RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 NTMT1Q9BV86 223 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 EHD1Q9H4M9 534 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 NOL11Q9H8H0 719 aaKnown RBP8.52□□□□□ -1.05
SF3A1-206ENST00000471037 IPPKQ9H8X2 491 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 FGFR1OP2Q9NVK5 253 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 PSD3Q9NYI0 1048 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 C19orf25Q9UFG5 118 aaPredicted RBP8.52□□□□□ -1.05
SF3A1-206ENST00000471037 TINAGQ9UJW2 476 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 DYRK1BQ9Y463 629 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 POLQO75417 2590 aa8.52□□□□□ -1.05
SF3A1-206ENST00000471037 PKDREJQ9NTG1 2253 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 AKAP9Q99996 3911 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 KCNE1BA0A087WTH5 132 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 C19orf84I3L1E1 186 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 UBFD1O14562 309 aaKnown RBP8.51□□□□□ -1.05
SF3A1-206ENST00000471037 OR7A17O14581 309 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 HAT1O14929 419 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 CLGNO14967 610 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 SEC24DO94855 1032 aaPredicted RBP8.51□□□□□ -1.05
SF3A1-206ENST00000471037 TGDSO95455 350 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 TROVE2P10155 538 aaKnown RBP eCLIP8.51□□□□□ -1.05
SF3A1-206ENST00000471037 ESRRAP11474 423 aaPredicted RBP8.51□□□□□ -1.05
SF3A1-206ENST00000471037 NPPBP16860 134 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 TSPAN8P19075 237 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 EPORP19235 508 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 CAPN3P20807 821 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 ARL1P40616 181 aaPredicted RBP8.51□□□□□ -1.05
SF3A1-206ENST00000471037 CASP2P42575 452 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 RPL14P50914 215 aaKnown RBP8.51□□□□□ -1.05
SF3A1-206ENST00000471037 SNRPNP63162 240 aaKnown RBP8.51□□□□□ -1.05
SF3A1-206ENST00000471037 TSTA3Q13630 321 aaPredicted RBP8.51□□□□□ -1.05
SF3A1-206ENST00000471037 TUBA3CQ13748 450 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 E2F2Q14209 437 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 CDSNQ15517 529 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 TESK1Q15569 626 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 TBCCQ15814 346 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 MEP1AQ16819 746 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 BTBD16Q32M84 506 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 GGTA1PQ4G0N0 100 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 SH2D4BQ5SQS7 431 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 LIPJQ5W064 366 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 TUBA3EQ6PEY2 450 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 LANCL3Q6ZV70 420 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 VN1R4Q7Z5H5 301 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 MILR1Q7Z6M3 343 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 C17orf64Q86WR6 236 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 SPPL2CQ8IUH8 684 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 SIAH3Q8IW03 269 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 WDR75Q8IWA0 830 aaKnown RBP8.51□□□□□ -1.05
SF3A1-206ENST00000471037 LRRC34Q8IZ02 419 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 BEST3Q8N1M1 668 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 ZNF781Q8N8C0 355 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 OR52B6Q8NGF0 335 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 OR9A4Q8NGU2 314 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 PIWIL2Q8TC59 973 aaKnown RBP8.51□□□□□ -1.05
SF3A1-206ENST00000471037 PHF10Q8WUB8 498 aaKnown RBP8.51□□□□□ -1.05
SF3A1-206ENST00000471037 SLC5A11Q8WWX8 675 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 NEIL2Q969S2 332 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 WDR34Q96EX3 536 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 FRMD6Q96NE9 622 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 SIGLEC12Q96PQ1 595 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 SPOCK3Q9BQ16 436 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 SIKE1Q9BRV8 207 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 C20orf27Q9GZN8 174 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 ZNF395Q9H8N7 513 aaPredicted RBP8.51□□□□□ -1.05
SF3A1-206ENST00000471037 ACTR8Q9H981 624 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 MID1IP1Q9NPA3 183 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 TRPS1Q9UHF7 1281 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 MEMO1Q9Y316 297 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 CELSR1Q9NYQ6 3014 aa8.51□□□□□ -1.05
SF3A1-206ENST00000471037 IGHV3-20A0A0C4DH32 117 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 A8MUI8 341 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 PPP6CO00743 305 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 CDK2AP1O14519 115 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 AZIN1O14977 448 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 CRCPO75575 148 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 CLDN9O95484 217 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 DRD4P21917 467 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 HRH2P25021 359 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 CD96P40200 585 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 BCL6P41182 706 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 HNF4AP41235 474 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 KIR3DL1P43629 444 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 XCR1P46094 333 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 SEC24CP53992 1094 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 CBX1P83916 185 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 ALDH6A1Q02252 535 aaKnown RBP8.5□□□□□ -1.05
SF3A1-206ENST00000471037 IRF8Q02556 426 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 CHIT1Q13231 466 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 LAPTM5Q13571 262 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 OR1C1Q15619 314 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 EXT1Q16394 746 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 MINDY4Q4G0A6 757 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 XKR6Q5GH73 641 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 PAGE2BQ5JRK9 111 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 C10orf62Q5T681 223 aaPredicted RBP8.5□□□□□ -1.05
SF3A1-206ENST00000471037 GRHL2Q6ISB3 625 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 TMEM214Q6NUQ4 689 aaKnown RBP8.5□□□□□ -1.05
SF3A1-206ENST00000471037 LETMD1Q6P1Q0 360 aa8.5□□□□□ -1.05
SF3A1-206ENST00000471037 NXPE4Q6UWF7 544 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms