RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 SP1P08047 785 aa12.61□□□□□ -0.39
HMGN1-211ENST00000471260 CD22P20273 847 aa12.61□□□□□ -0.39
HMGN1-211ENST00000471260 MST1P26927 711 aa12.61□□□□□ -0.39
HMGN1-211ENST00000471260 GCAP28676 217 aa12.61□□□□□ -0.39
HMGN1-211ENST00000471260 ALDH3A1P30838 453 aa12.61□□□□□ -0.39
HMGN1-211ENST00000471260 CYB561P49447 251 aa12.61□□□□□ -0.39
HMGN1-211ENST00000471260 PLA2G16P53816 162 aa12.61□□□□□ -0.39
HMGN1-211ENST00000471260 KCNK10P57789 538 aa12.61□□□□□ -0.39
HMGN1-211ENST00000471260 NCALDP61601 193 aa12.61□□□□□ -0.39
HMGN1-211ENST00000471260 ELF3P78545 371 aaPredicted RBP12.61□□□□□ -0.39
HMGN1-211ENST00000471260 DLG1Q12959 904 aa12.61□□□□□ -0.39
HMGN1-211ENST00000471260 SLC13A2Q13183 592 aa12.61□□□□□ -0.39
HMGN1-211ENST00000471260 SETDB1Q15047 1291 aa12.61□□□□□ -0.39
HMGN1-211ENST00000471260 SPRED3Q2MJR0 410 aa12.61□□□□□ -0.39
HMGN1-211ENST00000471260 FBXO48Q5FWF7 155 aa12.61□□□□□ -0.39
HMGN1-211ENST00000471260 WLSQ5T9L3 541 aa12.61□□□□□ -0.39
HMGN1-211ENST00000471260 SLC25A25Q6KCM7 469 aa12.61□□□□□ -0.39
HMGN1-211ENST00000471260 CHSY3Q70JA7 882 aa12.61□□□□□ -0.39
HMGN1-211ENST00000471260 CMC1Q7Z7K0 106 aa12.61□□□□□ -0.39
HMGN1-211ENST00000471260 LAS2Q8IYD9 372 aa12.61□□□□□ -0.39
HMGN1-211ENST00000471260 SLC34A3Q8N130 599 aa12.61□□□□□ -0.39
HMGN1-211ENST00000471260 KIF2BQ8N4N8 673 aa12.61□□□□□ -0.39
HMGN1-211ENST00000471260 APCDD1LQ8NCL9 501 aa12.61□□□□□ -0.39
HMGN1-211ENST00000471260 ANKRD27Q96NW4 1050 aa12.61□□□□□ -0.39
HMGN1-211ENST00000471260 TBCDQ9BTW9 1192 aa12.61□□□□□ -0.39
HMGN1-211ENST00000471260 LYRM4Q9HD34 91 aa12.61□□□□□ -0.39
HMGN1-211ENST00000471260 ADAP2Q9NPF8 381 aa12.61□□□□□ -0.39
HMGN1-211ENST00000471260 PRDM7Q9NQW5 492 aa12.61□□□□□ -0.39
HMGN1-211ENST00000471260 IGSF5Q9NSI5 407 aa12.61□□□□□ -0.39
HMGN1-211ENST00000471260 ANKRD10Q9NXR5 420 aa12.61□□□□□ -0.39
HMGN1-211ENST00000471260 OPTCQ9UBM4 332 aa12.61□□□□□ -0.39
HMGN1-211ENST00000471260 TSC22D4Q9Y3Q8 395 aa12.61□□□□□ -0.39
HMGN1-211ENST00000471260 A0A0G2JN53 185 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 SUPT3HB4E1H0 165 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 CYR61O00622 381 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 TYROBPO43914 113 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 SUPT3HO75486 399 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 SLC25A12O75746 678 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 UBOX5O94941 541 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 SCELO95171 688 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 C2P06681 752 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 NQO1P15559 274 aaKnown RBP12.6□□□□□ -0.39
HMGN1-211ENST00000471260 EPB42P16452 691 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 KRT15P19012 456 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 EPORP19235 508 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 TPP2P29144 1249 aaPredicted RBP12.6□□□□□ -0.39
HMGN1-211ENST00000471260 CA7P43166 264 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 HLCSP50747 726 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 ARFIP1P53367 373 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 CASP6P55212 293 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 LIM2P55344 173 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 ALDH6A1Q02252 535 aaKnown RBP12.6□□□□□ -0.39
HMGN1-211ENST00000471260 ACAP2Q15057 778 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 ELAVL1Q15717 326 aaKnown RBP12.6□□□□□ -0.39
HMGN1-211ENST00000471260 GRHL2Q6ISB3 625 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 METTL2BQ6P1Q9 378 aaKnown RBP12.6□□□□□ -0.39
HMGN1-211ENST00000471260 MED27Q6P2C8 311 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 KLC3Q6P597 504 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 ADGRD1Q6QNK2 874 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 GALNTL5Q7Z4T8 443 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 FJX1Q86VR8 437 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 TMEM132CQ8N3T6 1108 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 MGARPQ8TDB4 240 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 LRRC8CQ8TDW0 803 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 DAZLQ92904 295 aaKnown RBP12.6□□□□□ -0.39
HMGN1-211ENST00000471260 EXT2Q93063 718 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 TMEM125Q96AQ2 219 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 NXNL1Q96CM4 212 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 CMTM7Q96FZ5 175 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 VMP1Q96GC9 406 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 FRMD6Q96NE9 622 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 F2RL3Q96RI0 385 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 KLHL1Q9NR64 748 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 MKS1Q9NXB0 559 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 SUCOQ9UBS9 1254 aaKnown RBP12.6□□□□□ -0.39
HMGN1-211ENST00000471260 CLDN16Q9Y5I7 305 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 SPACA6W5XKT8 324 aa12.6□□□□□ -0.39
HMGN1-211ENST00000471260 A8MUA0 341 aa12.59□□□□□ -0.39
HMGN1-211ENST00000471260 UBXN8O00124 270 aa12.59□□□□□ -0.39
HMGN1-211ENST00000471260 NME2P1O60361 137 aa12.59□□□□□ -0.39
HMGN1-211ENST00000471260 UGDHO60701 494 aa12.59□□□□□ -0.39
HMGN1-211ENST00000471260 EDF1O60869 148 aaKnown RBP12.59□□□□□ -0.39
HMGN1-211ENST00000471260 MYO1DO94832 1006 aa12.59□□□□□ -0.39
HMGN1-211ENST00000471260 KLHL2O95198 593 aa12.59□□□□□ -0.39
HMGN1-211ENST00000471260 ATP6V1G2O95670 118 aa12.59□□□□□ -0.39
HMGN1-211ENST00000471260 MTHFD2P13995 350 aa12.59□□□□□ -0.39
HMGN1-211ENST00000471260 NME2P22392 152 aa12.59□□□□□ -0.39
HMGN1-211ENST00000471260 MSH2P43246 934 aa12.59□□□□□ -0.39
HMGN1-211ENST00000471260 RASSF2P50749 326 aa12.59□□□□□ -0.39
HMGN1-211ENST00000471260 GPR143P51810 404 aa12.59□□□□□ -0.39
HMGN1-211ENST00000471260 BIKQ13323 160 aa12.59□□□□□ -0.39
HMGN1-211ENST00000471260 SERTAD2Q14140 314 aa12.59□□□□□ -0.39
HMGN1-211ENST00000471260 MAPKAPK3Q16644 382 aa12.59□□□□□ -0.39
HMGN1-211ENST00000471260 MROH9Q5TGP6 573 aa12.59□□□□□ -0.39
HMGN1-211ENST00000471260 C1QL3Q5VWW1 255 aa12.59□□□□□ -0.39
HMGN1-211ENST00000471260 LIPJQ5W064 366 aa12.59□□□□□ -0.39
HMGN1-211ENST00000471260 HIST2H2BCQ6DN03 193 aa12.59□□□□□ -0.39
HMGN1-211ENST00000471260 CENPLQ8N0S6 344 aaPredicted RBP12.59□□□□□ -0.39
HMGN1-211ENST00000471260 FAM47BQ8NA70 645 aa12.59□□□□□ -0.39
HMGN1-211ENST00000471260 POGLUT1Q8NBL1 392 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms