RNA–Protein interactions for RNA: ENST00000463183.1

LINC00960-201, long intergenic non-protein coding RNA 960, humanhuman

TSL 1 (best) BASIC

Gene LINC00960, Length 1,333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00960-201ENST00000463183 TRAF3Q13114 568 aa16.76■□□□□ 0.27
LINC00960-201ENST00000463183 METTL2BQ6P1Q9 378 aaKnown RBP16.76■□□□□ 0.27
LINC00960-201ENST00000463183 GFRALQ6UXV0 394 aa16.76■□□□□ 0.27
LINC00960-201ENST00000463183 TIFABQ6ZNK6 161 aa16.76■□□□□ 0.27
LINC00960-201ENST00000463183 GPR180Q86V85 440 aa16.76■□□□□ 0.27
LINC00960-201ENST00000463183 LGI4Q8N135 537 aa16.76■□□□□ 0.27
LINC00960-201ENST00000463183 TMEM132CQ8N3T6 1108 aa16.76■□□□□ 0.27
LINC00960-201ENST00000463183 TMEM156Q8N614 296 aa16.76■□□□□ 0.27
LINC00960-201ENST00000463183 HORMAD2Q8N7B1 307 aa16.76■□□□□ 0.27
LINC00960-201ENST00000463183 WDR20Q8TBZ3 569 aa16.76■□□□□ 0.27
LINC00960-201ENST00000463183 TRPC4APQ8TEL6 797 aa16.76■□□□□ 0.27
LINC00960-201ENST00000463183 ELOVL6Q9H5J4 265 aa16.76■□□□□ 0.27
LINC00960-201ENST00000463183 RPF2Q9H7B2 306 aaKnown RBP16.76■□□□□ 0.27
LINC00960-201ENST00000463183 ZNF223Q9UK11 482 aaPredicted RBP16.76■□□□□ 0.27
LINC00960-201ENST00000463183 ATG4BQ9Y4P1 393 aa16.76■□□□□ 0.27
LINC00960-201ENST00000463183 POLEQ07864 2286 aa16.76■□□□□ 0.27
LINC00960-201ENST00000463183 ICE1Q9Y2F5 2266 aa16.76■□□□□ 0.27
LINC00960-201ENST00000463183 A0A1B0GTL3 188 aa16.75■□□□□ 0.27
LINC00960-201ENST00000463183 GLOD5A6NK44 160 aa16.75■□□□□ 0.27
LINC00960-201ENST00000463183 ITGA10O75578 1167 aa16.75■□□□□ 0.27
LINC00960-201ENST00000463183 SLC25A12O75746 678 aa16.75■□□□□ 0.27
LINC00960-201ENST00000463183 SUPT7LO94864 414 aa16.75■□□□□ 0.27
LINC00960-201ENST00000463183 UNC5CO95185 931 aa16.75■□□□□ 0.27
LINC00960-201ENST00000463183 SHBGP04278 402 aa16.75■□□□□ 0.27
LINC00960-201ENST00000463183 MST1P26927 711 aa16.75■□□□□ 0.27
LINC00960-201ENST00000463183 TLX1P31314 330 aaPredicted RBP16.75■□□□□ 0.27
LINC00960-201ENST00000463183 TNFRSF17Q02223 184 aa16.75■□□□□ 0.27
LINC00960-201ENST00000463183 SERTAD2Q14140 314 aa16.75■□□□□ 0.27
LINC00960-201ENST00000463183 TERF2Q15554 542 aa16.75■□□□□ 0.27
LINC00960-201ENST00000463183 FRG2Q64ET8 278 aa16.75■□□□□ 0.27
LINC00960-201ENST00000463183 SLC25A25Q6KCM7 469 aa16.75■□□□□ 0.27
LINC00960-201ENST00000463183 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.75■□□□□ 0.27
LINC00960-201ENST00000463183 NUDT13Q86X67 352 aa16.75■□□□□ 0.27
LINC00960-201ENST00000463183 ZNF321PQ8N8H1 164 aa16.75■□□□□ 0.27
LINC00960-201ENST00000463183 TMEM178AQ8NBL3 297 aa16.75■□□□□ 0.27
LINC00960-201ENST00000463183 ZNF483Q8TF39 744 aaPredicted RBP16.75■□□□□ 0.27
LINC00960-201ENST00000463183 DAZLQ92904 295 aaKnown RBP16.75■□□□□ 0.27
LINC00960-201ENST00000463183 ANKRD9Q96BM1 317 aaPredicted RBP16.75■□□□□ 0.27
LINC00960-201ENST00000463183 PPWD1Q96BP3 646 aaKnown RBP16.75■□□□□ 0.27
LINC00960-201ENST00000463183 DGAT2Q96PD7 388 aa16.75■□□□□ 0.27
LINC00960-201ENST00000463183 FRG2BQ96QU4 278 aa16.75■□□□□ 0.27
LINC00960-201ENST00000463183 PHF11Q9UIL8 331 aa16.75■□□□□ 0.27
LINC00960-201ENST00000463183 SH3BGRL2Q9UJC5 107 aa16.75■□□□□ 0.27
LINC00960-201ENST00000463183 SLC5A6Q9Y289 635 aa16.75■□□□□ 0.27
LINC00960-201ENST00000463183 WASHC1A8K0Z3 465 aa16.74■□□□□ 0.27
LINC00960-201ENST00000463183 TMPRSS11DO60235 418 aa16.74■□□□□ 0.27
LINC00960-201ENST00000463183 NEURL1O76050 574 aa16.74■□□□□ 0.27
LINC00960-201ENST00000463183 ZFAND5O76080 213 aa16.74■□□□□ 0.27
LINC00960-201ENST00000463183 OTCP00480 354 aa16.74■□□□□ 0.27
LINC00960-201ENST00000463183 SP1P08047 785 aa16.74■□□□□ 0.27
LINC00960-201ENST00000463183 COX7A2P14406 83 aa16.74■□□□□ 0.27
LINC00960-201ENST00000463183 BSGP35613 385 aa16.74■□□□□ 0.27
LINC00960-201ENST00000463183 BUD31P41223 144 aaPredicted RBP16.74■□□□□ 0.27
LINC00960-201ENST00000463183 FOLH1Q04609 750 aa16.74■□□□□ 0.27
LINC00960-201ENST00000463183 HIST2H2BCQ6DN03 193 aa16.74■□□□□ 0.27
LINC00960-201ENST00000463183 ZCCHC7Q8N3Z6 543 aaKnown RBP16.74■□□□□ 0.27
LINC00960-201ENST00000463183 TMEM151AQ8N4L1 468 aa16.74■□□□□ 0.27
LINC00960-201ENST00000463183 OR14A16Q8NHC5 309 aa16.74■□□□□ 0.27
LINC00960-201ENST00000463183 SLC2A12Q8TD20 617 aa16.74■□□□□ 0.27
LINC00960-201ENST00000463183 PTPMT1Q8WUK0 201 aaPredicted RBP16.74■□□□□ 0.27
LINC00960-201ENST00000463183 TMEM125Q96AQ2 219 aa16.74■□□□□ 0.27
LINC00960-201ENST00000463183 HBEGFQ99075 208 aa16.74■□□□□ 0.27
LINC00960-201ENST00000463183 SERPINI1Q99574 410 aa16.74■□□□□ 0.27
LINC00960-201ENST00000463183 NTMT1Q9BV86 223 aa16.74■□□□□ 0.27
LINC00960-201ENST00000463183 MRPL1Q9BYD6 325 aaKnown RBP16.74■□□□□ 0.27
LINC00960-201ENST00000463183 FARSBQ9NSD9 589 aaKnown RBP16.74■□□□□ 0.27
LINC00960-201ENST00000463183 SEC14L3Q9UDX4 400 aa16.74■□□□□ 0.27
LINC00960-201ENST00000463183 VTI1BQ9UEU0 232 aa16.74■□□□□ 0.27
LINC00960-201ENST00000463183 TSC22D4Q9Y3Q8 395 aa16.74■□□□□ 0.27
LINC00960-201ENST00000463183 A0A1W2PPM1 405 aa16.73■□□□□ 0.27
LINC00960-201ENST00000463183 WWP2O00308 870 aa16.73■□□□□ 0.27
LINC00960-201ENST00000463183 FOXE1O00358 373 aaPredicted RBP16.73■□□□□ 0.27
LINC00960-201ENST00000463183 LRRTM2O43300 516 aa16.73■□□□□ 0.27
LINC00960-201ENST00000463183 DLX3O60479 287 aa16.73■□□□□ 0.27
LINC00960-201ENST00000463183 OR4F21O95013 312 aa16.73■□□□□ 0.27
LINC00960-201ENST00000463183 FAM58BPP0C7Q3 252 aa16.73■□□□□ 0.27
LINC00960-201ENST00000463183 NR2F6P10588 404 aa16.73■□□□□ 0.27
LINC00960-201ENST00000463183 KRT15P19012 456 aa16.73■□□□□ 0.27
LINC00960-201ENST00000463183 HLCSP50747 726 aa16.73■□□□□ 0.27
LINC00960-201ENST00000463183 TDGF1P3P51864 188 aa16.73■□□□□ 0.27
LINC00960-201ENST00000463183 ALDH6A1Q02252 535 aaKnown RBP16.73■□□□□ 0.27
LINC00960-201ENST00000463183 CLCQ05315 142 aa16.73■□□□□ 0.27
LINC00960-201ENST00000463183 CUL3Q13618 768 aa16.73■□□□□ 0.27
LINC00960-201ENST00000463183 C1QL3Q5VWW1 255 aa16.73■□□□□ 0.27
LINC00960-201ENST00000463183 ZNF324BQ6AW86 544 aaPredicted RBP16.73■□□□□ 0.27
LINC00960-201ENST00000463183 LETMD1Q6P1Q0 360 aa16.73■□□□□ 0.27
LINC00960-201ENST00000463183 HSDL2Q6YN16 418 aa16.73■□□□□ 0.27
LINC00960-201ENST00000463183 CYP4Z2PQ8N1L4 340 aa16.73■□□□□ 0.27
LINC00960-201ENST00000463183 FAM98AQ8NCA5 519 aaKnown RBP16.73■□□□□ 0.27
LINC00960-201ENST00000463183 DNAJB8Q8NHS0 232 aa16.73■□□□□ 0.27
LINC00960-201ENST00000463183 SELENOMQ8WWX9 145 aa16.73■□□□□ 0.27
LINC00960-201ENST00000463183 UCN3Q969E3 161 aa16.73■□□□□ 0.27
LINC00960-201ENST00000463183 SCMH1Q96GD3 660 aa16.73■□□□□ 0.27
LINC00960-201ENST00000463183 PSMG3-AS1Q96PY0 264 aa16.73■□□□□ 0.27
LINC00960-201ENST00000463183 TMEM237Q96Q45 408 aa16.73■□□□□ 0.27
LINC00960-201ENST00000463183 ZNF717Q9BY31 904 aaPredicted RBP16.73■□□□□ 0.27
LINC00960-201ENST00000463183 LYARQ9NX58 379 aaKnown RBP16.73■□□□□ 0.27
LINC00960-201ENST00000463183 MS4A12Q9NXJ0 267 aa16.73■□□□□ 0.27
LINC00960-201ENST00000463183 SLC12A4Q9UP95 1085 aa16.73■□□□□ 0.27
LINC00960-201ENST00000463183 ERVK-11Q9UQG0 969 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms