RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 RGS14O43566 566 aa16.67■□□□□ 0.26
MRPL28-208ENST00000469744 SRPX2O60687 465 aaPredicted RBP16.67■□□□□ 0.26
MRPL28-208ENST00000469744 EEDO75530 441 aaKnown RBP16.67■□□□□ 0.26
MRPL28-208ENST00000469744 C8BP07358 591 aa16.67■□□□□ 0.26
MRPL28-208ENST00000469744 HIST1H2AGP0C0S8 130 aaPredicted RBP16.67■□□□□ 0.26
MRPL28-208ENST00000469744 HIST1H2ADP20671 130 aa16.67■□□□□ 0.26
MRPL28-208ENST00000469744 IMPA1P29218 277 aa16.67■□□□□ 0.26
MRPL28-208ENST00000469744 DIO3P55073 304 aa16.67■□□□□ 0.26
MRPL28-208ENST00000469744 TAP2Q03519 686 aa16.67■□□□□ 0.26
MRPL28-208ENST00000469744 SSPNQ14714 243 aa16.67■□□□□ 0.26
MRPL28-208ENST00000469744 C18orf21Q32NC0 220 aaPredicted RBP16.67■□□□□ 0.26
MRPL28-208ENST00000469744 THEMIS2Q5TEJ8 643 aa16.67■□□□□ 0.26
MRPL28-208ENST00000469744 MED25Q71SY5 747 aa16.67■□□□□ 0.26
MRPL28-208ENST00000469744 PPP1R32Q7Z5V6 425 aa16.67■□□□□ 0.26
MRPL28-208ENST00000469744 ADCK2Q7Z695 626 aa16.67■□□□□ 0.26
MRPL28-208ENST00000469744 RETREG3Q86VR2 466 aa16.67■□□□□ 0.26
MRPL28-208ENST00000469744 PQLC1Q8N2U9 271 aa16.67■□□□□ 0.26
MRPL28-208ENST00000469744 TMEM102Q8N9M5 508 aaPredicted RBP16.67■□□□□ 0.26
MRPL28-208ENST00000469744 GOLM1Q8NBJ4 401 aa16.67■□□□□ 0.26
MRPL28-208ENST00000469744 FBXO15Q8NCQ5 510 aaPredicted RBP16.67■□□□□ 0.26
MRPL28-208ENST00000469744 CATSPER1Q8NEC5 780 aa16.67■□□□□ 0.26
MRPL28-208ENST00000469744 HIST1H2AHQ96KK5 128 aa16.67■□□□□ 0.26
MRPL28-208ENST00000469744 HIST1H2AJQ99878 128 aa16.67■□□□□ 0.26
MRPL28-208ENST00000469744 ECSITQ9BQ95 431 aa16.67■□□□□ 0.26
MRPL28-208ENST00000469744 H2AFJQ9BTM1 129 aa16.67■□□□□ 0.26
MRPL28-208ENST00000469744 NUDT9Q9BW91 350 aa16.67■□□□□ 0.26
MRPL28-208ENST00000469744 MUC13Q9H3R2 512 aa16.67■□□□□ 0.26
MRPL28-208ENST00000469744 CUEDC1Q9NWM3 386 aaPredicted RBP16.67■□□□□ 0.26
MRPL28-208ENST00000469744 LEF1Q9UJU2 399 aaPredicted RBP16.67■□□□□ 0.26
MRPL28-208ENST00000469744 CCL27Q9Y4X3 112 aa16.67■□□□□ 0.26
MRPL28-208ENST00000469744 PCDHGA9Q9Y5G4 932 aaKnown RBP16.67■□□□□ 0.26
MRPL28-208ENST00000469744 SERTM1A2A2V5 107 aa16.66■□□□□ 0.26
MRPL28-208ENST00000469744 PABPN1LA6NDY0 278 aaKnown RBP16.66■□□□□ 0.26
MRPL28-208ENST00000469744 ZNF839A8K0R7 811 aa16.66■□□□□ 0.26
MRPL28-208ENST00000469744 H0YGG7 62 aa16.66■□□□□ 0.26
MRPL28-208ENST00000469744 LSM1O15116 133 aaKnown RBP16.66■□□□□ 0.26
MRPL28-208ENST00000469744 STAMBPO95630 424 aa16.66■□□□□ 0.26
MRPL28-208ENST00000469744 HSD17B1P14061 328 aa16.66■□□□□ 0.26
MRPL28-208ENST00000469744 HSD17B2P37059 387 aa16.66■□□□□ 0.26
MRPL28-208ENST00000469744 ZFP36L2P47974 494 aaKnown RBP16.66■□□□□ 0.26
MRPL28-208ENST00000469744 SLC6A12P48065 614 aa16.66■□□□□ 0.26
MRPL28-208ENST00000469744 RRADP55042 308 aa16.66■□□□□ 0.26
MRPL28-208ENST00000469744 ARF3P61204 181 aaPredicted RBP16.66■□□□□ 0.26
MRPL28-208ENST00000469744 PRDX1Q06830 199 aaKnown RBP16.66■□□□□ 0.26
MRPL28-208ENST00000469744 OVCH1Q7RTY7 1134 aa16.66■□□□□ 0.26
MRPL28-208ENST00000469744 PAQR7Q86WK9 346 aa16.66■□□□□ 0.26
MRPL28-208ENST00000469744 PLD3Q8IV08 490 aa16.66■□□□□ 0.26
MRPL28-208ENST00000469744 KLHDC8AQ8IYD2 350 aa16.66■□□□□ 0.26
MRPL28-208ENST00000469744 LRRC56Q8IYG6 542 aaPredicted RBP16.66■□□□□ 0.26
MRPL28-208ENST00000469744 FNDC5Q8NAU1 212 aa16.66■□□□□ 0.26
MRPL28-208ENST00000469744 BHLHE22Q8NFJ8 381 aaPredicted RBP16.66■□□□□ 0.26
MRPL28-208ENST00000469744 C10orf90Q96M02 699 aa16.66■□□□□ 0.26
MRPL28-208ENST00000469744 CDK15Q96Q40 435 aa16.66■□□□□ 0.26
MRPL28-208ENST00000469744 KLHL4Q9C0H6 718 aa16.66■□□□□ 0.26
MRPL28-208ENST00000469744 SOX17Q9H6I2 414 aaPredicted RBP16.66■□□□□ 0.26
MRPL28-208ENST00000469744 ARL15Q9NXU5 204 aa16.66■□□□□ 0.26
MRPL28-208ENST00000469744 PACSIN3Q9UKS6 424 aa16.66■□□□□ 0.26
MRPL28-208ENST00000469744 COL12A1Q99715 3063 aa16.65■□□□□ 0.26
MRPL28-208ENST00000469744 C15orf38-AP3S2A0A0A6YYH1 394 aa16.65■□□□□ 0.26
MRPL28-208ENST00000469744 PRSS51A0A1B0GVH4 220 aa16.65■□□□□ 0.26
MRPL28-208ENST00000469744 PRORSD1PA6NEY8 169 aa16.65■□□□□ 0.26
MRPL28-208ENST00000469744 HAT1O14929 419 aa16.65■□□□□ 0.26
MRPL28-208ENST00000469744 ALOX12BO75342 701 aa16.65■□□□□ 0.26
MRPL28-208ENST00000469744 CEACAM4O75871 244 aa16.65■□□□□ 0.26
MRPL28-208ENST00000469744 CLDN9O95484 217 aa16.65■□□□□ 0.26
MRPL28-208ENST00000469744 STATHP02808 62 aa16.65■□□□□ 0.26
MRPL28-208ENST00000469744 HTR6P50406 440 aa16.65■□□□□ 0.26
MRPL28-208ENST00000469744 POLR2JP52435 117 aaKnown RBP16.65■□□□□ 0.26
MRPL28-208ENST00000469744 MLLT10P55197 1068 aa16.65■□□□□ 0.26
MRPL28-208ENST00000469744 ZNF33BQ06732 778 aa16.65■□□□□ 0.26
MRPL28-208ENST00000469744 BNIP2Q12982 314 aa16.65■□□□□ 0.26
MRPL28-208ENST00000469744 NKG7Q16617 165 aa16.65■□□□□ 0.26
MRPL28-208ENST00000469744 HKDC1Q2TB90 917 aa16.65■□□□□ 0.26
MRPL28-208ENST00000469744 FAM214AQ32MH5 1076 aa16.65■□□□□ 0.26
MRPL28-208ENST00000469744 VPS26BQ4G0F5 336 aa16.65■□□□□ 0.26
MRPL28-208ENST00000469744 NADK2Q4G0N4 442 aa16.65■□□□□ 0.26
MRPL28-208ENST00000469744 OGFRL1Q5TC84 451 aaPredicted RBP16.65■□□□□ 0.26
MRPL28-208ENST00000469744 YOD1Q5VVQ6 348 aaPredicted RBP16.65■□□□□ 0.26
MRPL28-208ENST00000469744 FAM219BQ5XKK7 198 aa16.65■□□□□ 0.26
MRPL28-208ENST00000469744 ZNF425Q6IV72 752 aa16.65■□□□□ 0.26
MRPL28-208ENST00000469744 ARPINQ7Z6K5 226 aa16.65■□□□□ 0.26
MRPL28-208ENST00000469744 PRSS58Q8IYP2 241 aa16.65■□□□□ 0.26
MRPL28-208ENST00000469744 HIPK4Q8NE63 616 aa16.65■□□□□ 0.26
MRPL28-208ENST00000469744 MCOLN3Q8TDD5 553 aa16.65■□□□□ 0.26
MRPL28-208ENST00000469744 FKBP10Q96AY3 582 aa16.65■□□□□ 0.26
MRPL28-208ENST00000469744 FBXL8Q96CD0 374 aa16.65■□□□□ 0.26
MRPL28-208ENST00000469744 LRRC58Q96CX6 371 aa16.65■□□□□ 0.26
MRPL28-208ENST00000469744 SPSB2Q99619 263 aa16.65■□□□□ 0.26
MRPL28-208ENST00000469744 P4HTMQ9NXG6 502 aa16.65■□□□□ 0.26
MRPL28-208ENST00000469744 SH2B3Q9UQQ2 575 aa16.65■□□□□ 0.26
MRPL28-208ENST00000469744 RELNP78509 3460 aa16.65■□□□□ 0.26
MRPL28-208ENST00000469744 HECTD1Q9ULT8 2610 aa16.65■□□□□ 0.26
MRPL28-208ENST00000469744 RP1L1Q8IWN7 2480 aaPredicted RBP16.64■□□□□ 0.25
MRPL28-208ENST00000469744 TCRBV3S1A0A5B6 114 aa16.64■□□□□ 0.25
MRPL28-208ENST00000469744 CCDC154A6NI56 674 aa16.64■□□□□ 0.25
MRPL28-208ENST00000469744 NPIPB8E9PQR5 432 aa16.64■□□□□ 0.25
MRPL28-208ENST00000469744 FXYD1O00168 92 aa16.64■□□□□ 0.25
MRPL28-208ENST00000469744 MANBAO00462 879 aa16.64■□□□□ 0.25
MRPL28-208ENST00000469744 PEX12O00623 359 aa16.64■□□□□ 0.25
MRPL28-208ENST00000469744 FFAR3O14843 346 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms