RNA–Protein interactions for RNA: ENST00000466745.5

SFPQ-204, Transcript of splicing factor proline and glutamine rich, human

TSL 2

Gene SFPQ, Length 662 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFPQ-204	ENST00000466745	OR1I1	O60431	355 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	NDUFS3	O75489	264 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	VAPB	O95292	243 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	ALDOC	P09972	364 aa	Known RBP	4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	RFPL3S	P0C7P2	107 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	SLC35G4	P0C7Q5	338 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	OR56A5	P0C7T3	313 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	CCL4	P13236	92 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	CHN1	P15882	459 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	NMBR	P28336	390 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	CD1C	P29017	333 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	FMO4	P31512	558 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	NPY2R	P49146	381 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	ZNF140	P52738	457 aa	Predicted RBP	4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	XIAP	P98170	497 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	ABR	Q12979	859 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	TSTA3	Q13630	321 aa	Predicted RBP	4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	THOC5	Q13769	683 aa	Known RBP	4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	KIR2DS5	Q14953	304 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	SIX1	Q15475	284 aa	Predicted RBP	4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	RPE65	Q16518	533 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	COL28A1	Q2UY09	1125 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	ANXA2R	Q3ZCQ2	193 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	KCTD11	Q693B1	232 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	PTRHD1	Q6GMV3	140 aa	Known RBP	4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	DUS1L	Q6P1R4	473 aa	Known RBP	4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	TTC27	Q6P3X3	843 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	TMEM71	Q6P5X7	295 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	AFTPH	Q6ULP2	937 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	C4orf22	Q6V702	233 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	ZNF813	Q6ZN06	617 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	FAM83H	Q6ZRV2	1179 aa	Predicted RBP	4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	HOOK3	Q86VS8	718 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	PRIMA1	Q86XR5	153 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	ZNF547	Q8IVP9	402 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	UEVLD	Q8IX04	471 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	SFRP1	Q8N474	314 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	C2orf73	Q8N5S3	287 aa	Predicted RBP	4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	CLDN19	Q8N6F1	224 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	DDHD1	Q8NEL9	900 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	OR4E2	Q8NGC2	313 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	OR4L1	Q8NH43	312 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	OSR1	Q8TAX0	266 aa	Predicted RBP	4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	GSDMB	Q8TAX9	411 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	GRK7	Q8WTQ7	553 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	HEXDC	Q8WVB3	486 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	KCNE4	Q8WWG9	221 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	ART4	Q93070	314 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	KTI12	Q96EK9	354 aa	Predicted RBP	4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	ZNF514	Q96K75	400 aa	Predicted RBP	4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	ZNF778	Q96MU6	729 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	TIMM29	Q9BSF4	260 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	CCM2	Q9BSQ5	444 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	DDX47	Q9H0S4	455 aa	Known RBP	4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	VPS37B	Q9H9H4	285 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	PPAN	Q9NQ55	473 aa	Known RBP	4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	RASSF1	Q9NS23	344 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	THSD1	Q9NS62	852 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	ABCF3	Q9NUQ8	709 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	IRAK4	Q9NWZ3	460 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	SLC39A1	Q9NY26	324 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	IL1RAPL1	Q9NZN1	696 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	ZNF624	Q9P2J8	865 aa	Predicted RBP	4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	C11orf21	Q9P2W6	132 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	CIDEB	Q9UHD4	219 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	SNX12	Q9UMY4	172 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	SAR1B	Q9Y6B6	198 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	PRSS21	Q9Y6M0	314 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	COLEC10	Q9Y6Z7	277 aa		4.55	□□□□□ -1.68
SFPQ-204	ENST00000466745	CHD5	Q8TDI0	1954 aa		4.54	□□□□□ -1.68
SFPQ-204	ENST00000466745	GOLGA4	Q13439	2230 aa	Known RBP	4.54	□□□□□ -1.68
SFPQ-204	ENST00000466745	SDR42E2	A6NKP2	422 aa		4.54	□□□□□ -1.68
SFPQ-204	ENST00000466745	PRSS47	A8MTI9	375 aa		4.54	□□□□□ -1.68
SFPQ-204	ENST00000466745	IQCF5	A8MTL0	148 aa		4.54	□□□□□ -1.68
SFPQ-204	ENST00000466745	GPR89A	B7ZAQ6	455 aa		4.54	□□□□□ -1.68
SFPQ-204	ENST00000466745		E5RI56	91 aa		4.54	□□□□□ -1.68
SFPQ-204	ENST00000466745	AP3B1	O00203	1094 aa		4.54	□□□□□ -1.68
SFPQ-204	ENST00000466745	NTN3	O00634	580 aa	Predicted RBP	4.54	□□□□□ -1.68
SFPQ-204	ENST00000466745	GAPDHS	O14556	408 aa	Predicted RBP	4.54	□□□□□ -1.68
SFPQ-204	ENST00000466745	CHUK	O15111	745 aa		4.54	□□□□□ -1.68
SFPQ-204	ENST00000466745	PFDN6	O15212	129 aa		4.54	□□□□□ -1.68
SFPQ-204	ENST00000466745	KCNJ13	O60928	360 aa		4.54	□□□□□ -1.68
SFPQ-204	ENST00000466745	FTH1	P02794	183 aa		4.54	□□□□□ -1.68
SFPQ-204	ENST00000466745	F7	P08709	466 aa	Predicted RBP	4.54	□□□□□ -1.68
SFPQ-204	ENST00000466745	GPR89B	P0CG08	455 aa		4.54	□□□□□ -1.68
SFPQ-204	ENST00000466745	TCP1	P17987	556 aa	Known RBP	4.54	□□□□□ -1.68
SFPQ-204	ENST00000466745	XRCC1	P18887	633 aa	Predicted RBP	4.54	□□□□□ -1.68
SFPQ-204	ENST00000466745	POLR2C	P19387	275 aa	Predicted RBP	4.54	□□□□□ -1.68
SFPQ-204	ENST00000466745	CNTF	P26441	200 aa		4.54	□□□□□ -1.68
SFPQ-204	ENST00000466745	PDHA2	P29803	388 aa		4.54	□□□□□ -1.68
SFPQ-204	ENST00000466745	ETV5	P41161	510 aa		4.54	□□□□□ -1.68
SFPQ-204	ENST00000466745	NSG1	P42857	185 aa		4.54	□□□□□ -1.68
SFPQ-204	ENST00000466745	ABCG1	P45844	678 aa		4.54	□□□□□ -1.68
SFPQ-204	ENST00000466745	LEPR	P48357	1165 aa	Known RBP	4.54	□□□□□ -1.68
SFPQ-204	ENST00000466745	LIMK2	P53671	638 aa		4.54	□□□□□ -1.68
SFPQ-204	ENST00000466745	EIF3B	P55884	814 aa	Known RBP	4.54	□□□□□ -1.68
SFPQ-204	ENST00000466745	HSPA14	Q0VDF9	509 aa		4.54	□□□□□ -1.68
SFPQ-204	ENST00000466745	PRKAA1	Q13131	559 aa		4.54	□□□□□ -1.68
SFPQ-204	ENST00000466745	DHX34	Q14147	1143 aa	Known RBP	4.54	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 65 ms