RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 DDIASQ8IXT1 998 aa17.77■□□□□ 0.44
LMNB1-204ENST00000463908 EFCAB3Q8N7B9 438 aa17.77■□□□□ 0.44
LMNB1-204ENST00000463908 TMEM102Q8N9M5 508 aaPredicted RBP17.77■□□□□ 0.44
LMNB1-204ENST00000463908 APOBEC4Q8WW27 367 aaKnown RBP17.77■□□□□ 0.44
LMNB1-204ENST00000463908 IMMP1LQ96LU5 166 aa17.77■□□□□ 0.44
LMNB1-204ENST00000463908 BBC3Q96PG8 261 aaPredicted RBP17.77■□□□□ 0.44
LMNB1-204ENST00000463908 ZNF700Q9H0M5 742 aa17.77■□□□□ 0.44
LMNB1-204ENST00000463908 RPF2Q9H7B2 306 aaKnown RBP17.77■□□□□ 0.44
LMNB1-204ENST00000463908 MCM8Q9UJA3 840 aa17.77■□□□□ 0.44
LMNB1-204ENST00000463908 MYOCOSA0A1B0GUC4 107 aa17.76■□□□□ 0.43
LMNB1-204ENST00000463908 GLOD5A6NK44 160 aa17.76■□□□□ 0.43
LMNB1-204ENST00000463908 PGRMC2O15173 223 aa17.76■□□□□ 0.43
LMNB1-204ENST00000463908 RGS14O43566 566 aa17.76■□□□□ 0.43
LMNB1-204ENST00000463908 LDB3O75112 727 aa17.76■□□□□ 0.43
LMNB1-204ENST00000463908 DNAJB5O75953 348 aa17.76■□□□□ 0.43
LMNB1-204ENST00000463908 AIFM1O95831 613 aa17.76■□□□□ 0.43
LMNB1-204ENST00000463908 NR1D1P20393 614 aa17.76■□□□□ 0.43
LMNB1-204ENST00000463908 TIA1P31483 386 aaKnown RBP eCLIP17.76■□□□□ 0.43
LMNB1-204ENST00000463908 MAPK12P53778 367 aa17.76■□□□□ 0.43
LMNB1-204ENST00000463908 ACSM2AQ08AH3 577 aa17.76■□□□□ 0.43
LMNB1-204ENST00000463908 Q0VFX4 171 aa17.76■□□□□ 0.43
LMNB1-204ENST00000463908 SLC13A2Q13183 592 aa17.76■□□□□ 0.43
LMNB1-204ENST00000463908 RFTN2Q52LD8 501 aaPredicted RBP17.76■□□□□ 0.43
LMNB1-204ENST00000463908 XKR7Q5GH72 579 aa17.76■□□□□ 0.43
LMNB1-204ENST00000463908 ATG16L1Q676U5 607 aa17.76■□□□□ 0.43
LMNB1-204ENST00000463908 ACSM2BQ68CK6 577 aa17.76■□□□□ 0.43
LMNB1-204ENST00000463908 OR4N5Q8IXE1 308 aa17.76■□□□□ 0.43
LMNB1-204ENST00000463908 MMP21Q8N119 569 aa17.76■□□□□ 0.43
LMNB1-204ENST00000463908 FER1L6-AS2Q96M78 137 aa17.76■□□□□ 0.43
LMNB1-204ENST00000463908 LRTM1Q9HBL6 345 aa17.76■□□□□ 0.43
LMNB1-204ENST00000463908 INTS9Q9NV88 658 aaKnown RBP17.76■□□□□ 0.43
LMNB1-204ENST00000463908 C1orf109Q9NX04 203 aa17.76■□□□□ 0.43
LMNB1-204ENST00000463908 MRPS33Q9Y291 106 aaKnown RBP17.76■□□□□ 0.43
LMNB1-204ENST00000463908 SPACA6W5XKT8 324 aa17.76■□□□□ 0.43
LMNB1-204ENST00000463908 SCN2AQ99250 2005 aa17.76■□□□□ 0.43
LMNB1-204ENST00000463908 NUP210LQ5VU65 1888 aa17.75■□□□□ 0.43
LMNB1-204ENST00000463908 ATP6AP2A0A1C7CYW4 349 aa17.75■□□□□ 0.43
LMNB1-204ENST00000463908 ARHGAP10A1A4S6 786 aa17.75■□□□□ 0.43
LMNB1-204ENST00000463908 LSM1O15116 133 aaKnown RBP17.75■□□□□ 0.43
LMNB1-204ENST00000463908 PCDH7O60245 1069 aa17.75■□□□□ 0.43
LMNB1-204ENST00000463908 FGF17O60258 216 aa17.75■□□□□ 0.43
LMNB1-204ENST00000463908 SEC22BO75396 215 aa17.75■□□□□ 0.43
LMNB1-204ENST00000463908 SKAP2O75563 359 aaPredicted RBP17.75■□□□□ 0.43
LMNB1-204ENST00000463908 ATP6AP2O75787 350 aa17.75■□□□□ 0.43
LMNB1-204ENST00000463908 HPP00738 406 aa17.75■□□□□ 0.43
LMNB1-204ENST00000463908 PPP2R1BP30154 601 aa17.75■□□□□ 0.43
LMNB1-204ENST00000463908 OR4D2P58180 307 aa17.75■□□□□ 0.43
LMNB1-204ENST00000463908 TRA2BP62995 288 aaKnown RBP17.75■□□□□ 0.43
LMNB1-204ENST00000463908 RHDQ02161 417 aa17.75■□□□□ 0.43
LMNB1-204ENST00000463908 ID2Q02363 134 aa17.75■□□□□ 0.43
LMNB1-204ENST00000463908 SFT2D3Q587I9 215 aa17.75■□□□□ 0.43
LMNB1-204ENST00000463908 NDUFAF5Q5TEU4 345 aa17.75■□□□□ 0.43
LMNB1-204ENST00000463908 NOXRED1Q6NXP6 359 aa17.75■□□□□ 0.43
LMNB1-204ENST00000463908 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.75■□□□□ 0.43
LMNB1-204ENST00000463908 C16orf78Q8WTQ4 265 aa17.75■□□□□ 0.43
LMNB1-204ENST00000463908 TANKQ92844 425 aa17.75■□□□□ 0.43
LMNB1-204ENST00000463908 METTL2AQ96IZ6 378 aaKnown RBP17.75■□□□□ 0.43
LMNB1-204ENST00000463908 FCRL1Q96LA6 429 aa17.75■□□□□ 0.43
LMNB1-204ENST00000463908 EBPLQ9BY08 206 aa17.75■□□□□ 0.43
LMNB1-204ENST00000463908 ALOXE3Q9BYJ1 711 aa17.75■□□□□ 0.43
LMNB1-204ENST00000463908 ZNF160Q9HCG1 818 aa17.75■□□□□ 0.43
LMNB1-204ENST00000463908 HEY2Q9UBP5 337 aa17.75■□□□□ 0.43
LMNB1-204ENST00000463908 GIMAP2Q9UG22 337 aa17.75■□□□□ 0.43
LMNB1-204ENST00000463908 CES1P1Q9UKY3 287 aa17.75■□□□□ 0.43
LMNB1-204ENST00000463908 PCDHA9Q9Y5H5 950 aa17.75■□□□□ 0.43
LMNB1-204ENST00000463908 BLACEA4D250 179 aa17.74■□□□□ 0.43
LMNB1-204ENST00000463908 SEC24DO94855 1032 aaPredicted RBP17.74■□□□□ 0.43
LMNB1-204ENST00000463908 ANXA4P09525 319 aaPredicted RBP17.74■□□□□ 0.43
LMNB1-204ENST00000463908 TLX1P31314 330 aaPredicted RBP17.74■□□□□ 0.43
LMNB1-204ENST00000463908 BUD31P41223 144 aaPredicted RBP17.74■□□□□ 0.43
LMNB1-204ENST00000463908 CCL11P51671 97 aa17.74■□□□□ 0.43
LMNB1-204ENST00000463908 RRADP55042 308 aa17.74■□□□□ 0.43
LMNB1-204ENST00000463908 SOX8P57073 446 aa17.74■□□□□ 0.43
LMNB1-204ENST00000463908 TAS2R50P59544 299 aa17.74■□□□□ 0.43
LMNB1-204ENST00000463908 IGLV3-21P80748 117 aaPredicted RBP17.74■□□□□ 0.43
LMNB1-204ENST00000463908 NR6A1Q15406 480 aa17.74■□□□□ 0.43
LMNB1-204ENST00000463908 PARP9Q8IXQ6 854 aa17.74■□□□□ 0.43
LMNB1-204ENST00000463908 EXD3Q8N9H8 876 aa17.74■□□□□ 0.43
LMNB1-204ENST00000463908 FAM76AQ8TAV0 307 aa17.74■□□□□ 0.43
LMNB1-204ENST00000463908 DNAJB14Q8TBM8 379 aa17.74■□□□□ 0.43
LMNB1-204ENST00000463908 CKAP2Q8WWK9 683 aa17.74■□□□□ 0.43
LMNB1-204ENST00000463908 ATP13A2Q9NQ11 1180 aa17.74■□□□□ 0.43
LMNB1-204ENST00000463908 C19orf25Q9UFG5 118 aaPredicted RBP17.74■□□□□ 0.43
LMNB1-204ENST00000463908 DLGAP4Q9Y2H0 992 aa17.74■□□□□ 0.43
LMNB1-204ENST00000463908 POLR3HQ9Y535 204 aaPredicted RBP17.74■□□□□ 0.43
LMNB1-204ENST00000463908 NSG1A0A0A6YYJ2 146 aa17.73■□□□□ 0.43
LMNB1-204ENST00000463908 A8MUA0 341 aa17.73■□□□□ 0.43
LMNB1-204ENST00000463908 DYNC1I1O14576 645 aa17.73■□□□□ 0.43
LMNB1-204ENST00000463908 KALRNO60229 2985 aa17.73■□□□□ 0.43
LMNB1-204ENST00000463908 PEX11AO75192 247 aa17.73■□□□□ 0.43
LMNB1-204ENST00000463908 CEACAM4O75871 244 aa17.73■□□□□ 0.43
LMNB1-204ENST00000463908 GPR75O95800 540 aa17.73■□□□□ 0.43
LMNB1-204ENST00000463908 CELA2AP08217 269 aa17.73■□□□□ 0.43
LMNB1-204ENST00000463908 NR2F6P10588 404 aa17.73■□□□□ 0.43
LMNB1-204ENST00000463908 TACR1P25103 407 aa17.73■□□□□ 0.43
LMNB1-204ENST00000463908 POLE2P56282 527 aa17.73■□□□□ 0.43
LMNB1-204ENST00000463908 FOLH1Q04609 750 aa17.73■□□□□ 0.43
LMNB1-204ENST00000463908 ACTN3Q08043 901 aaPredicted RBP17.73■□□□□ 0.43
LMNB1-204ENST00000463908 PDCD2Q16342 344 aaPredicted RBP17.73■□□□□ 0.43
LMNB1-204ENST00000463908 NFAM1Q8NET5 270 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms