RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 NIP7Q9Y221 180 aaKnown RBP eCLIP1.56□□□□□ -2.16
NUCKS1-202ENST00000464938 EXOC6BQ9Y2D4 811 aa1.56□□□□□ -2.16
NUCKS1-202ENST00000464938 MRPS2Q9Y399 296 aaKnown RBP1.56□□□□□ -2.16
NUCKS1-202ENST00000464938 OR1A2Q9Y585 309 aa1.56□□□□□ -2.16
NUCKS1-202ENST00000464938 SNX5Q9Y5X3 404 aa1.56□□□□□ -2.16
NUCKS1-202ENST00000464938 GPRASP1Q5JY77 1395 aa1.56□□□□□ -2.16
NUCKS1-202ENST00000464938 NPC1L1Q9UHC9 1359 aa1.56□□□□□ -2.16
NUCKS1-202ENST00000464938 IGLV4-3A0A075B6K6 122 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 TRBV2A0A0J9YWF9 115 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 A0A0J9YWU9 116 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 SH3PXD2BA1X283 911 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 BCLAF3A2AJT9 711 aaKnown RBP1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 OR5H15A6NDH6 313 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 TRIM64A6NGJ6 449 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 TRIM64BA6NI03 449 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 ZNF724A8MTY0 619 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 PALM2-AKAP2B1ALY0 433 aaPredicted RBP1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 TLR4O00206 839 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 SORBS2O94875 1100 aaKnown RBP1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 OR6A2O95222 327 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 MT-ND3P03897 115 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 CHRNGP07510 517 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 SERPINF2P08697 491 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 ABHD2P08910 425 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 HMOX1P09601 288 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 SBK2P0C263 348 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 CCDC159P0C7I6 412 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 TRIM49P0CI25 452 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 TRIM49CP0CI26 452 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 THEGLP0DJG4 465 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 PCP11498 1178 aaKnown RBP1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 AOC1P19801 751 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 ACP1P24666 158 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 RPL9P32969 192 aaKnown RBP1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 ETV5P41161 510 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 CNN1P51911 297 aaKnown RBP1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 UBXN1Q04323 297 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 PAX8Q06710 450 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 AP1B1Q10567 949 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 LCP2Q13094 533 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 CBX3Q13185 183 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 HEPACAMQ14CZ8 416 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 CDC37Q16543 378 aaPredicted RBP1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 CCL14Q16627 93 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 KNOP1Q1ED39 458 aaKnown RBP1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 WSCD2Q2TBF2 565 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 POM121L1PQ3SYA9 428 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 HERC4Q5GLZ8 1057 aaPredicted RBP1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 DOK6Q6PKX4 331 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 DLEU7Q6UYE1 221 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 RPAINQ86UA6 219 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 FAM131BQ86XD5 332 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 TBC1D10CQ8IV04 446 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 WDR49Q8IV35 697 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 LMNTD2Q8IXW0 634 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 PEX5LQ8IYB4 626 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 Q8N377 158 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 CSNK1G2-AS1Q8NCQ2 148 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 C17orf47Q8NEP4 570 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 PSMA8Q8TAA3 256 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 ST7LQ8TDW4 575 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 ATP6V0A1Q93050 837 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 TMEM186Q96B77 213 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 DTD2Q96FN9 168 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 SLC45A3Q96JT2 553 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 AGAP3Q96P47 875 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 AGPAT1Q99943 283 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 FAM213AQ9BRX8 229 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 ZNF577Q9BSK1 485 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 UBAC1Q9BSL1 405 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 CCDC28BQ9BUN5 200 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 LRRC61Q9BV99 259 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 ACAT2Q9BWD1 397 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 TRIM15Q9C019 465 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 WWP1Q9H0M0 922 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 CARD9Q9H257 536 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 TUBB1Q9H4B7 451 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 MARCH7Q9H992 704 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 DBNDD1Q9H9R9 158 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 GNB4Q9HAV0 340 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 ZCCHC3Q9NUD5 404 aaKnown RBP1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 MED17Q9NVC6 651 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 NUDT4Q9NZJ9 180 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 IL19Q9UHD0 177 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 TEKT2Q9UIF3 430 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 TSPAN16Q9UKR8 245 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 EXOC7Q9UPT5 735 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 TDRKHQ9Y2W6 561 aaKnown RBP1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 SH3GLB1Q9Y371 365 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 MYH15Q9Y2K3 1946 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 PCNX3Q9H6A9 2034 aa1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 COL5A2P05997 1499 aaPredicted RBP1.55□□□□□ -2.16
NUCKS1-202ENST00000464938 IGKV3D-15A0A087WSY6 115 aa1.54□□□□□ -2.16
NUCKS1-202ENST00000464938 IGHV3-16A0A0C4DH30 117 aa1.54□□□□□ -2.16
NUCKS1-202ENST00000464938 A0A1B0GU03 582 aa1.54□□□□□ -2.16
NUCKS1-202ENST00000464938 ASB14A6NK59 587 aa1.54□□□□□ -2.16
NUCKS1-202ENST00000464938 FBP2O00757 339 aa1.54□□□□□ -2.16
NUCKS1-202ENST00000464938 CHEK1O14757 476 aa1.54□□□□□ -2.16
NUCKS1-202ENST00000464938 ARPC1BO15143 372 aaKnown RBP1.54□□□□□ -2.16
NUCKS1-202ENST00000464938 TXNL1O43396 289 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms