RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 PAOXQ6QHF9 649 aa12.31□□□□□ -0.44
CPSF4-210ENST00000469897 MEX3BQ6ZN04 569 aaKnown RBP12.31□□□□□ -0.44
CPSF4-210ENST00000469897 LRRC70Q7Z2Q7 622 aa12.31□□□□□ -0.44
CPSF4-210ENST00000469897 CCDC25Q86WR0 208 aa12.31□□□□□ -0.44
CPSF4-210ENST00000469897 LAS2Q8IYD9 372 aa12.31□□□□□ -0.44
CPSF4-210ENST00000469897 OR7G3Q8NG95 312 aa12.31□□□□□ -0.44
CPSF4-210ENST00000469897 OR5L2Q8NGL0 311 aa12.31□□□□□ -0.44
CPSF4-210ENST00000469897 OR14A16Q8NHC5 309 aa12.31□□□□□ -0.44
CPSF4-210ENST00000469897 SLC2A12Q8TD20 617 aa12.31□□□□□ -0.44
CPSF4-210ENST00000469897 DOK4Q8TEW6 326 aa12.31□□□□□ -0.44
CPSF4-210ENST00000469897 UBE2E3Q969T4 207 aa12.31□□□□□ -0.44
CPSF4-210ENST00000469897 NXNL1Q96CM4 212 aa12.31□□□□□ -0.44
CPSF4-210ENST00000469897 SCYL1Q96KG9 808 aa12.31□□□□□ -0.44
CPSF4-210ENST00000469897 MS4A8Q9BY19 250 aa12.31□□□□□ -0.44
CPSF4-210ENST00000469897 PHACTR1Q9C0D0 580 aa12.31□□□□□ -0.44
CPSF4-210ENST00000469897 NMRAL1Q9HBL8 299 aa12.31□□□□□ -0.44
CPSF4-210ENST00000469897 PLSCR2Q9NRY7 297 aa12.31□□□□□ -0.44
CPSF4-210ENST00000469897 IGSF5Q9NSI5 407 aa12.31□□□□□ -0.44
CPSF4-210ENST00000469897 RNF6Q9Y252 685 aa12.31□□□□□ -0.44
CPSF4-210ENST00000469897 CPAMD8Q8IZJ3 1885 aa12.31□□□□□ -0.44
CPSF4-210ENST00000469897 FBN2P35556 2912 aa12.31□□□□□ -0.44
CPSF4-210ENST00000469897 NKX2-6A6NCS4 301 aa12.3□□□□□ -0.44
CPSF4-210ENST00000469897 SYNDIG1LA6NDD5 238 aa12.3□□□□□ -0.44
CPSF4-210ENST00000469897 WASHC1A8K0Z3 465 aa12.3□□□□□ -0.44
CPSF4-210ENST00000469897 SUPT3HB4E1H0 165 aa12.3□□□□□ -0.44
CPSF4-210ENST00000469897 K7EPI3 171 aa12.3□□□□□ -0.44
CPSF4-210ENST00000469897 UBXN8O00124 270 aa12.3□□□□□ -0.44
CPSF4-210ENST00000469897 FGF17O60258 216 aa12.3□□□□□ -0.44
CPSF4-210ENST00000469897 SUPT3HO75486 399 aa12.3□□□□□ -0.44
CPSF4-210ENST00000469897 CRABP2P29373 138 aa12.3□□□□□ -0.44
CPSF4-210ENST00000469897 MAGEA4P43358 317 aa12.3□□□□□ -0.44
CPSF4-210ENST00000469897 TLE4Q04727 773 aa12.3□□□□□ -0.44
CPSF4-210ENST00000469897 ASPHQ12797 758 aa12.3□□□□□ -0.44
CPSF4-210ENST00000469897 E2F2Q14209 437 aa12.3□□□□□ -0.44
CPSF4-210ENST00000469897 DEPDC1Q5TB30 811 aa12.3□□□□□ -0.44
CPSF4-210ENST00000469897 KHDRBS2Q5VWX1 349 aaKnown RBP12.3□□□□□ -0.44
CPSF4-210ENST00000469897 OR4C11Q6IEV9 310 aa12.3□□□□□ -0.44
CPSF4-210ENST00000469897 DGAT2L6Q6ZPD8 337 aa12.3□□□□□ -0.44
CPSF4-210ENST00000469897 RTL4Q6ZR62 310 aa12.3□□□□□ -0.44
CPSF4-210ENST00000469897 TBC1D1Q86TI0 1168 aaPredicted RBP12.3□□□□□ -0.44
CPSF4-210ENST00000469897 CCDC71Q8IV32 467 aaPredicted RBP12.3□□□□□ -0.44
CPSF4-210ENST00000469897 TEX9Q8N6V9 391 aa12.3□□□□□ -0.44
CPSF4-210ENST00000469897 OR5M9Q8NGP3 310 aa12.3□□□□□ -0.44
CPSF4-210ENST00000469897 OR8K3Q8NH51 312 aa12.3□□□□□ -0.44
CPSF4-210ENST00000469897 LILRB4Q8NHJ6 448 aa12.3□□□□□ -0.44
CPSF4-210ENST00000469897 FBF1Q8TES7 1133 aa12.3□□□□□ -0.44
CPSF4-210ENST00000469897 ZNF721Q8TF20 911 aa12.3□□□□□ -0.44
CPSF4-210ENST00000469897 RND1Q92730 232 aa12.3□□□□□ -0.44
CPSF4-210ENST00000469897 MRRFQ96E11 262 aaKnown RBP12.3□□□□□ -0.44
CPSF4-210ENST00000469897 CMTM7Q96FZ5 175 aa12.3□□□□□ -0.44
CPSF4-210ENST00000469897 SENP5Q96HI0 755 aaPredicted RBP12.3□□□□□ -0.44
CPSF4-210ENST00000469897 ATOH8Q96SQ7 321 aa12.3□□□□□ -0.44
CPSF4-210ENST00000469897 FAM173AQ9BQD7 235 aa12.3□□□□□ -0.44
CPSF4-210ENST00000469897 TTTY12Q9BZ98 90 aa12.3□□□□□ -0.44
CPSF4-210ENST00000469897 TP63Q9H3D4 680 aaPredicted RBP12.3□□□□□ -0.44
CPSF4-210ENST00000469897 PNPLA3Q9NST1 481 aa12.3□□□□□ -0.44
CPSF4-210ENST00000469897 OPTCQ9UBM4 332 aa12.3□□□□□ -0.44
CPSF4-210ENST00000469897 TNFRSF10DQ9UBN6 386 aa12.3□□□□□ -0.44
CPSF4-210ENST00000469897 SPACA6W5XKT8 324 aa12.3□□□□□ -0.44
CPSF4-210ENST00000469897 ACOT7O00154 380 aa12.29□□□□□ -0.44
CPSF4-210ENST00000469897 HRKO00198 91 aa12.29□□□□□ -0.44
CPSF4-210ENST00000469897 GLSO94925 669 aaPredicted RBP12.29□□□□□ -0.44
CPSF4-210ENST00000469897 LTA4HP09960 611 aaKnown RBP12.29□□□□□ -0.44
CPSF4-210ENST00000469897 EPB42P16452 691 aa12.29□□□□□ -0.44
CPSF4-210ENST00000469897 SSR2P43308 183 aa12.29□□□□□ -0.44
CPSF4-210ENST00000469897 STT3AP46977 705 aa12.29□□□□□ -0.44
CPSF4-210ENST00000469897 DNASE1L1P49184 302 aa12.29□□□□□ -0.44
CPSF4-210ENST00000469897 DDX39BQ13838 428 aaKnown RBP12.29□□□□□ -0.44
CPSF4-210ENST00000469897 SLMAPQ14BN4 828 aa12.29□□□□□ -0.44
CPSF4-210ENST00000469897 PIGGQ5H8A4 983 aa12.29□□□□□ -0.44
CPSF4-210ENST00000469897 C18orf63Q68DL7 685 aa12.29□□□□□ -0.44
CPSF4-210ENST00000469897 ZNF585AQ6P3V2 769 aa12.29□□□□□ -0.44
CPSF4-210ENST00000469897 OPN5Q6U736 354 aa12.29□□□□□ -0.44
CPSF4-210ENST00000469897 RGS9BPQ6ZS82 235 aa12.29□□□□□ -0.44
CPSF4-210ENST00000469897 FAM47EQ6ZV65 393 aa12.29□□□□□ -0.44
CPSF4-210ENST00000469897 SLC22A16Q86VW1 577 aa12.29□□□□□ -0.44
CPSF4-210ENST00000469897 MYLK4Q86YV6 388 aaPredicted RBP12.29□□□□□ -0.44
CPSF4-210ENST00000469897 TMEM251Q8N6I4 163 aa12.29□□□□□ -0.44
CPSF4-210ENST00000469897 HUS1BQ8NHY5 278 aa12.29□□□□□ -0.44
CPSF4-210ENST00000469897 FBXO25Q8TCJ0 367 aa12.29□□□□□ -0.44
CPSF4-210ENST00000469897 CHTF18Q8WVB6 975 aa12.29□□□□□ -0.44
CPSF4-210ENST00000469897 KCTD4Q8WVF5 259 aa12.29□□□□□ -0.44
CPSF4-210ENST00000469897 ASB5Q8WWX0 329 aa12.29□□□□□ -0.44
CPSF4-210ENST00000469897 RGMAQ96B86 450 aa12.29□□□□□ -0.44
CPSF4-210ENST00000469897 C14orf79Q96F83 325 aa12.29□□□□□ -0.44
CPSF4-210ENST00000469897 RBM18Q96H35 190 aaKnown RBP12.29□□□□□ -0.44
CPSF4-210ENST00000469897 DGAT2Q96PD7 388 aa12.29□□□□□ -0.44
CPSF4-210ENST00000469897 MTERF1Q99551 399 aaKnown RBP12.29□□□□□ -0.44
CPSF4-210ENST00000469897 RPF2Q9H7B2 306 aaKnown RBP12.29□□□□□ -0.44
CPSF4-210ENST00000469897 ZDHHC11Q9H8X9 412 aa12.29□□□□□ -0.44
CPSF4-210ENST00000469897 SEMA4BQ9NPR2 832 aaPredicted RBP12.29□□□□□ -0.44
CPSF4-210ENST00000469897 SACM1LQ9NTJ5 587 aa12.29□□□□□ -0.44
CPSF4-210ENST00000469897 NUDT4Q9NZJ9 180 aa12.29□□□□□ -0.44
CPSF4-210ENST00000469897 ACOT9Q9Y305 439 aa12.29□□□□□ -0.44
CPSF4-210ENST00000469897 UTP11Q9Y3A2 253 aaKnown RBP12.29□□□□□ -0.44
CPSF4-210ENST00000469897 ZGRF1Q86YA3 2104 aa12.29□□□□□ -0.44
CPSF4-210ENST00000469897 APCP25054 2843 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 SVILO95425 2214 aa12.28□□□□□ -0.44
CPSF4-210ENST00000469897 DIDO1Q9BTC0 2240 aaKnown RBP12.28□□□□□ -0.44
CPSF4-210ENST00000469897 ATP6AP2A0A1C7CYW4 349 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms