RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 RUNX2Q13950 521 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 DSG2Q14126 1118 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 TLR1Q15399 786 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.22□□□□□ -0.93
CCM2-204ENST00000470837 DCAF12Q5T6F0 453 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 C18orf63Q68DL7 685 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 RHBDD2Q6NTF9 364 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 BHLHB9Q6PI77 547 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 DHRS13Q6UX07 377 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 ANGPTL8Q6UXH0 198 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 DNAJC14Q6Y2X3 702 aaPredicted RBP9.22□□□□□ -0.93
CCM2-204ENST00000470837 RAB11FIP2Q7L804 512 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 PRSS41Q7RTY9 318 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 ANKRD46Q86W74 232 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 PDSS2Q86YH6 399 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 ZNF595Q8IYB9 648 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 CA13Q8N1Q1 262 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 KIF2BQ8N4N8 673 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 METTL27Q8N6F8 245 aaPredicted RBP9.22□□□□□ -0.93
CCM2-204ENST00000470837 OR5T3Q8NGG3 340 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 OR51Q1Q8NH59 317 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 OR5P2Q8WZ92 322 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 GTF2H4Q92759 462 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 TBC1D20Q96BZ9 403 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 SLC7A6OSQ96CW6 309 aaPredicted RBP9.22□□□□□ -0.93
CCM2-204ENST00000470837 PEX11GQ96HA9 241 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 CCDC115Q96NT0 180 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 CGREF1Q99674 301 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 ZPBPQ9BS86 351 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 THTPAQ9BU02 230 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 THUMPD3Q9BV44 507 aaKnown RBP9.22□□□□□ -0.93
CCM2-204ENST00000470837 ASPSCR1Q9BZE9 553 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 FBXO8Q9NRD0 319 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 ENAMQ9NRM1 1142 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 SEMA3GQ9NS98 782 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 ACSS1Q9NUB1 689 aaPredicted RBP9.22□□□□□ -0.93
CCM2-204ENST00000470837 OCIAD1Q9NX40 245 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 TAS2R7Q9NYW3 318 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 KCMF1Q9P0J7 381 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 DHCR7Q9UBM7 475 aaKnown RBP9.22□□□□□ -0.93
CCM2-204ENST00000470837 TRPC4Q9UBN4 977 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 ZNF282Q9UDV7 671 aaPredicted RBP9.22□□□□□ -0.93
CCM2-204ENST00000470837 CORO2BQ9UQ03 480 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 LOXL2Q9Y4K0 774 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 MAP4K5Q9Y4K4 846 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 PCDHB3Q9Y5E6 796 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 SNX8Q9Y5X2 465 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 MAU2Q9Y6X3 613 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.22□□□□□ -0.93
CCM2-204ENST00000470837 PCM1Q15154 2024 aa9.22□□□□□ -0.93
CCM2-204ENST00000470837 CUL9Q8IWT3 2517 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 SYNDIG1LA6NDD5 238 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 PGRMC2O15173 223 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 GSC2O15499 205 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 FOXS1O43638 330 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 DYRK3O43781 588 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 OR10H2O60403 315 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 B4GALT2O60909 372 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 GMNNO75496 209 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 C6orf47O95873 294 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 FGF5P12034 268 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 XCR1P46094 333 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 OR1D4P47884 311 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 ZFP36L2P47974 494 aaKnown RBP9.21□□□□□ -0.94
CCM2-204ENST00000470837 XKP51811 444 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 MAPK10P53779 464 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 SIM1P81133 766 aaPredicted RBP9.21□□□□□ -0.94
CCM2-204ENST00000470837 DCDP81605 110 aaKnown RBP9.21□□□□□ -0.94
CCM2-204ENST00000470837 NHLH1Q02575 133 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 OCA2Q04671 838 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 BIKQ13323 160 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 MAP7Q14244 749 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 CAPRIN1Q14444 709 aaKnown RBP9.21□□□□□ -0.94
CCM2-204ENST00000470837 C16orf72Q14CZ0 275 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 ISXQ2M1V0 245 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 SPRED3Q2MJR0 410 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 PAGE3Q5JUK9 113 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 SAMD4BQ5PRF9 694 aaKnown RBP9.21□□□□□ -0.94
CCM2-204ENST00000470837 HES3Q5TGS1 186 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 C1orf189Q5VU69 101 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 PWWP2BQ6NUJ5 590 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 ASRGL1Q7L266 308 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 ASCL5Q7RTU5 278 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 SZRD1Q7Z422 152 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 RETREG3Q86VR2 466 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 SCUBE1Q8IWY4 988 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 MMP21Q8N119 569 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 LRRC25Q8N386 305 aaPredicted RBP9.21□□□□□ -0.94
CCM2-204ENST00000470837 ARHGEF39Q8N4T4 335 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 OR8J3Q8NGG0 315 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 DNAJB14Q8TBM8 379 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 CIDECQ96AQ7 238 aaPredicted RBP9.21□□□□□ -0.94
CCM2-204ENST00000470837 LIN37Q96GY3 246 aaPredicted RBP9.21□□□□□ -0.94
CCM2-204ENST00000470837 OR1F2PQ96R84 312 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 CDRT15Q96T59 188 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 CTRCQ99895 268 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 ECSITQ9BQ95 431 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 RAD21L1Q9H4I0 556 aa9.21□□□□□ -0.94
CCM2-204ENST00000470837 MKKSQ9NPJ1 570 aaPredicted RBP9.21□□□□□ -0.94
CCM2-204ENST00000470837 SLC52A3Q9NQ40 469 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms