RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 ARL13AQ5H913 290 aaPredicted RBP14.32□□□□□ -0.12
SDC3-203ENST00000471567 CRB2Q5IJ48 1285 aa14.32□□□□□ -0.12
SDC3-203ENST00000471567 IGFL2Q6UWQ7 119 aa14.32□□□□□ -0.12
SDC3-203ENST00000471567 RNF165Q6ZSG1 346 aa14.32□□□□□ -0.12
SDC3-203ENST00000471567 HDXQ7Z353 690 aa14.32□□□□□ -0.12
SDC3-203ENST00000471567 TRIM46Q7Z4K8 759 aa14.32□□□□□ -0.12
SDC3-203ENST00000471567 PSMF1Q92530 271 aa14.32□□□□□ -0.12
SDC3-203ENST00000471567 TM9SF4Q92544 642 aa14.32□□□□□ -0.12
SDC3-203ENST00000471567 ZBTB9Q96C00 473 aa14.32□□□□□ -0.12
SDC3-203ENST00000471567 TLCD1Q96CP7 247 aa14.32□□□□□ -0.12
SDC3-203ENST00000471567 LMF1Q96S06 567 aa14.32□□□□□ -0.12
SDC3-203ENST00000471567 ALOXE3Q9BYJ1 711 aa14.32□□□□□ -0.12
SDC3-203ENST00000471567 TNFRSF12AQ9NP84 129 aa14.32□□□□□ -0.12
SDC3-203ENST00000471567 MMP25Q9NPA2 562 aa14.32□□□□□ -0.12
SDC3-203ENST00000471567 ADAP2Q9NPF8 381 aa14.32□□□□□ -0.12
SDC3-203ENST00000471567 SIRT5Q9NXA8 310 aa14.32□□□□□ -0.12
SDC3-203ENST00000471567 SPTA1P02549 2419 aa14.32□□□□□ -0.12
SDC3-203ENST00000471567 DOCK10Q96BY6 2186 aa14.32□□□□□ -0.12
SDC3-203ENST00000471567 A0A1W2PR48 441 aa14.31□□□□□ -0.12
SDC3-203ENST00000471567 SAGE2PA6NJ88 616 aa14.31□□□□□ -0.12
SDC3-203ENST00000471567 B8ZZF3 427 aa14.31□□□□□ -0.12
SDC3-203ENST00000471567 TGFBR3LH3BV60 316 aa14.31□□□□□ -0.12
SDC3-203ENST00000471567 GBAP04062 536 aa14.31□□□□□ -0.12
SDC3-203ENST00000471567 NR2F6P10588 404 aa14.31□□□□□ -0.12
SDC3-203ENST00000471567 CHN1P15882 459 aa14.31□□□□□ -0.12
SDC3-203ENST00000471567 SERPINB3P29508 390 aa14.31□□□□□ -0.12
SDC3-203ENST00000471567 MAPK12P53778 367 aa14.31□□□□□ -0.12
SDC3-203ENST00000471567 IGLV3-21P80748 117 aaPredicted RBP14.31□□□□□ -0.12
SDC3-203ENST00000471567 MPP2Q14168 576 aa14.31□□□□□ -0.12
SDC3-203ENST00000471567 ELAVL1Q15717 326 aaKnown RBP14.31□□□□□ -0.12
SDC3-203ENST00000471567 SPIN4Q56A73 249 aa14.31□□□□□ -0.12
SDC3-203ENST00000471567 AGBL2Q5U5Z8 902 aa14.31□□□□□ -0.12
SDC3-203ENST00000471567 FAM219BQ5XKK7 198 aa14.31□□□□□ -0.12
SDC3-203ENST00000471567 C18orf63Q68DL7 685 aa14.31□□□□□ -0.12
SDC3-203ENST00000471567 ISLR2Q6UXK2 745 aa14.31□□□□□ -0.12
SDC3-203ENST00000471567 CLNKQ7Z7G1 428 aa14.31□□□□□ -0.12
SDC3-203ENST00000471567 CLYBLQ8N0X4 340 aa14.31□□□□□ -0.12
SDC3-203ENST00000471567 C1orf52Q8N6N3 182 aaKnown RBP14.31□□□□□ -0.12
SDC3-203ENST00000471567 NFAM1Q8NET5 270 aaPredicted RBP14.31□□□□□ -0.12
SDC3-203ENST00000471567 BRIX1Q8TDN6 353 aaKnown RBP14.31□□□□□ -0.12
SDC3-203ENST00000471567 ANKRD9Q96BM1 317 aaPredicted RBP14.31□□□□□ -0.12
SDC3-203ENST00000471567 SHCBP1LQ9BZQ2 653 aa14.31□□□□□ -0.12
SDC3-203ENST00000471567 VIPAS39Q9H9C1 493 aa14.31□□□□□ -0.12
SDC3-203ENST00000471567 PNO1Q9NRX1 252 aaKnown RBP14.31□□□□□ -0.12
SDC3-203ENST00000471567 VTI1BQ9UEU0 232 aa14.31□□□□□ -0.12
SDC3-203ENST00000471567 MCM8Q9UJA3 840 aa14.31□□□□□ -0.12
SDC3-203ENST00000471567 ANAPC2Q9UJX6 822 aa14.31□□□□□ -0.12
SDC3-203ENST00000471567 PPIEQ9UNP9 301 aaKnown RBP14.31□□□□□ -0.12
SDC3-203ENST00000471567 NPIPB8E9PQR5 432 aa14.3□□□□□ -0.12
SDC3-203ENST00000471567 LDB3O75112 727 aa14.3□□□□□ -0.12
SDC3-203ENST00000471567 SNUPNO95149 360 aaKnown RBP14.3□□□□□ -0.12
SDC3-203ENST00000471567 AIFM1O95831 613 aa14.3□□□□□ -0.12
SDC3-203ENST00000471567 CHEK2O96017 543 aa14.3□□□□□ -0.12
SDC3-203ENST00000471567 SERPINE1P05121 402 aa14.3□□□□□ -0.12
SDC3-203ENST00000471567 CHRNGP07510 517 aa14.3□□□□□ -0.12
SDC3-203ENST00000471567 CELA2AP08217 269 aa14.3□□□□□ -0.12
SDC3-203ENST00000471567 ITGAMP11215 1152 aa14.3□□□□□ -0.12
SDC3-203ENST00000471567 SOX11P35716 441 aa14.3□□□□□ -0.12
SDC3-203ENST00000471567 MAGOHP61326 146 aaKnown RBP14.3□□□□□ -0.12
SDC3-203ENST00000471567 HMGCS1Q01581 520 aa14.3□□□□□ -0.12
SDC3-203ENST00000471567 ACSM2AQ08AH3 577 aa14.3□□□□□ -0.12
SDC3-203ENST00000471567 MFAP5Q13361 173 aa14.3□□□□□ -0.12
SDC3-203ENST00000471567 KANK2Q63ZY3 851 aa14.3□□□□□ -0.12
SDC3-203ENST00000471567 ACSM2BQ68CK6 577 aa14.3□□□□□ -0.12
SDC3-203ENST00000471567 CLEC6AQ6EIG7 209 aa14.3□□□□□ -0.12
SDC3-203ENST00000471567 H3F3CQ6NXT2 135 aa14.3□□□□□ -0.12
SDC3-203ENST00000471567 GALNT18Q6P9A2 607 aa14.3□□□□□ -0.12
SDC3-203ENST00000471567 SCIMPQ6UWF3 145 aa14.3□□□□□ -0.12
SDC3-203ENST00000471567 ZCCHC23Q6ZST2 131 aa14.3□□□□□ -0.12
SDC3-203ENST00000471567 TMEM132CQ8N3T6 1108 aa14.3□□□□□ -0.12
SDC3-203ENST00000471567 ZADH2Q8N4Q0 377 aa14.3□□□□□ -0.12
SDC3-203ENST00000471567 TEX19Q8NA77 164 aa14.3□□□□□ -0.12
SDC3-203ENST00000471567 PPP1R14CQ8TAE6 165 aa14.3□□□□□ -0.12
SDC3-203ENST00000471567 ELP5Q8TE02 316 aa14.3□□□□□ -0.12
SDC3-203ENST00000471567 C11orf24Q96F05 449 aaPredicted RBP14.3□□□□□ -0.12
SDC3-203ENST00000471567 METTL2AQ96IZ6 378 aaKnown RBP14.3□□□□□ -0.12
SDC3-203ENST00000471567 EPS8L2Q9H6S3 715 aa14.3□□□□□ -0.12
SDC3-203ENST00000471567 TEKT2Q9UIF3 430 aa14.3□□□□□ -0.12
SDC3-203ENST00000471567 TRAF6Q9Y4K3 522 aa14.3□□□□□ -0.12
SDC3-203ENST00000471567 TMEM120BA0PK00 339 aa14.29□□□□□ -0.12
SDC3-203ENST00000471567 A8MUA0 341 aa14.29□□□□□ -0.12
SDC3-203ENST00000471567 TMEM114B3SHH9 223 aa14.29□□□□□ -0.12
SDC3-203ENST00000471567 SLC28A1O00337 649 aa14.29□□□□□ -0.12
SDC3-203ENST00000471567 FGF17O60258 216 aa14.29□□□□□ -0.12
SDC3-203ENST00000471567 RSL1D1O76021 490 aaKnown RBP14.29□□□□□ -0.12
SDC3-203ENST00000471567 MYO1DO94832 1006 aa14.29□□□□□ -0.12
SDC3-203ENST00000471567 GPR75O95800 540 aa14.29□□□□□ -0.12
SDC3-203ENST00000471567 IFNA16P05015 189 aa14.29□□□□□ -0.12
SDC3-203ENST00000471567 PRPH2P23942 346 aa14.29□□□□□ -0.12
SDC3-203ENST00000471567 GRK2P25098 689 aa14.29□□□□□ -0.12
SDC3-203ENST00000471567 GSTM5P46439 218 aa14.29□□□□□ -0.12
SDC3-203ENST00000471567 FOLH1Q04609 750 aa14.29□□□□□ -0.12
SDC3-203ENST00000471567 IMPG1Q17R60 797 aa14.29□□□□□ -0.12
SDC3-203ENST00000471567 SPDYAQ5MJ70 313 aa14.29□□□□□ -0.12
SDC3-203ENST00000471567 NDUFAF5Q5TEU4 345 aa14.29□□□□□ -0.12
SDC3-203ENST00000471567 HHATQ5VTY9 493 aa14.29□□□□□ -0.12
SDC3-203ENST00000471567 OR52E8Q6IFG1 317 aa14.29□□□□□ -0.12
SDC3-203ENST00000471567 PTRH1Q86Y79 214 aaKnown RBP14.29□□□□□ -0.12
SDC3-203ENST00000471567 B3GNT7Q8NFL0 401 aa14.29□□□□□ -0.12
SDC3-203ENST00000471567 FAM76AQ8TAV0 307 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms