RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 GAREM1Q9H706 876 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 RIMS3Q9UJD0 308 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 SLC22A7Q9Y694 548 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 VCANP13611 3396 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 SCN3AQ9NY46 2000 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 IGHV5-51A0A0C4DH38 117 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 RNF103-CHMP3A0A140T963 221 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 ZNF860A6NHJ4 632 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 CASQ2O14958 399 aaPredicted RBP17.94■□□□□ 0.46
SMC4-209ENST00000468653 YKT6O15498 198 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 HNRNPRO43390 633 aaKnown RBP17.94■□□□□ 0.46
SMC4-209ENST00000468653 TIPRLO75663 272 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 TLX1P31314 330 aaPredicted RBP17.94■□□□□ 0.46
SMC4-209ENST00000468653 NCBP2P52298 156 aaKnown RBP eCLIP17.94■□□□□ 0.462e-17■■■■■ 76.5
SMC4-209ENST00000468653 LIM2P55344 173 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 GPLD1P80108 840 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 TNFRSF17Q02223 184 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 SPIDRQ14159 915 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 MLC1Q15049 377 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 KANSL1Q7Z3B3 1105 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 PLXDC1Q8IUK5 500 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 SAP25Q8TEE9 199 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 AMDHD1Q96NU7 426 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 SEPHS2Q99611 448 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 GLIPR2Q9H4G4 154 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 PDE7BQ9NP56 450 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 MS4A12Q9NXJ0 267 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 KCMF1Q9P0J7 381 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 CES1P1Q9UKY3 287 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 DAPP1Q9UN19 280 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 PLCL2Q9UPR0 1127 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 NAALAD2Q9Y3Q0 740 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 MAP4K5Q9Y4K4 846 aa17.94■□□□□ 0.46
SMC4-209ENST00000468653 B4GAT1O43505 415 aa17.93■□□□□ 0.46
SMC4-209ENST00000468653 ZBTB11O95625 1053 aaPredicted RBP17.93■□□□□ 0.46
SMC4-209ENST00000468653 RETP07949 1114 aa17.93■□□□□ 0.46
SMC4-209ENST00000468653 SP9P0CG40 484 aa17.93■□□□□ 0.46
SMC4-209ENST00000468653 PEX2P28328 305 aa17.93■□□□□ 0.46
SMC4-209ENST00000468653 GPC1P35052 558 aa17.93■□□□□ 0.46
SMC4-209ENST00000468653 CASP9P55211 416 aa17.93■□□□□ 0.46
SMC4-209ENST00000468653 OLR1P78380 273 aa17.93■□□□□ 0.46
SMC4-209ENST00000468653 COL9A2Q14055 689 aaPredicted RBP17.93■□□□□ 0.46
SMC4-209ENST00000468653 ZNF528Q3MIS6 628 aa17.93■□□□□ 0.46
SMC4-209ENST00000468653 COX20Q5RI15 118 aa17.93■□□□□ 0.46
SMC4-209ENST00000468653 PRSS41Q7RTY9 318 aa17.93■□□□□ 0.46
SMC4-209ENST00000468653 RNF130Q86XS8 419 aa17.93■□□□□ 0.46
SMC4-209ENST00000468653 PTOV1Q86YD1 416 aa17.93■□□□□ 0.46
SMC4-209ENST00000468653 TMEM126BQ8IUX1 230 aa17.93■□□□□ 0.46
SMC4-209ENST00000468653 OR52E4Q8NGH9 312 aa17.93■□□□□ 0.46
SMC4-209ENST00000468653 OR4C6Q8NH72 309 aa17.93■□□□□ 0.46
SMC4-209ENST00000468653 FBXO30Q8TB52 745 aa17.93■□□□□ 0.46
SMC4-209ENST00000468653 NETO1Q8TDF5 533 aa17.93■□□□□ 0.46
SMC4-209ENST00000468653 N4BP2L2Q92802 583 aaPredicted RBP17.93■□□□□ 0.46
SMC4-209ENST00000468653 CHST8Q9H2A9 424 aa17.93■□□□□ 0.46
SMC4-209ENST00000468653 LYRM4Q9HD34 91 aa17.93■□□□□ 0.46
SMC4-209ENST00000468653 IRAK4Q9NWZ3 460 aa17.93■□□□□ 0.46
SMC4-209ENST00000468653 RAPGEFL1Q9UHV5 662 aa17.93■□□□□ 0.46
SMC4-209ENST00000468653 FAF1Q9UNN5 650 aaPredicted RBP17.93■□□□□ 0.46
SMC4-209ENST00000468653 ZNF780BQ9Y6R6 833 aa17.93■□□□□ 0.46
SMC4-209ENST00000468653 SPACA6W5XKT8 324 aa17.93■□□□□ 0.46
SMC4-209ENST00000468653 GALR3O60755 368 aaPredicted RBP17.92■□□□□ 0.46
SMC4-209ENST00000468653 CTSBP07858 339 aa17.92■□□□□ 0.46
SMC4-209ENST00000468653 NUDT7P0C024 238 aa17.92■□□□□ 0.46
SMC4-209ENST00000468653 C8orf89P0DMQ9 161 aa17.92■□□□□ 0.46
SMC4-209ENST00000468653 CSNK2A2P19784 350 aaPredicted RBP17.92■□□□□ 0.46
SMC4-209ENST00000468653 CDK9P50750 372 aaKnown RBP17.92■□□□□ 0.46
SMC4-209ENST00000468653 MVDP53602 400 aa17.92■□□□□ 0.46
SMC4-209ENST00000468653 VAC14Q08AM6 782 aa17.92■□□□□ 0.46
SMC4-209ENST00000468653 FADDQ13158 208 aa17.92■□□□□ 0.46
SMC4-209ENST00000468653 NR1D2Q14995 579 aa17.92■□□□□ 0.46
SMC4-209ENST00000468653 NR0B2Q15466 257 aa17.92■□□□□ 0.46
SMC4-209ENST00000468653 ADRM1Q16186 407 aa17.92■□□□□ 0.46
SMC4-209ENST00000468653 PRTGQ2VWP7 1150 aa17.92■□□□□ 0.46
SMC4-209ENST00000468653 USP53Q70EK8 1073 aa17.92■□□□□ 0.46
SMC4-209ENST00000468653 TMEM102Q8N9M5 508 aaPredicted RBP17.92■□□□□ 0.46
SMC4-209ENST00000468653 FAM110BQ8TC76 370 aa17.92■□□□□ 0.46
SMC4-209ENST00000468653 KLHL6Q8WZ60 621 aa17.92■□□□□ 0.46
SMC4-209ENST00000468653 CNRIP1Q96F85 164 aaPredicted RBP17.92■□□□□ 0.46
SMC4-209ENST00000468653 TMEM121BQ9BXQ6 578 aaPredicted RBP17.92■□□□□ 0.46
SMC4-209ENST00000468653 UGT2B28Q9BY64 529 aa17.92■□□□□ 0.46
SMC4-209ENST00000468653 KLHL4Q9C0H6 718 aa17.92■□□□□ 0.46
SMC4-209ENST00000468653 ANKHQ9HCJ1 492 aa17.92■□□□□ 0.46
SMC4-209ENST00000468653 SIRT3Q9NTG7 399 aaPredicted RBP17.92■□□□□ 0.46
SMC4-209ENST00000468653 GPATCH2Q9NW75 528 aa17.92■□□□□ 0.46
SMC4-209ENST00000468653 C15orf41Q9Y2V0 281 aa17.92■□□□□ 0.46
SMC4-209ENST00000468653 DNAH14Q0VDD8 3507 aa17.92■□□□□ 0.46
SMC4-209ENST00000468653 MYO1GB0I1T2 1018 aa17.91■□□□□ 0.46
SMC4-209ENST00000468653 PATE3B3GLJ2 98 aa17.91■□□□□ 0.46
SMC4-209ENST00000468653 TPST1O60507 370 aa17.91■□□□□ 0.46
SMC4-209ENST00000468653 DNAJB6O75190 326 aa17.91■□□□□ 0.46
SMC4-209ENST00000468653 ETFAP13804 333 aa17.91■□□□□ 0.46
SMC4-209ENST00000468653 FEN1P39748 380 aaKnown RBP17.91■□□□□ 0.46
SMC4-209ENST00000468653 PRIM2P49643 509 aa17.91■□□□□ 0.46
SMC4-209ENST00000468653 ARL4DP49703 201 aa17.91■□□□□ 0.46
SMC4-209ENST00000468653 NDUFA9Q16795 377 aa17.91■□□□□ 0.46
SMC4-209ENST00000468653 GRAMD1BQ3KR37 738 aa17.91■□□□□ 0.46
SMC4-209ENST00000468653 FAM98BQ52LJ0 330 aaKnown RBP17.91■□□□□ 0.46
SMC4-209ENST00000468653 GCNT6Q5T4J0 391 aa17.91■□□□□ 0.46
SMC4-209ENST00000468653 PDSS2Q86YH6 399 aa17.91■□□□□ 0.46
SMC4-209ENST00000468653 CCDC116Q8IYX3 515 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms