RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 BANPQ8N9N5 519 aa4.47□□□□□ -1.69
CLK1-209ENST00000472679 OR1B1Q8NGR6 318 aa4.47□□□□□ -1.69
CLK1-209ENST00000472679 PCNPQ8WW12 178 aaKnown RBP4.47□□□□□ -1.69
CLK1-209ENST00000472679 PCED1BQ96HM7 432 aa4.47□□□□□ -1.69
CLK1-209ENST00000472679 DCTN5Q9BTE1 182 aa4.47□□□□□ -1.69
CLK1-209ENST00000472679 NTMT1Q9BV86 223 aa4.47□□□□□ -1.69
CLK1-209ENST00000472679 ALDH8A1Q9H2A2 487 aaPredicted RBP4.47□□□□□ -1.69
CLK1-209ENST00000472679 CXXC4Q9H2H0 198 aa4.47□□□□□ -1.69
CLK1-209ENST00000472679 LIME1Q9H400 295 aa4.47□□□□□ -1.69
CLK1-209ENST00000472679 NMUR1Q9HB89 426 aa4.47□□□□□ -1.69
CLK1-209ENST00000472679 ARGLU1Q9NWB6 273 aaPredicted RBP4.47□□□□□ -1.69
CLK1-209ENST00000472679 CWC25Q9NXE8 425 aaPredicted RBP4.47□□□□□ -1.69
CLK1-209ENST00000472679 NOL7Q9UMY1 257 aaKnown RBP4.47□□□□□ -1.69
CLK1-209ENST00000472679 IGHV3-16A0A0C4DH30 117 aa4.46□□□□□ -1.7
CLK1-209ENST00000472679 LRRD1A4D1F6 860 aa4.46□□□□□ -1.7
CLK1-209ENST00000472679 PHF1O43189 567 aaPredicted RBP4.46□□□□□ -1.7
CLK1-209ENST00000472679 TXNL1O43396 289 aa4.46□□□□□ -1.7
CLK1-209ENST00000472679 AKAP3O75969 853 aa4.46□□□□□ -1.7
CLK1-209ENST00000472679 STBD1O95210 358 aa4.46□□□□□ -1.7
CLK1-209ENST00000472679 CPNE6O95741 557 aa4.46□□□□□ -1.7
CLK1-209ENST00000472679 SEMA4FO95754 770 aa4.46□□□□□ -1.7
CLK1-209ENST00000472679 IGHG1P01857 330 aa4.46□□□□□ -1.7
CLK1-209ENST00000472679 FHP07954 510 aa4.46□□□□□ -1.7
CLK1-209ENST00000472679 CPA3P15088 417 aa4.46□□□□□ -1.7
CLK1-209ENST00000472679 ANPEPP15144 967 aa4.46□□□□□ -1.7
CLK1-209ENST00000472679 CTNNB1P35222 781 aa4.46□□□□□ -1.7
CLK1-209ENST00000472679 ZFP36L2P47974 494 aaKnown RBP4.46□□□□□ -1.7
CLK1-209ENST00000472679 TNFSF10P50591 281 aa4.46□□□□□ -1.7
CLK1-209ENST00000472679 RIDAP52758 137 aaKnown RBP4.46□□□□□ -1.7
CLK1-209ENST00000472679 ACY1Q03154 408 aa4.46□□□□□ -1.7
CLK1-209ENST00000472679 SGCBQ16585 318 aa4.46□□□□□ -1.7
CLK1-209ENST00000472679 SMU1Q2TAY7 513 aa4.46□□□□□ -1.7
CLK1-209ENST00000472679 MUC21Q5SSG8 566 aa4.46□□□□□ -1.7
CLK1-209ENST00000472679 SPINK14Q6IE38 97 aa4.46□□□□□ -1.7
CLK1-209ENST00000472679 REG3GQ6UW15 175 aa4.46□□□□□ -1.7
CLK1-209ENST00000472679 CDC20BQ86Y33 519 aa4.46□□□□□ -1.7
CLK1-209ENST00000472679 LYG1Q8N1E2 194 aa4.46□□□□□ -1.7
CLK1-209ENST00000472679 OR4Q3Q8NH05 313 aa4.46□□□□□ -1.7
CLK1-209ENST00000472679 RNASE8Q8TDE3 154 aaKnown RBP4.46□□□□□ -1.7
CLK1-209ENST00000472679 GANCQ8TET4 914 aa4.46□□□□□ -1.7
CLK1-209ENST00000472679 TOMM40LQ969M1 308 aa4.46□□□□□ -1.7
CLK1-209ENST00000472679 NUSAP1Q9BXS6 441 aaKnown RBP4.46□□□□□ -1.7
CLK1-209ENST00000472679 LRRCC1Q9C099 1032 aa4.46□□□□□ -1.7
CLK1-209ENST00000472679 STX8Q9UNK0 236 aa4.46□□□□□ -1.7
CLK1-209ENST00000472679 AUP1Q9Y679 476 aa4.46□□□□□ -1.7
CLK1-209ENST00000472679 C5orf51A6NDU8 294 aa4.45□□□□□ -1.7
CLK1-209ENST00000472679 SLC15A5A6NIM6 579 aa4.45□□□□□ -1.7
CLK1-209ENST00000472679 OGTO15294 1046 aa4.45□□□□□ -1.7
CLK1-209ENST00000472679 OR6A2O95222 327 aa4.45□□□□□ -1.7
CLK1-209ENST00000472679 SLC1A4P43007 532 aa4.45□□□□□ -1.7
CLK1-209ENST00000472679 SMSP52788 366 aa4.45□□□□□ -1.7
CLK1-209ENST00000472679 RPL27P61353 136 aaKnown RBP4.45□□□□□ -1.7
CLK1-209ENST00000472679 GABPAQ06546 454 aa4.45□□□□□ -1.7
CLK1-209ENST00000472679 GIT2Q14161 759 aa4.45□□□□□ -1.7
CLK1-209ENST00000472679 ZNF239Q16600 458 aaKnown RBP4.45□□□□□ -1.7
CLK1-209ENST00000472679 WSCD2Q2TBF2 565 aa4.45□□□□□ -1.7
CLK1-209ENST00000472679 AARDQ4LEZ3 155 aa4.45□□□□□ -1.7
CLK1-209ENST00000472679 ZNF774Q6NX45 483 aa4.45□□□□□ -1.7
CLK1-209ENST00000472679 P2RY8Q86VZ1 359 aa4.45□□□□□ -1.7
CLK1-209ENST00000472679 CLEC1AQ8NC01 280 aa4.45□□□□□ -1.7
CLK1-209ENST00000472679 HAS2Q92819 552 aa4.45□□□□□ -1.7
CLK1-209ENST00000472679 BCL2L2Q92843 193 aaPredicted RBP4.45□□□□□ -1.7
CLK1-209ENST00000472679 GUCD1Q96NT3 240 aa4.45□□□□□ -1.7
CLK1-209ENST00000472679 AGPAT1Q99943 283 aa4.45□□□□□ -1.7
CLK1-209ENST00000472679 DDX50Q9BQ39 737 aaKnown RBP4.45□□□□□ -1.7
CLK1-209ENST00000472679 SLC5A7Q9GZV3 580 aa4.45□□□□□ -1.7
CLK1-209ENST00000472679 NAPBQ9H115 298 aa4.45□□□□□ -1.7
CLK1-209ENST00000472679 MAGEF1Q9HAY2 307 aa4.45□□□□□ -1.7
CLK1-209ENST00000472679 SPATA2Q9UM82 520 aa4.45□□□□□ -1.7
CLK1-209ENST00000472679 ERVK-19Q9WJR5 959 aa4.45□□□□□ -1.7
CLK1-209ENST00000472679 SMAD5-AS1Q9Y6J3 95 aa4.45□□□□□ -1.7
CLK1-209ENST00000472679 GON4LQ3T8J9 2241 aa4.44□□□□□ -1.7
CLK1-209ENST00000472679 FAM170AA1A519 330 aa4.44□□□□□ -1.7
CLK1-209ENST00000472679 SH3PXD2BA1X283 911 aa4.44□□□□□ -1.7
CLK1-209ENST00000472679 TMCO5BA8MYB1 307 aa4.44□□□□□ -1.7
CLK1-209ENST00000472679 NEDD8-MDP1E9PL57 170 aa4.44□□□□□ -1.7
CLK1-209ENST00000472679 PSMD3O43242 534 aa4.44□□□□□ -1.7
CLK1-209ENST00000472679 FRAT2O75474 233 aaPredicted RBP4.44□□□□□ -1.7
CLK1-209ENST00000472679 RENP00797 406 aa4.44□□□□□ -1.7
CLK1-209ENST00000472679 HCKP08631 526 aa4.44□□□□□ -1.7
CLK1-209ENST00000472679 GSTA2P09210 222 aa4.44□□□□□ -1.7
CLK1-209ENST00000472679 LIMK2P53671 638 aa4.44□□□□□ -1.7
CLK1-209ENST00000472679 SLC17A1Q14916 467 aa4.44□□□□□ -1.7
CLK1-209ENST00000472679 STXBP2Q15833 593 aa4.44□□□□□ -1.7
CLK1-209ENST00000472679 FUT11Q495W5 492 aa4.44□□□□□ -1.7
CLK1-209ENST00000472679 LEMD1Q68G75 181 aa4.44□□□□□ -1.7
CLK1-209ENST00000472679 PRSS42Q7Z5A4 293 aa4.44□□□□□ -1.7
CLK1-209ENST00000472679 RTL3Q8N8U3 475 aaKnown RBP4.44□□□□□ -1.7
CLK1-209ENST00000472679 NAT8LQ8N9F0 302 aa4.44□□□□□ -1.7
CLK1-209ENST00000472679 CSNK1G2-AS1Q8NCQ2 148 aa4.44□□□□□ -1.7
CLK1-209ENST00000472679 UBTD2Q8WUN7 234 aa4.44□□□□□ -1.7
CLK1-209ENST00000472679 MRPL24Q96A35 216 aaKnown RBP4.44□□□□□ -1.7
CLK1-209ENST00000472679 RAB40CQ96S21 281 aa4.44□□□□□ -1.7
CLK1-209ENST00000472679 WWP1Q9H0M0 922 aa4.44□□□□□ -1.7
CLK1-209ENST00000472679 TRPC4Q9UBN4 977 aa4.44□□□□□ -1.7
CLK1-209ENST00000472679 EXOC7Q9UPT5 735 aa4.44□□□□□ -1.7
CLK1-209ENST00000472679 KCNK6Q9Y257 313 aa4.44□□□□□ -1.7
CLK1-209ENST00000472679 A0A1W2PRV1 198 aa4.43□□□□□ -1.7
CLK1-209ENST00000472679 CACNB4O00305 520 aaPredicted RBP4.43□□□□□ -1.7
CLK1-209ENST00000472679 CCSO14618 274 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms