTM1Q9HBL6 345 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 THAP1Q9NVV9 213 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 C1orf109Q9NX04 203 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 TEX10Q9NXF1 929 aaPredicted RBP11.64□□□□□ -0.55
DDX56-209ENST00000473924 GPR83Q9NYM4 423 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 TUBD1Q9UJT1 453 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.64□□□□□ -0.55
DDX56-209ENST00000473924 MGAQ8IWI9 3026 aa11.64□□□□□ -0.55
DDX56-209ENST00000473924 C1orf226A1L170 272 aa11.63□□□□□ -0.55
DDX56-209ENST00000473924 TGFBR3LH3BV60 316 aa11.63□□□□□ -0.55
DDX56-209ENST00000473924 ATXN7O15265 892 aaPredicted RBP11.63□□□□□ -0.55
DDX56-209ENST00000473924 FGF17O60258 216 aa11.63□□□□□ -0.55
DDX56-209ENST00000473924 KLHL41O60662 606 aa11.63□□□□□ -0.55
DDX56-209ENST00000473924 PRR35P0CG20 571 aa11.63□□□□□ -0.55
DDX56-209ENST00000473924 TNNI3P19429 210 aa11.63□□□□□ -0.55
DDX56-209ENST00000473924 ALDH9A1P49189 494 aa11.63□□□□□ -0.55
DDX56-209ENST00000473924 TAS2R50P59544 299 aa11.63□□□□□ -0.55
DDX56-209ENST00000473924 RAE1P78406 368 aaKnown RBP11.63□□□□□ -0.55
DDX56-209ENST00000473924 ID2Q02363 134 aa11.63□□□□□ -0.55
DDX56-209ENST00000473924 FOLH1Q04609 750 aa11.63□□□□□ -0.55
DDX56-209ENST00000473924 BIKQ13323 160 aa11.63□□□□□ -0.55
DDX56-209ENST00000473924 MYBPC3Q14896 1274 aa11.63□□□□□ -0.55
DDX56-209ENST00000473924 PDCD2Q16342 344 aaPredicted RBP11.63□□□□□ -0.55
DDX56-209ENST00000473924 EXT1Q16394 746 aa11.63□□□□□ -0.55
DDX56-209ENST00000473924 GALNTL6Q49A17 601 aa11.63□□□□□ -0.55
DDX56-209ENST00000473924 OR52E8Q6IFG1 317 aa11.63□□□□□ -0.55
DDX56-209ENST00000473924 RIPOR1Q6ZS17 1223 aa11.63□□□□□ -0.55
DDX56-209ENST00000473924 Q6ZSR9 355 aa11.63□□□□□ -0.55
DDX56-209ENST00000473924 EXD3Q8N9H8 876 aa11.63□□□□□ -0.55
DDX56-209ENST00000473924 OR2T11Q8NH01 316 aa11.63□□□□□ -0.55
DDX56-209ENST00000473924 CDC26Q8NHZ8 85 aa11.63□□□□□ -0.55
DDX56-209ENST00000473924 ANKRD9Q96BM1 317 aaPredicted RBP11.63□□□□□ -0.55
DDX56-209ENST00000473924 TM4SF18Q96CE8 201 aa11.63□□□□□ -0.55
DDX56-209ENST00000473924 METTL2AQ96IZ6 378 aaKnown RBP11.63□□□□□ -0.55
DDX56-209ENST00000473924 IMMP1LQ96LU5 166 aa11.63□□□□□ -0.55
DDX56-209ENST00000473924 DGAT2Q96PD7 388 aa11.63□□□□□ -0.55
DDX56-209ENST00000473924 SORT1Q99523 831 aa11.63□□□□□ -0.55
DDX56-209ENST00000473924 LHPPQ9H008 270 aa11.63□□□□□ -0.55
DDX56-209ENST00000473924 ADAP2Q9NPF8 381 aa11.63□□□□□ -0.55
DDX56-209ENST00000473924 INTS9Q9NV88 658 aaKnown RBP11.63□□□□□ -0.55
DDX56-209ENST00000473924 SIRT5Q9NXA8 310 aa11.63□□□□□ -0.55
DDX56-209ENST00000473924 PSME2Q9UL46 239 aa11.63□□□□□ -0.55
DDX56-209ENST00000473924 DLGAP4Q9Y2H0 992 aa11.63□□□□□ -0.55
DDX56-209ENST00000473924 CCL27Q9Y4X3 112 aa11.63□□□□□ -0.55
DDX56-209ENST00000473924 POLR3HQ9Y535 204 aaPredicted RBP11.63□□□□□ -0.55
DDX56-209ENST00000473924 PCDHGA9Q9Y5G4 932 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms