RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 MAPK1P28482 360 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 TMED10P49755 219 aaKnown RBP6.49□□□□□ -1.37
SCAF4-204ENST00000467731 MAPK12P53778 367 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 MAPK10P53779 464 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 OLR1P78380 273 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 MC2RQ01718 297 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 ZNF763Q0D2J5 394 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 TARDBPQ13148 414 aaKnown RBP eCLIP6.49□□□□□ -1.373e-6■□□□□ 9.1
SCAF4-204ENST00000467731 UBAP2LQ14157 1087 aaKnown RBP6.49□□□□□ -1.37
SCAF4-204ENST00000467731 FAM214AQ32MH5 1076 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 C3orf38Q5JPI3 329 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 MARCH9Q86YJ5 346 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 SHISA5Q8N114 240 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 SLC38A9Q8NBW4 561 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 OR5T3Q8NGG3 340 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 OR9I1Q8NGQ6 314 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 CDC26Q8NHZ8 85 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 GFM2Q969S9 779 aaKnown RBP6.49□□□□□ -1.37
SCAF4-204ENST00000467731 TEX37Q96LM6 180 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 RTKNQ9BST9 563 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 BRINP2Q9C0B6 783 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 B3GNT4Q9C0J1 378 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 ANKHQ9HCJ1 492 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 SAR1AQ9NR31 198 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 FBXO8Q9NRD0 319 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 ASIC5Q9NY37 505 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 DLL3Q9NYJ7 618 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 ARMCX1Q9P291 453 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 NDOR1Q9UHB4 597 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 TMEM184BQ9Y519 407 aaPredicted RBP6.49□□□□□ -1.37
SCAF4-204ENST00000467731 GPR45Q9Y5Y3 372 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 GPC6Q9Y625 555 aaPredicted RBP6.49□□□□□ -1.37
SCAF4-204ENST00000467731 LOC400499M0QZD8 3231 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 CCDC187A0A096LP49 1063 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 B4E171 279 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 H0Y3Z8 333 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 FCHO1O14526 889 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 PLD2O14939 933 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 DNAJB6O75190 326 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 RDH16O75452 317 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 LRATO95237 230 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 NSA2O95478 260 aaKnown RBP6.49□□□□□ -1.37
SCAF4-204ENST00000467731 NTRK1P04629 796 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 PRPS2P11908 318 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 BTF3P20290 206 aaKnown RBP6.49□□□□□ -1.37
SCAF4-204ENST00000467731 TSPAN7P41732 249 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 ARSFP54793 590 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 EMP3P54852 163 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 TAS2R50P59544 299 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 SLAMF1Q13291 335 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 EIF3IQ13347 325 aaKnown RBP6.49□□□□□ -1.37
SCAF4-204ENST00000467731 SLC9A5Q14940 896 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 RPS6KA2Q15349 733 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 GSTA3Q16772 222 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 RHBDD2Q6NTF9 364 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 CLNKQ7Z7G1 428 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 TMPRSS12Q86WS5 348 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 ZCCHC7Q8N3Z6 543 aaKnown RBP6.49□□□□□ -1.37
SCAF4-204ENST00000467731 TRIML2Q8N7C3 387 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 ADAMTS14Q8WXS8 1223 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 MMABQ96EY8 250 aaPredicted RBP6.49□□□□□ -1.37
SCAF4-204ENST00000467731 VPS50Q96JG6 964 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 QRFPRQ96P65 431 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 LRRC37BQ96QE4 947 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 ROGDIQ9GZN7 287 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 ACTL8Q9H568 366 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 ZNF385DQ9H6B1 395 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 SDR39U1Q9NRG7 319 aaPredicted RBP6.49□□□□□ -1.37
SCAF4-204ENST00000467731 TXLNGQ9NUQ3 528 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 FAIMQ9NVQ4 179 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 SLC39A1Q9NY26 324 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 PISDQ9UG56 409 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 ATPIF1Q9UII2 106 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 ADAM29Q9UKF5 820 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 FBXW2Q9UKT8 454 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 B3GALT1Q9Y5Z6 326 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 MAU2Q9Y6X3 613 aa6.49□□□□□ -1.37
SCAF4-204ENST00000467731 A0A1B0GX78 115 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 C9JVG2 144 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 ANKRD28O15084 1053 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 B3GALT2O43825 422 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 CCDC22O60826 627 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 DCTN3O75935 186 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 FAM58BPP0C7Q3 252 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 CD1EP15812 388 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 DDX5P17844 614 aaKnown RBP6.48□□□□□ -1.37
SCAF4-204ENST00000467731 RAB15P59190 212 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 STX1BP61266 288 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 UFM1P61960 85 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 MAT1AQ00266 395 aaKnown RBP6.48□□□□□ -1.37
SCAF4-204ENST00000467731 C1orf189Q5VU69 101 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 MRM1Q6IN84 353 aaKnown RBP6.48□□□□□ -1.37
SCAF4-204ENST00000467731 PAOXQ6QHF9 649 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 TMEM132CQ8N3T6 1108 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 KRTCAP2Q8N6L1 136 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 FITM2Q8N6M3 262 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 ARL6IP6Q8N6S5 226 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.48□□□□□ -1.37
SCAF4-204ENST00000467731 PROKR1Q8TCW9 393 aa6.48□□□□□ -1.37
SCAF4-204ENST00000467731 C16orf78Q8WTQ4 265 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms