RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 E2F1Q01094 437 aa16.58■□□□□ 0.24
HSPG2-208ENST00000471322 MC1RQ01726 317 aa16.58■□□□□ 0.24
HSPG2-208ENST00000471322 RGS1Q08116 209 aa16.58■□□□□ 0.24
HSPG2-208ENST00000471322 TARDBPQ13148 414 aaKnown RBP eCLIP16.58■□□□□ 0.242e-6■■■■■ 29
HSPG2-208ENST00000471322 TMEM26Q6ZUK4 368 aa16.58■□□□□ 0.24
HSPG2-208ENST00000471322 USP53Q70EK8 1073 aa16.58■□□□□ 0.24
HSPG2-208ENST00000471322 SPRED1Q7Z699 444 aa16.58■□□□□ 0.24
HSPG2-208ENST00000471322 PDSS2Q86YH6 399 aa16.58■□□□□ 0.24
HSPG2-208ENST00000471322 TICAM1Q8IUC6 712 aa16.58■□□□□ 0.24
HSPG2-208ENST00000471322 FAM47BQ8NA70 645 aa16.58■□□□□ 0.24
HSPG2-208ENST00000471322 ICA1LQ8NDH6 482 aa16.58■□□□□ 0.24
HSPG2-208ENST00000471322 OR2L5Q8NG80 312 aa16.58■□□□□ 0.24
HSPG2-208ENST00000471322 FLVCR1-AS1Q8TAF5 88 aa16.58■□□□□ 0.24
HSPG2-208ENST00000471322 FIG4Q92562 907 aa16.58■□□□□ 0.24
HSPG2-208ENST00000471322 MS4A6EQ96DS6 147 aa16.58■□□□□ 0.24
HSPG2-208ENST00000471322 FAIM2Q9BWQ8 316 aa16.58■□□□□ 0.24
HSPG2-208ENST00000471322 UGT2B28Q9BY64 529 aa16.58■□□□□ 0.24
HSPG2-208ENST00000471322 YY1AP1Q9H869 796 aa16.58■□□□□ 0.24
HSPG2-208ENST00000471322 LHX9Q9NQ69 397 aa16.58■□□□□ 0.24
HSPG2-208ENST00000471322 USP22Q9UPT9 525 aa16.58■□□□□ 0.24
HSPG2-208ENST00000471322 LRCH1Q9Y2L9 728 aa16.58■□□□□ 0.24
HSPG2-208ENST00000471322 PTPRBP23467 1997 aa16.58■□□□□ 0.24
HSPG2-208ENST00000471322 A0A0A6YYD5 115 aa16.57■□□□□ 0.24
HSPG2-208ENST00000471322 C1orf226A1L170 272 aa16.57■□□□□ 0.24
HSPG2-208ENST00000471322 GSAPA4D1B5 854 aa16.57■□□□□ 0.24
HSPG2-208ENST00000471322 OR2A25A4D2G3 310 aa16.57■□□□□ 0.24
HSPG2-208ENST00000471322 RTCAO00442 366 aaKnown RBP16.57■□□□□ 0.24
HSPG2-208ENST00000471322 ZZEF1O43149 2961 aa16.57■□□□□ 0.24
HSPG2-208ENST00000471322 B4GAT1O43505 415 aa16.57■□□□□ 0.24
HSPG2-208ENST00000471322 BMP2P12643 396 aa16.57■□□□□ 0.24
HSPG2-208ENST00000471322 POLR2CP19387 275 aaPredicted RBP16.57■□□□□ 0.24
HSPG2-208ENST00000471322 PLA2G16P53816 162 aa16.57■□□□□ 0.24
HSPG2-208ENST00000471322 SLC9A5Q14940 896 aa16.57■□□□□ 0.24
HSPG2-208ENST00000471322 LRRC36Q1X8D7 754 aa16.57■□□□□ 0.24
HSPG2-208ENST00000471322 FAM98BQ52LJ0 330 aaKnown RBP16.57■□□□□ 0.24
HSPG2-208ENST00000471322 ZNF385BQ569K4 471 aa16.57■□□□□ 0.24
HSPG2-208ENST00000471322 CPZQ66K79 652 aa16.57■□□□□ 0.24
HSPG2-208ENST00000471322 TRIM40Q6P9F5 258 aa16.57■□□□□ 0.24
HSPG2-208ENST00000471322 ABHD17CQ6PCB6 329 aa16.57■□□□□ 0.24
HSPG2-208ENST00000471322 TMPRSS7Q7RTY8 843 aa16.57■□□□□ 0.24
HSPG2-208ENST00000471322 OR6C4Q8NGE1 309 aa16.57■□□□□ 0.24
HSPG2-208ENST00000471322 OR10G6Q8NH81 332 aa16.57■□□□□ 0.24
HSPG2-208ENST00000471322 LRTOMTQ8WZ04 291 aa16.57■□□□□ 0.24
HSPG2-208ENST00000471322 SLC38A3Q99624 504 aa16.57■□□□□ 0.24
HSPG2-208ENST00000471322 RAD21L1Q9H4I0 556 aa16.57■□□□□ 0.24
HSPG2-208ENST00000471322 CLCA2Q9UQC9 943 aa16.57■□□□□ 0.24
HSPG2-208ENST00000471322 IGF2RP11717 2491 aa16.57■□□□□ 0.24
HSPG2-208ENST00000471322 ZFHX4Q86UP3 3567 aa16.57■□□□□ 0.24
HSPG2-208ENST00000471322 A0A1W2PRB8 838 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 MT-CO3P00414 261 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 IL1RNP18510 177 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 SPIDRQ14159 915 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 TOR1AIP1Q5JTV8 583 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 KLHL35Q6PF15 583 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 FIGLAQ6QHK4 219 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 SPESP1Q6UW49 350 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 TMPRSS9Q7Z410 1059 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 OOSP2Q86WS3 158 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 TMPRSS12Q86WS5 348 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 KBTBD2Q8IY47 623 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 GALNT15Q8N3T1 639 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 ZCCHC7Q8N3Z6 543 aaKnown RBP16.56■□□□□ 0.24
HSPG2-208ENST00000471322 ANKFN1Q8N957 763 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 NT5CQ8TCD5 201 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 ZFP90Q8TF47 636 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 FAM162AQ96A26 154 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 EME1Q96AY2 570 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 BTBD9Q96Q07 612 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 C17orf62Q9BQA9 187 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 SLC6A16Q9GZN6 736 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 ROGDIQ9GZN7 287 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 LRRN3Q9H3W5 708 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 HRASLS2Q9NWW9 162 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 TAS2R9Q9NYW1 312 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 TAS2R7Q9NYW3 318 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 EHD3Q9NZN3 535 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 ACACBO00763 2458 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 URADA6NGE7 173 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 H0YJX3 145 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 ERI3O43414 337 aaKnown RBP16.56■□□□□ 0.24
HSPG2-208ENST00000471322 CREG1O75629 220 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 TIPRLO75663 272 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 CDK4P11802 303 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 HIST1H1TP22492 207 aaPredicted RBP16.56■□□□□ 0.24
HSPG2-208ENST00000471322 SOX11P35716 441 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 FASLGP48023 281 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 HSPA13P48723 471 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 CHRNB3Q05901 458 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 HYAL2Q12891 473 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.56■□□□□ 0.24
HSPG2-208ENST00000471322 ARMC6Q6NXE6 501 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 FBXO42Q6P3S6 717 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 B3GNT8Q7Z7M8 397 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 ASPGQ86U10 573 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 EID3Q8N140 333 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 OR5P2Q8WZ92 322 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 CENPNQ96H22 339 aaPredicted RBP16.56■□□□□ 0.24
HSPG2-208ENST00000471322 ZNF570Q96NI8 536 aa16.56■□□□□ 0.24
HSPG2-208ENST00000471322 TEFMQ96QE5 360 aaKnown RBP16.56■□□□□ 0.24
HSPG2-208ENST00000471322 GFM1Q96RP9 751 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms