RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 CASKO14936 926 aa17.46■□□□□ 0.39
NCKIPSD-209ENST00000470006 ERI3O43414 337 aaKnown RBP17.46■□□□□ 0.39
NCKIPSD-209ENST00000470006 ZNF10P21506 573 aaPredicted RBP17.46■□□□□ 0.39
NCKIPSD-209ENST00000470006 TIMP3P35625 211 aa17.46■□□□□ 0.39
NCKIPSD-209ENST00000470006 VPS41P49754 854 aa17.46■□□□□ 0.39
NCKIPSD-209ENST00000470006 AP1S2P56377 157 aa17.46■□□□□ 0.39
NCKIPSD-209ENST00000470006 SORDQ00796 357 aa17.46■□□□□ 0.39
NCKIPSD-209ENST00000470006 ASPHQ12797 758 aa17.46■□□□□ 0.39
NCKIPSD-209ENST00000470006 TRIP13Q15645 432 aaPredicted RBP17.46■□□□□ 0.39
NCKIPSD-209ENST00000470006 NXPE4Q6UWF7 544 aa17.46■□□□□ 0.39
NCKIPSD-209ENST00000470006 PTPMT1Q8WUK0 201 aaPredicted RBP17.46■□□□□ 0.39
NCKIPSD-209ENST00000470006 GAL3ST3Q96A11 431 aa17.46■□□□□ 0.39
NCKIPSD-209ENST00000470006 CAMK2AQ9UQM7 478 aa17.46■□□□□ 0.39
NCKIPSD-209ENST00000470006 EIF3LQ9Y262 564 aaKnown RBP17.46■□□□□ 0.39
NCKIPSD-209ENST00000470006 CLDN16Q9Y5I7 305 aa17.46■□□□□ 0.39
NCKIPSD-209ENST00000470006 ZANQ9Y493 2812 aa17.46■□□□□ 0.39
NCKIPSD-209ENST00000470006 KIAA1549Q9HCM3 1950 aa17.46■□□□□ 0.39
NCKIPSD-209ENST00000470006 SDR42E2A6NKP2 422 aa17.45■□□□□ 0.38
NCKIPSD-209ENST00000470006 TRAPPC6AO75865 159 aa17.45■□□□□ 0.38
NCKIPSD-209ENST00000470006 GDF1P27539 372 aa17.45■□□□□ 0.38
NCKIPSD-209ENST00000470006 KCNJ1P48048 391 aa17.45■□□□□ 0.38
NCKIPSD-209ENST00000470006 PLA2G16P53816 162 aa17.45■□□□□ 0.38
NCKIPSD-209ENST00000470006 SF3B4Q15427 424 aaKnown RBP eCLIP17.45■□□□□ 0.381e-6■■■■■ 40.5
NCKIPSD-209ENST00000470006 POMZP3Q6PJE2 187 aa17.45■□□□□ 0.38
NCKIPSD-209ENST00000470006 LMNTD2Q8IXW0 634 aa17.45■□□□□ 0.38
NCKIPSD-209ENST00000470006 KLHDC8AQ8IYD2 350 aa17.45■□□□□ 0.38
NCKIPSD-209ENST00000470006 TXLNBQ8N3L3 684 aa17.45■□□□□ 0.38
NCKIPSD-209ENST00000470006 FAM13CQ8NE31 585 aa17.45■□□□□ 0.38
NCKIPSD-209ENST00000470006 OR8K3Q8NH51 312 aa17.45■□□□□ 0.38
NCKIPSD-209ENST00000470006 SLC2A12Q8TD20 617 aa17.45■□□□□ 0.38
NCKIPSD-209ENST00000470006 FBXL8Q96CD0 374 aa17.45■□□□□ 0.38
NCKIPSD-209ENST00000470006 TRIB1Q96RU8 372 aa17.45■□□□□ 0.38
NCKIPSD-209ENST00000470006 AICDAQ9GZX7 198 aa17.45■□□□□ 0.38
NCKIPSD-209ENST00000470006 ACKR4Q9NPB9 350 aa17.45■□□□□ 0.38
NCKIPSD-209ENST00000470006 IARS2Q9NSE4 1012 aaKnown RBP17.45■□□□□ 0.38
NCKIPSD-209ENST00000470006 CTNSO60931 367 aa17.44■□□□□ 0.38
NCKIPSD-209ENST00000470006 H2AFYO75367 372 aaKnown RBP17.44■□□□□ 0.38
NCKIPSD-209ENST00000470006 CTSSP25774 331 aa17.44■□□□□ 0.38
NCKIPSD-209ENST00000470006 OPRM1P35372 400 aa17.44■□□□□ 0.38
NCKIPSD-209ENST00000470006 IL2P60568 153 aa17.44■□□□□ 0.38
NCKIPSD-209ENST00000470006 TBL3Q12788 808 aaKnown RBP17.44■□□□□ 0.38
NCKIPSD-209ENST00000470006 DUSP8Q13202 625 aa17.44■□□□□ 0.38
NCKIPSD-209ENST00000470006 RCN2Q14257 317 aa17.44■□□□□ 0.38
NCKIPSD-209ENST00000470006 HSP90AA5PQ58FG0 334 aa17.44■□□□□ 0.38
NCKIPSD-209ENST00000470006 ARMC3Q5W041 872 aa17.44■□□□□ 0.38
NCKIPSD-209ENST00000470006 CAPN12Q6ZSI9 719 aa17.44■□□□□ 0.38
NCKIPSD-209ENST00000470006 YTHDF3Q7Z739 585 aaKnown RBP17.44■□□□□ 0.38
NCKIPSD-209ENST00000470006 THOC6Q86W42 341 aaKnown RBP17.44■□□□□ 0.38
NCKIPSD-209ENST00000470006 SLC22A8Q8TCC7 542 aa17.44■□□□□ 0.38
NCKIPSD-209ENST00000470006 PIGTQ969N2 578 aa17.44■□□□□ 0.38
NCKIPSD-209ENST00000470006 CSF3RQ99062 836 aa17.44■□□□□ 0.38
NCKIPSD-209ENST00000470006 TSPY26PQ9H489 355 aa17.44■□□□□ 0.38
NCKIPSD-209ENST00000470006 COPS7BQ9H9Q2 264 aaPredicted RBP17.44■□□□□ 0.38
NCKIPSD-209ENST00000470006 PRM3Q9NNZ6 103 aa17.44■□□□□ 0.38
NCKIPSD-209ENST00000470006 VTI1BQ9UEU0 232 aa17.44■□□□□ 0.38
NCKIPSD-209ENST00000470006 ADAM21Q9UKJ8 722 aa17.44■□□□□ 0.38
NCKIPSD-209ENST00000470006 KCNE2Q9Y6J6 123 aa17.44■□□□□ 0.38
NCKIPSD-209ENST00000470006 CAPN6Q9Y6Q1 641 aa17.44■□□□□ 0.38
NCKIPSD-209ENST00000470006 ZCWPW2A0A1B0GU75 182 aa17.43■□□□□ 0.38
NCKIPSD-209ENST00000470006 A0A1W2PPR1 153 aa17.43■□□□□ 0.38
NCKIPSD-209ENST00000470006 TRIM64A6NGJ6 449 aa17.43■□□□□ 0.38
NCKIPSD-209ENST00000470006 TRIM64BA6NI03 449 aa17.43■□□□□ 0.38
NCKIPSD-209ENST00000470006 GOLGA8MH3BSY2 632 aa17.43■□□□□ 0.38
NCKIPSD-209ENST00000470006 LRATO95237 230 aa17.43■□□□□ 0.38
NCKIPSD-209ENST00000470006 CPA2P48052 419 aa17.43■□□□□ 0.38
NCKIPSD-209ENST00000470006 PDAP1Q13442 181 aaKnown RBP17.43■□□□□ 0.38
NCKIPSD-209ENST00000470006 EFTUD2Q15029 972 aaKnown RBP eCLIP17.43■□□□□ 0.383e-7■■■■□ 25.8
NCKIPSD-209ENST00000470006 PIGGQ5H8A4 983 aa17.43■□□□□ 0.38
NCKIPSD-209ENST00000470006 CAND1Q86VP6 1230 aaKnown RBP17.43■□□□□ 0.38
NCKIPSD-209ENST00000470006 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.43■□□□□ 0.38
NCKIPSD-209ENST00000470006 PM20D2Q8IYS1 436 aa17.43■□□□□ 0.38
NCKIPSD-209ENST00000470006 LRRC75A-AS1Q8N1F1 130 aa17.43■□□□□ 0.38
NCKIPSD-209ENST00000470006 LRRC25Q8N386 305 aaPredicted RBP17.43■□□□□ 0.38
NCKIPSD-209ENST00000470006 RASGEF1CQ8N431 466 aa17.43■□□□□ 0.38
NCKIPSD-209ENST00000470006 GABPB2Q8TAK5 448 aaPredicted RBP17.43■□□□□ 0.38
NCKIPSD-209ENST00000470006 MS4A6EQ96DS6 147 aa17.43■□□□□ 0.38
NCKIPSD-209ENST00000470006 DACH2Q96NX9 599 aa17.43■□□□□ 0.38
NCKIPSD-209ENST00000470006 TIMP4Q99727 224 aa17.43■□□□□ 0.38
NCKIPSD-209ENST00000470006 FAM167BQ9BTA0 163 aa17.43■□□□□ 0.38
NCKIPSD-209ENST00000470006 RBM24Q9BX46 236 aaKnown RBP17.43■□□□□ 0.38
NCKIPSD-209ENST00000470006 QPCTLQ9NXS2 382 aa17.43■□□□□ 0.38
NCKIPSD-209ENST00000470006 TRPS1Q9UHF7 1281 aa17.43■□□□□ 0.38
NCKIPSD-209ENST00000470006 SLC22A14Q9Y267 594 aa17.43■□□□□ 0.38
NCKIPSD-209ENST00000470006 SH3D21A4FU49 640 aa17.42■□□□□ 0.38
NCKIPSD-209ENST00000470006 LDB3O75112 727 aa17.42■□□□□ 0.38
NCKIPSD-209ENST00000470006 ERN1O75460 977 aaKnown RBP17.42■□□□□ 0.38
NCKIPSD-209ENST00000470006 BMP7P18075 431 aa17.42■□□□□ 0.38
NCKIPSD-209ENST00000470006 CERS1P27544 350 aa17.42■□□□□ 0.38
NCKIPSD-209ENST00000470006 HNRNPH1P31943 449 aaKnown RBP17.42■□□□□ 0.38
NCKIPSD-209ENST00000470006 CDKN2DP55273 166 aa17.42■□□□□ 0.38
NCKIPSD-209ENST00000470006 LIM2P55344 173 aa17.42■□□□□ 0.38
NCKIPSD-209ENST00000470006 TIAL1Q01085 375 aaKnown RBP eCLIP17.42■□□□□ 0.38
NCKIPSD-209ENST00000470006 ID2Q02363 134 aa17.42■□□□□ 0.38
NCKIPSD-209ENST00000470006 GPS1Q13098 491 aa17.42■□□□□ 0.38
NCKIPSD-209ENST00000470006 CBLBQ13191 982 aa17.42■□□□□ 0.38
NCKIPSD-209ENST00000470006 MPEG1Q2M385 716 aa17.42■□□□□ 0.38
NCKIPSD-209ENST00000470006 ZNF791Q3KP31 576 aaPredicted RBP17.42■□□□□ 0.38
NCKIPSD-209ENST00000470006 NSUN5P2Q63ZY6 315 aa17.42■□□□□ 0.38
NCKIPSD-209ENST00000470006 TRIM40Q6P9F5 258 aa17.42■□□□□ 0.38
NCKIPSD-209ENST00000470006 DRICH1Q6PGQ1 229 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms