RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 ZNF317Q96PQ6 595 aaPredicted RBP9.13□□□□□ -0.95
RTFDC1-205ENST00000466260 SMC6Q96SB8 1091 aa9.13□□□□□ -0.95
RTFDC1-205ENST00000466260 TBCDQ9BTW9 1192 aa9.13□□□□□ -0.95
RTFDC1-205ENST00000466260 NPLQ9BXD5 320 aaPredicted RBP9.13□□□□□ -0.95
RTFDC1-205ENST00000466260 ROGDIQ9GZN7 287 aa9.13□□□□□ -0.95
RTFDC1-205ENST00000466260 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.13□□□□□ -0.95
RTFDC1-205ENST00000466260 ELOVL6Q9H5J4 265 aa9.13□□□□□ -0.95
RTFDC1-205ENST00000466260 ANKRD10Q9NXR5 420 aa9.13□□□□□ -0.95
RTFDC1-205ENST00000466260 DCDC2Q9UHG0 476 aa9.13□□□□□ -0.95
RTFDC1-205ENST00000466260 EMCNQ9ULC0 261 aa9.13□□□□□ -0.95
RTFDC1-205ENST00000466260 MRPS33Q9Y291 106 aaKnown RBP9.13□□□□□ -0.95
RTFDC1-205ENST00000466260 CAPN7Q9Y6W3 813 aa9.13□□□□□ -0.95
RTFDC1-205ENST00000466260 SPACA6W5XKT8 324 aa9.13□□□□□ -0.95
RTFDC1-205ENST00000466260 SHANK1Q9Y566 2161 aa9.13□□□□□ -0.95
RTFDC1-205ENST00000466260 EML6Q6ZMW3 1958 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 TCRBV16S1A1N1A0A5B0 115 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 TMEM120BA0PK00 339 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 DYTNA2CJ06 578 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 SAGE2PA6NJ88 616 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 H0YIV9 168 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 CLDN4O14493 209 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 MAN1A2O60476 641 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 UGDHO60701 494 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 SPAG7O75391 227 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 MYO1DO94832 1006 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 SORBS2O94875 1100 aaKnown RBP9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 ZWINTO95229 277 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 WISP1O95388 367 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 OTCP00480 354 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 MYL2P10916 166 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 ICAM2P13598 275 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 KRT4P19013 534 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 HMOX2P30519 316 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 SERPINB1P30740 379 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 RASSF2P50749 326 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 SEC24CP53992 1094 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 SOX8P57073 446 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 SLC26A5P58743 744 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 HERVK_113P63132 956 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 KCNC4Q03721 635 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 STX4Q12846 297 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 INPP5JQ15735 1006 aaPredicted RBP9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 EXT1Q16394 746 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 PLEKHN1Q494U1 663 aaPredicted RBP9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 TMEM35AQ53FP2 167 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 FRG2Q64ET8 278 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 CYP20A1Q6UW02 462 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 RIPOR1Q6ZS17 1223 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 CUZD1Q86UP6 607 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 EXOC3L1Q86VI1 746 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 HPS6Q86YV9 775 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 CRLF3Q8IUI8 442 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 SLC22A9Q8IVM8 553 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 OR4N5Q8IXE1 308 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 SRRM1Q8IYB3 904 aaKnown RBP9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 CISD2Q8N5K1 135 aaKnown RBP9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 CDYL2Q8N8U2 506 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 ADAMTS18Q8TE60 1221 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 DOK4Q8TEW6 326 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 THAP3Q8WTV1 239 aaPredicted RBP9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 CKAP2Q8WWK9 683 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 FRG2BQ96QU4 278 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 KCNA7Q96RP8 456 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 NTMT1Q9BV86 223 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 ERVK-6Q9BXR3 956 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 MRPL1Q9BYD6 325 aaKnown RBP9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 SHCBP1LQ9BZQ2 653 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 IQCGQ9H095 443 aaKnown RBP9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 FARSBQ9NSD9 589 aaKnown RBP9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 KLHL14Q9P2G3 628 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 ADGRE2Q9UHX3 823 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 SLC12A4Q9UP95 1085 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 B3GNT3Q9Y2A9 372 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 ARL2BPQ9Y2Y0 163 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 MMACHCQ9Y4U1 282 aa9.12□□□□□ -0.95
RTFDC1-205ENST00000466260 IGKV3D-11A0A0A0MRZ8 115 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 TRBV11-1A0A0K0K1C0 115 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 A0A1W2PQ72 361 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 GLOD5A6NK44 160 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 TM9SF1O15321 606 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 EEDO75530 441 aaKnown RBP9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 WDPCPO95876 746 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 PDYNP01213 254 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 PROCP04070 461 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 CYC1P08574 325 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 TNNI3P19429 210 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 PTX3P26022 381 aaPredicted RBP9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 SOX11P35716 441 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 PIK3CBP42338 1070 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 HTR6P50406 440 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 TAS2R50P59544 299 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 AP2B1P63010 937 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 TNFRSF17Q02223 184 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 OC90Q02509 493 aaPredicted RBP9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 SRSF11Q05519 484 aaKnown RBP9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 RCN2Q14257 317 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 ZNF169Q14929 603 aaPredicted RBP9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 C18orf63Q68DL7 685 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 PLAG1Q6DJT9 500 aa9.11□□□□□ -0.95
RTFDC1-205ENST00000466260 METTL2BQ6P1Q9 378 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms