RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 DCDC1P59894 354 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 NDUFAF5Q5TEU4 345 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 TMEM164Q5U3C3 297 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 AFMIDQ63HM1 303 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 CWF19L1Q69YN2 538 aaKnown RBP13.19□□□□□ -0.3
BRAT1-203ENST00000467558 ZNF551Q7Z340 670 aaPredicted RBP13.19□□□□□ -0.3
BRAT1-203ENST00000467558 LIMS2Q7Z4I7 341 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 GALNT15Q8N3T1 639 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 KLHL36Q8N4N3 616 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 PHOSPHO1Q8TCT1 267 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 BCL7CQ8WUZ0 217 aaPredicted RBP13.19□□□□□ -0.3
BRAT1-203ENST00000467558 PPP1R14AQ96A00 147 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 EFHD2Q96C19 240 aaPredicted RBP13.19□□□□□ -0.3
BRAT1-203ENST00000467558 PTCHD1Q96NR3 888 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 TPSD1Q9BZJ3 242 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 PITHD1Q9GZP4 211 aaPredicted RBP13.19□□□□□ -0.3
BRAT1-203ENST00000467558 PREBQ9HCU5 417 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 VAPAQ9P0L0 249 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 ABI3Q9P2A4 366 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 BTNL2Q9UIR0 455 aa13.19□□□□□ -0.3
BRAT1-203ENST00000467558 CHRM5P08912 532 aaPredicted RBP13.18□□□□□ -0.3
BRAT1-203ENST00000467558 CLCN2P51788 898 aa13.18□□□□□ -0.3
BRAT1-203ENST00000467558 TAS2R38P59533 333 aa13.18□□□□□ -0.3
BRAT1-203ENST00000467558 TUBA3CQ13748 450 aa13.18□□□□□ -0.3
BRAT1-203ENST00000467558 DTWD1Q8N5C7 304 aa13.18□□□□□ -0.3
BRAT1-203ENST00000467558 C7orf57Q8NEG2 295 aa13.18□□□□□ -0.3
BRAT1-203ENST00000467558 PELOQ9BRX2 385 aaKnown RBP13.18□□□□□ -0.3
BRAT1-203ENST00000467558 SERINC1Q9NRX5 453 aa13.18□□□□□ -0.3
BRAT1-203ENST00000467558 GALNT8Q9NY28 637 aa13.18□□□□□ -0.3
BRAT1-203ENST00000467558 FAAHO00519 579 aa13.18□□□□□ -0.3
BRAT1-203ENST00000467558 AKAP8O43823 692 aaKnown RBP13.18□□□□□ -0.3
BRAT1-203ENST00000467558 MMP2P08253 660 aa13.18□□□□□ -0.3
BRAT1-203ENST00000467558 ZNF823P16415 610 aa13.18□□□□□ -0.3
BRAT1-203ENST00000467558 PORP16435 677 aaPredicted RBP13.18□□□□□ -0.3
BRAT1-203ENST00000467558 RHCEP18577 417 aa13.18□□□□□ -0.3
BRAT1-203ENST00000467558 ARNTP27540 789 aa13.18□□□□□ -0.3
BRAT1-203ENST00000467558 TXNL4AP83876 142 aaKnown RBP13.18□□□□□ -0.3
BRAT1-203ENST00000467558 TLR1Q15399 786 aa13.18□□□□□ -0.3
BRAT1-203ENST00000467558 ZCCHC12Q6PEW1 402 aa13.18□□□□□ -0.3
BRAT1-203ENST00000467558 OSTF1Q92882 214 aa13.18□□□□□ -0.3
BRAT1-203ENST00000467558 UTP4Q969X6 686 aaKnown RBP13.18□□□□□ -0.3
BRAT1-203ENST00000467558 TNFRSF10DQ9UBN6 386 aa13.18□□□□□ -0.3
BRAT1-203ENST00000467558 MAGEB3O15480 346 aa13.18□□□□□ -0.3
BRAT1-203ENST00000467558 PCDHGA12O60330 932 aa13.18□□□□□ -0.3
BRAT1-203ENST00000467558 FLYWCH1Q4VC44 716 aa13.18□□□□□ -0.3
BRAT1-203ENST00000467558 C6orf141Q5SZD1 244 aa13.18□□□□□ -0.3
BRAT1-203ENST00000467558 OLIG1Q8TAK6 271 aa13.18□□□□□ -0.3
BRAT1-203ENST00000467558 TIMM29Q9BSF4 260 aa13.18□□□□□ -0.3
BRAT1-203ENST00000467558 ITPAQ9BY32 194 aa13.18□□□□□ -0.3
BRAT1-203ENST00000467558 ELL3Q9HB65 397 aaPredicted RBP13.18□□□□□ -0.3
BRAT1-203ENST00000467558 OBP2AQ9NY56 170 aa13.18□□□□□ -0.3
BRAT1-203ENST00000467558 TAS2R7Q9NYW3 318 aa13.18□□□□□ -0.3
BRAT1-203ENST00000467558 ANKMY1Q9P2S6 941 aa13.18□□□□□ -0.3
BRAT1-203ENST00000467558 DENRO43583 198 aaKnown RBP13.17□□□□□ -0.3
BRAT1-203ENST00000467558 DUX1O43812 170 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 SEMA3DO95025 777 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 IRS1P35568 1242 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 MMP12P39900 470 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 MCCD1P59942 119 aaPredicted RBP13.17□□□□□ -0.3
BRAT1-203ENST00000467558 RPS26P62854 115 aaKnown RBP13.17□□□□□ -0.3
BRAT1-203ENST00000467558 ACVR1Q04771 509 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 CYP27C1Q4G0S4 372 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 PLET1Q6UQ28 207 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 TMEM107Q6UX40 140 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 C12orf40Q86WS4 652 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 PLPP6Q8IY26 295 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 PROKR1Q8TCW9 393 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 FAR1Q8WVX9 515 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 TP53INP1Q96A56 240 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 BIRC8Q96P09 236 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 ZFYVE21Q9BQ24 234 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 RBCK1Q9BYM8 510 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 ZNF451Q9Y4E5 1061 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 LRRC37AA6NMS7 1700 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 LSM1O15116 133 aaKnown RBP13.17□□□□□ -0.3
BRAT1-203ENST00000467558 IFI30P13284 250 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 CDH11P55287 796 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 VEZF1Q14119 521 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 IRF4Q15306 451 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 DUS1LQ6P1R4 473 aaKnown RBP13.17□□□□□ -0.3
BRAT1-203ENST00000467558 ENPP6Q6UWR7 440 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 ZNF550Q7Z398 422 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 GALNT12Q8IXK2 581 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 ECHDC3Q96DC8 303 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 TGM7Q96PF1 710 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 INPP5KQ9BT40 448 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 OR6C2Q9NZP2 312 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 C19orf25Q9UFG5 118 aaPredicted RBP13.17□□□□□ -0.3
BRAT1-203ENST00000467558 B4GALT3O60512 393 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 AK1P00568 194 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 CR2P20023 1033 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 GABRA3P34903 492 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 NUDT1P36639 197 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 SOX9P48436 509 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 ARFIP1P53367 373 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 MRPS21P82921 87 aaKnown RBP13.17□□□□□ -0.3
BRAT1-203ENST00000467558 IL18Q14116 193 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 DDI2Q5TDH0 399 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 TCEANCQ8N8B7 351 aa13.17□□□□□ -0.3
BRAT1-203ENST00000467558 SLC25A36Q96CQ1 311 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms