RNA–Protein interactions for RNA: ENST00000463688.6

COMMD3-205, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,407 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-205ENST00000463688 SAMD14Q8IZD0 417 aaPredicted RBP12.54□□□□□ -0.4
COMMD3-205ENST00000463688 ST13P4Q8IZP2 240 aaPredicted RBP12.54□□□□□ -0.4
COMMD3-205ENST00000463688 CYP4Z2PQ8N1L4 340 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 SLC15A4Q8N697 577 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 TRPC4APQ8TEL6 797 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 DCAKDQ8WVC6 231 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 ASB15Q8WXK1 588 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 RELTQ969Z4 430 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 PHF21BQ96EK2 531 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 MTERF1Q99551 399 aaKnown RBP12.54□□□□□ -0.4
COMMD3-205ENST00000463688 C1QTNF3Q9BXJ4 246 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 SHCBP1LQ9BZQ2 653 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 HPF1Q9NWY4 346 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 XPR1Q9UBH6 696 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 MID2Q9UJV3 735 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 OSGIN2Q9Y236 505 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 CCDC88CQ9P219 2028 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 USP9YO00507 2555 aaPredicted RBP12.54□□□□□ -0.4
COMMD3-205ENST00000463688 SPTAN1Q13813 2472 aaKnown RBP12.54□□□□□ -0.4
COMMD3-205ENST00000463688 A0A0G2JN53 185 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 OR2W5A6NFC9 320 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 OR6C76A6NM76 312 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 C17orf105B2RV13 164 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 ACOT7O00154 380 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 NME2P1O60361 137 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 OR10H2O60403 315 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 ITGA10O75578 1167 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 GPR75O95800 540 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 ZNF24P17028 368 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 NME2P22392 152 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 ATP5F1P24539 256 aaPredicted RBP12.54□□□□□ -0.4
COMMD3-205ENST00000463688 TPP2P29144 1249 aaPredicted RBP12.54□□□□□ -0.4
COMMD3-205ENST00000463688 GSTM5P46439 218 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 SMSP52788 366 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 HERVK_113P63132 956 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 TNFRSF17Q02223 184 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 RASA2Q15283 850 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 ZRSR2Q15696 482 aaKnown RBP12.54□□□□□ -0.4
COMMD3-205ENST00000463688 FBXO48Q5FWF7 155 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 OR52E8Q6IFG1 317 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 MAMDC2Q7Z304 686 aaPredicted RBP12.54□□□□□ -0.4
COMMD3-205ENST00000463688 GHDCQ8N2G8 530 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 GBP7Q8N8V2 638 aaPredicted RBP12.54□□□□□ -0.4
COMMD3-205ENST00000463688 APCDD1LQ8NCL9 501 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 NUBPLQ8TB37 319 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 SLC22A8Q8TCC7 542 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 NCLNQ969V3 563 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 DTNBP1Q96EV8 351 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 MESP1Q9BRJ9 268 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 FAIM2Q9BWQ8 316 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 ERVK-6Q9BXR3 956 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 OR51B5Q9H339 312 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 MYOTQ9UBF9 498 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 PLEKHB1Q9UF11 243 aaPredicted RBP12.54□□□□□ -0.4
COMMD3-205ENST00000463688 CFL2Q9Y281 166 aa12.54□□□□□ -0.4
COMMD3-205ENST00000463688 NUP210LQ5VU65 1888 aa12.53□□□□□ -0.4
COMMD3-205ENST00000463688 A8MUA0 341 aa12.53□□□□□ -0.4
COMMD3-205ENST00000463688 LRRTM2O43300 516 aa12.53□□□□□ -0.4
COMMD3-205ENST00000463688 NEURL1O76050 574 aa12.53□□□□□ -0.4
COMMD3-205ENST00000463688 UNC5CO95185 931 aa12.53□□□□□ -0.4
COMMD3-205ENST00000463688 B3GALT4O96024 378 aa12.53□□□□□ -0.4
COMMD3-205ENST00000463688 FAM58BPP0C7Q3 252 aa12.53□□□□□ -0.4
COMMD3-205ENST00000463688 NR2F6P10588 404 aa12.53□□□□□ -0.4
COMMD3-205ENST00000463688 ESRRAP11474 423 aaPredicted RBP12.53□□□□□ -0.4
COMMD3-205ENST00000463688 ALOX15P16050 662 aaPredicted RBP12.53□□□□□ -0.4
COMMD3-205ENST00000463688 EFNA3P52797 238 aa12.53□□□□□ -0.4
COMMD3-205ENST00000463688 RPS13P62277 151 aaKnown RBP12.53□□□□□ -0.4
COMMD3-205ENST00000463688 TRA2BP62995 288 aaKnown RBP12.53□□□□□ -0.4
COMMD3-205ENST00000463688 PSPHP78330 225 aa12.53□□□□□ -0.4
COMMD3-205ENST00000463688 RPP38P78345 283 aaKnown RBP12.53□□□□□ -0.4
COMMD3-205ENST00000463688 MPEG1Q2M385 716 aa12.53□□□□□ -0.4
COMMD3-205ENST00000463688 FCRLBQ6BAA4 426 aa12.53□□□□□ -0.4
COMMD3-205ENST00000463688 SPINK14Q6IE38 97 aa12.53□□□□□ -0.4
COMMD3-205ENST00000463688 SLC29A4Q7RTT9 530 aa12.53□□□□□ -0.4
COMMD3-205ENST00000463688 GALNTL5Q7Z4T8 443 aa12.53□□□□□ -0.4
COMMD3-205ENST00000463688 GOLM1Q8NBJ4 401 aa12.53□□□□□ -0.4
COMMD3-205ENST00000463688 GPR137Q96N19 417 aa12.53□□□□□ -0.4
COMMD3-205ENST00000463688 OR8D2Q9GZM6 311 aa12.53□□□□□ -0.4
COMMD3-205ENST00000463688 PCTPQ9UKL6 214 aa12.53□□□□□ -0.4
COMMD3-205ENST00000463688 NTNG1Q9Y2I2 539 aa12.53□□□□□ -0.4
COMMD3-205ENST00000463688 TNRC6AQ8NDV7 1962 aaKnown RBP12.52□□□□□ -0.4
COMMD3-205ENST00000463688 USP9XQ93008 2570 aaPredicted RBP12.52□□□□□ -0.41
COMMD3-205ENST00000463688 GOLGA6L10A6NI86 522 aa12.52□□□□□ -0.41
COMMD3-205ENST00000463688 PLPP1O14494 284 aa12.52□□□□□ -0.41
COMMD3-205ENST00000463688 PRRG2O14669 202 aa12.52□□□□□ -0.41
COMMD3-205ENST00000463688 PROM1O43490 865 aa12.52□□□□□ -0.41
COMMD3-205ENST00000463688 PRAMEF4O60810 478 aa12.52□□□□□ -0.41
COMMD3-205ENST00000463688 CDH16O75309 829 aa12.52□□□□□ -0.41
COMMD3-205ENST00000463688 SEMA7AO75326 666 aa12.52□□□□□ -0.41
COMMD3-205ENST00000463688 LDLRP01130 860 aa12.52□□□□□ -0.41
COMMD3-205ENST00000463688 RHOXF2BP0C7M4 288 aa12.52□□□□□ -0.41
COMMD3-205ENST00000463688 SLC35E2P0CK97 266 aa12.52□□□□□ -0.41
COMMD3-205ENST00000463688 AGAP20933 346 aa12.52□□□□□ -0.41
COMMD3-205ENST00000463688 PIK3R1P27986 724 aa12.52□□□□□ -0.41
COMMD3-205ENST00000463688 ECHS1P30084 290 aa12.52□□□□□ -0.41
COMMD3-205ENST00000463688 DEKP35659 375 aaKnown RBP12.52□□□□□ -0.41
COMMD3-205ENST00000463688 PKNOX1P55347 436 aa12.52□□□□□ -0.41
COMMD3-205ENST00000463688 SNRPNP63162 240 aaKnown RBP12.52□□□□□ -0.41
COMMD3-205ENST00000463688 ASPHQ12797 758 aa12.52□□□□□ -0.41
COMMD3-205ENST00000463688 SLC29A2Q14542 456 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms