RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 ACKR4Q9NPB9 350 aa10.01□□□□□ -0.81
CBX3-205ENST00000462165 SEMA4BQ9NPR2 832 aaPredicted RBP10.01□□□□□ -0.81
CBX3-205ENST00000462165 QPCTLQ9NXS2 382 aa10.01□□□□□ -0.81
CBX3-205ENST00000462165 ZNF629Q9UEG4 869 aaPredicted RBP10.01□□□□□ -0.81
CBX3-205ENST00000462165 DAPP1Q9UN19 280 aa10.01□□□□□ -0.81
CBX3-205ENST00000462165 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.01□□□□□ -0.81
CBX3-205ENST00000462165 FN1P02751 2386 aaKnown RBP10.01□□□□□ -0.81
CBX3-205ENST00000462165 GOSR1O95249 250 aa10□□□□□ -0.81
CBX3-205ENST00000462165 EPPINO95925 133 aa10□□□□□ -0.81
CBX3-205ENST00000462165 TBX6O95947 436 aaPredicted RBP10□□□□□ -0.81
CBX3-205ENST00000462165 HEXAP06865 529 aa10□□□□□ -0.81
CBX3-205ENST00000462165 C1GALT1C1LP0DN25 315 aa10□□□□□ -0.81
CBX3-205ENST00000462165 PGAM1P18669 254 aa10□□□□□ -0.81
CBX3-205ENST00000462165 PIGAP37287 484 aa10□□□□□ -0.81
CBX3-205ENST00000462165 TBL3Q12788 808 aaKnown RBP10□□□□□ -0.81
CBX3-205ENST00000462165 RCN2Q14257 317 aa10□□□□□ -0.81
CBX3-205ENST00000462165 CRYMQ14894 314 aa10□□□□□ -0.81
CBX3-205ENST00000462165 EFTUD2Q15029 972 aaKnown RBP eCLIP10□□□□□ -0.81
CBX3-205ENST00000462165 MPEG1Q2M385 716 aa10□□□□□ -0.81
CBX3-205ENST00000462165 ZNF791Q3KP31 576 aaPredicted RBP10□□□□□ -0.81
CBX3-205ENST00000462165 ADPRMQ3LIE5 342 aa10□□□□□ -0.81
CBX3-205ENST00000462165 PIGGQ5H8A4 983 aa10□□□□□ -0.81
CBX3-205ENST00000462165 FBXW10Q5XX13 1052 aa10□□□□□ -0.81
CBX3-205ENST00000462165 SLC22A10Q63ZE4 541 aa10□□□□□ -0.81
CBX3-205ENST00000462165 TTC27Q6P3X3 843 aa10□□□□□ -0.81
CBX3-205ENST00000462165 CLEC9AQ6UXN8 241 aa10□□□□□ -0.81
CBX3-205ENST00000462165 TMIGD1Q6UXZ0 262 aa10□□□□□ -0.81
CBX3-205ENST00000462165 CHSY3Q70JA7 882 aa10□□□□□ -0.81
CBX3-205ENST00000462165 KRTAP1-3Q8IUG1 177 aa10□□□□□ -0.81
CBX3-205ENST00000462165 LRRC25Q8N386 305 aaPredicted RBP10□□□□□ -0.81
CBX3-205ENST00000462165 NAT8LQ8N9F0 302 aa10□□□□□ -0.81
CBX3-205ENST00000462165 TNIP2Q8NFZ5 429 aa10□□□□□ -0.81
CBX3-205ENST00000462165 OR2L5Q8NG80 312 aa10□□□□□ -0.81
CBX3-205ENST00000462165 NEIL3Q8TAT5 605 aa10□□□□□ -0.81
CBX3-205ENST00000462165 SLC2A12Q8TD20 617 aa10□□□□□ -0.81
CBX3-205ENST00000462165 SREK1Q8WXA9 508 aaKnown RBP10□□□□□ -0.81
CBX3-205ENST00000462165 CSF3RQ99062 836 aa10□□□□□ -0.81
CBX3-205ENST00000462165 ALOXE3Q9BYJ1 711 aa10□□□□□ -0.81
CBX3-205ENST00000462165 NEUROD4Q9HD90 331 aa10□□□□□ -0.81
CBX3-205ENST00000462165 MTRF1LQ9UGC7 380 aaKnown RBP10□□□□□ -0.81
CBX3-205ENST00000462165 IKZF3Q9UKT9 509 aa10□□□□□ -0.81
CBX3-205ENST00000462165 KIAA1549Q9HCM3 1950 aa10□□□□□ -0.81
CBX3-205ENST00000462165 DOCK7Q96N67 2140 aa10□□□□□ -0.81
CBX3-205ENST00000462165 MYOCOSA0A1B0GUC4 107 aa9.99□□□□□ -0.81
CBX3-205ENST00000462165 TUBAL3A6NHL2 446 aa9.99□□□□□ -0.81
CBX3-205ENST00000462165 FAM171A2A8MVW0 826 aa9.99□□□□□ -0.81
CBX3-205ENST00000462165 AHRRA9YTQ3 701 aa9.99□□□□□ -0.81
CBX3-205ENST00000462165 C17orf105B2RV13 164 aa9.99□□□□□ -0.81
CBX3-205ENST00000462165 H2AFYO75367 372 aaKnown RBP9.99□□□□□ -0.81
CBX3-205ENST00000462165 CLEC3AO75596 197 aa9.99□□□□□ -0.81
CBX3-205ENST00000462165 TTC4O95801 387 aa9.99□□□□□ -0.81
CBX3-205ENST00000462165 RFPL3SP0C7P2 107 aa9.99□□□□□ -0.81
CBX3-205ENST00000462165 GNAZP19086 355 aa9.99□□□□□ -0.81
CBX3-205ENST00000462165 TNNI3P19429 210 aa9.99□□□□□ -0.81
CBX3-205ENST00000462165 CERS1P27544 350 aa9.99□□□□□ -0.81
CBX3-205ENST00000462165 HPDP32754 393 aaPredicted RBP9.99□□□□□ -0.81
CBX3-205ENST00000462165 TIMP3P35625 211 aa9.99□□□□□ -0.81
CBX3-205ENST00000462165 PGGT1BP53609 377 aa9.99□□□□□ -0.81
CBX3-205ENST00000462165 PLA2G16P53816 162 aa9.99□□□□□ -0.81
CBX3-205ENST00000462165 MTTPP55157 894 aa9.99□□□□□ -0.81
CBX3-205ENST00000462165 DCAF7P61962 342 aa9.99□□□□□ -0.81
CBX3-205ENST00000462165 CDKL1Q00532 357 aa9.99□□□□□ -0.81
CBX3-205ENST00000462165 STX4Q12846 297 aa9.99□□□□□ -0.81
CBX3-205ENST00000462165 SERTAD2Q14140 314 aa9.99□□□□□ -0.81
CBX3-205ENST00000462165 TMEM198Q66K66 360 aa9.99□□□□□ -0.81
CBX3-205ENST00000462165 TRIM40Q6P9F5 258 aa9.99□□□□□ -0.81
CBX3-205ENST00000462165 ABHD17CQ6PCB6 329 aa9.99□□□□□ -0.81
CBX3-205ENST00000462165 SLCO4C1Q6ZQN7 724 aa9.99□□□□□ -0.81
CBX3-205ENST00000462165 MAATS1Q7Z4T9 603 aa9.99□□□□□ -0.81
CBX3-205ENST00000462165 KIF18BQ86Y91 864 aa9.99□□□□□ -0.81
CBX3-205ENST00000462165 LACC1Q8IV20 430 aa9.99□□□□□ -0.81
CBX3-205ENST00000462165 NUBPLQ8TB37 319 aa9.99□□□□□ -0.81
CBX3-205ENST00000462165 PAQR8Q8TEZ7 354 aa9.99□□□□□ -0.81
CBX3-205ENST00000462165 ZNF721Q8TF20 911 aa9.99□□□□□ -0.81
CBX3-205ENST00000462165 CCT6BQ92526 530 aa9.99□□□□□ -0.81
CBX3-205ENST00000462165 PITHD1Q9GZP4 211 aaPredicted RBP9.99□□□□□ -0.81
CBX3-205ENST00000462165 REXO4Q9GZR2 422 aaKnown RBP9.99□□□□□ -0.81
CBX3-205ENST00000462165 NT5DC2Q9H857 520 aa9.99□□□□□ -0.81
CBX3-205ENST00000462165 PROK2Q9HC23 129 aa9.99□□□□□ -0.81
CBX3-205ENST00000462165 ZFP64Q9NPA5 681 aa9.99□□□□□ -0.81
CBX3-205ENST00000462165 TRMT1Q9NXH9 659 aaKnown RBP9.99□□□□□ -0.81
CBX3-205ENST00000462165 CORO1CQ9ULV4 474 aaPredicted RBP9.99□□□□□ -0.81
CBX3-205ENST00000462165 BOKQ9UMX3 212 aaPredicted RBP9.99□□□□□ -0.81
CBX3-205ENST00000462165 VWA7Q9Y334 891 aa9.99□□□□□ -0.81
CBX3-205ENST00000462165 ANKDD1BA6NHY2 528 aa9.98□□□□□ -0.81
CBX3-205ENST00000462165 LRRC3CA6NJW4 275 aa9.98□□□□□ -0.81
CBX3-205ENST00000462165 KDM4EB2RXH2 506 aaPredicted RBP9.98□□□□□ -0.81
CBX3-205ENST00000462165 LDB3O75112 727 aa9.98□□□□□ -0.81
CBX3-205ENST00000462165 WDR47O94967 919 aa9.98□□□□□ -0.81
CBX3-205ENST00000462165 ETHE1O95571 254 aa9.98□□□□□ -0.81
CBX3-205ENST00000462165 IL2RAP01589 272 aa9.98□□□□□ -0.81
CBX3-205ENST00000462165 CD53P19397 219 aa9.98□□□□□ -0.81
CBX3-205ENST00000462165 HNMTP50135 292 aa9.98□□□□□ -0.81
CBX3-205ENST00000462165 ZNF136P52737 540 aa9.98□□□□□ -0.81
CBX3-205ENST00000462165 KCNJ2P63252 427 aa9.98□□□□□ -0.81
CBX3-205ENST00000462165 SORDQ00796 357 aa9.98□□□□□ -0.81
CBX3-205ENST00000462165 ASPHQ12797 758 aa9.98□□□□□ -0.81
CBX3-205ENST00000462165 SLBPQ14493 270 aaKnown RBP eCLIP9.98□□□□□ -0.81
CBX3-205ENST00000462165 ACSF3Q4G176 576 aaPredicted RBP9.98□□□□□ -0.81
CBX3-205ENST00000462165 SPANXN3Q5MJ09 141 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms