RNA–Protein interactions for RNA: ENST00000461674.5

LRCH3-210, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 537 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-210ENST00000461674 ST3GAL5Q9UNP4 418 aa6.73□□□□□ -1.33
LRCH3-210ENST00000461674 TSC22D4Q9Y3Q8 395 aa6.73□□□□□ -1.33
LRCH3-210ENST00000461674 CFAP65Q6ZU64 1925 aaKnown RBP6.73□□□□□ -1.33
LRCH3-210ENST00000461674 RNF123Q5XPI4 1314 aa6.73□□□□□ -1.33
LRCH3-210ENST00000461674 MED19A0JLT2 244 aaPredicted RBP6.72□□□□□ -1.33
LRCH3-210ENST00000461674 NPEPPSL1A6NEC2 478 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 TMEM191CA6NGB0 347 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 HSBP1L1C9JCN9 74 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 NPIPA2E9PIF3 369 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 ARPC1BO15143 372 aaKnown RBP6.72□□□□□ -1.33
LRCH3-210ENST00000461674 SYT7O43581 403 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 ZIC3O60481 467 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 CDH16O75309 829 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 TMEM191BP0C7N4 346 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 CT45A8P0DMV1 189 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 CT45A9P0DMV2 189 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 MED14OSP0DP75 135 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 GCFC2P16383 781 aaKnown RBP6.72□□□□□ -1.33
LRCH3-210ENST00000461674 AMD1P17707 334 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 NKX2-1P43699 371 aaPredicted RBP6.72□□□□□ -1.33
LRCH3-210ENST00000461674 OR3A3P47888 321 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 MAZP56270 477 aaKnown RBP6.72□□□□□ -1.33
LRCH3-210ENST00000461674 BLOC1S1P78537 153 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 HSF1Q00613 529 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 PDE1BQ01064 536 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 BNC1Q01954 994 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 CTF1Q16619 201 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 ZSWIM7Q19AV6 140 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 ZNF528Q3MIS6 628 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 ZNF385BQ569K4 471 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 CT45A2Q5DJT8 189 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 TCERG1LQ5VWI1 586 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 TMEM225Q6GV28 225 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 CENPUQ71F23 418 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 CPEB2Q7Z5Q1 589 aaKnown RBP6.72□□□□□ -1.33
LRCH3-210ENST00000461674 GRASPQ7Z6J2 395 aaPredicted RBP6.72□□□□□ -1.33
LRCH3-210ENST00000461674 VSTM4Q8IW00 320 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 KATNAL2Q8IYT4 538 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 TMEM99Q8N816 258 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 RNF128Q8TEB7 428 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 SEMA4DQ92854 862 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 MRPL53Q96EL3 112 aaKnown RBP6.72□□□□□ -1.33
LRCH3-210ENST00000461674 TMEM19Q96HH6 336 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 NAF1Q96HR8 494 aaKnown RBP6.72□□□□□ -1.33
LRCH3-210ENST00000461674 FAM84BQ96KN1 310 aaPredicted RBP6.72□□□□□ -1.33
LRCH3-210ENST00000461674 RTP3Q9BQQ7 232 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 RIOK1Q9BRS2 568 aaKnown RBP6.72□□□□□ -1.33
LRCH3-210ENST00000461674 CHRDL1Q9BU40 450 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 RBM24Q9BX46 236 aaKnown RBP6.72□□□□□ -1.33
LRCH3-210ENST00000461674 NUSAP1Q9BXS6 441 aaKnown RBP6.72□□□□□ -1.33
LRCH3-210ENST00000461674 WWP1Q9H0M0 922 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 GLT8D2Q9H1C3 349 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 AAMDCQ9H7C9 122 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 CLK4Q9HAZ1 481 aaKnown RBP6.72□□□□□ -1.33
LRCH3-210ENST00000461674 ACKR4Q9NPB9 350 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 PCMTD2Q9NV79 361 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 WNT16Q9UBV4 365 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 CDH9Q9ULB4 789 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 HS3ST3A1Q9Y663 406 aa6.72□□□□□ -1.33
LRCH3-210ENST00000461674 NINLQ9Y2I6 1382 aa6.71□□□□□ -1.33
LRCH3-210ENST00000461674 LOC105371242A0A075B767 164 aa6.71□□□□□ -1.34
LRCH3-210ENST00000461674 A0A087WUV0 522 aaPredicted RBP6.71□□□□□ -1.34
LRCH3-210ENST00000461674 CENPVL1A0A0U1RR11 272 aa6.71□□□□□ -1.34
LRCH3-210ENST00000461674 GOLGA6L9A6NEM1 432 aa6.71□□□□□ -1.34
LRCH3-210ENST00000461674 ANTXRLA6NF34 631 aa6.71□□□□□ -1.34
LRCH3-210ENST00000461674 SUPT3HB4E1H0 165 aa6.71□□□□□ -1.34
LRCH3-210ENST00000461674 HSPA12AO43301 675 aa6.71□□□□□ -1.34
LRCH3-210ENST00000461674 AKR7A2O43488 359 aa6.71□□□□□ -1.34
LRCH3-210ENST00000461674 NEBLO76041 1014 aa6.71□□□□□ -1.34
LRCH3-210ENST00000461674 NDUFA7O95182 113 aa6.71□□□□□ -1.34
LRCH3-210ENST00000461674 GOT2P00505 430 aaKnown RBP6.71□□□□□ -1.34
LRCH3-210ENST00000461674 EPOP01588 193 aa6.71□□□□□ -1.34
LRCH3-210ENST00000461674 CRYGCP07315 174 aa6.71□□□□□ -1.34
LRCH3-210ENST00000461674 ALPIP09923 528 aa6.71□□□□□ -1.34
LRCH3-210ENST00000461674 HIST1H2AGP0C0S8 130 aaPredicted RBP6.71□□□□□ -1.34
LRCH3-210ENST00000461674 TROVE2P10155 538 aaKnown RBP eCLIP6.71□□□□□ -1.34
LRCH3-210ENST00000461674 ODC1P11926 461 aa6.71□□□□□ -1.34
LRCH3-210ENST00000461674 BMP7P18075 431 aa6.71□□□□□ -1.34
LRCH3-210ENST00000461674 UQCRC2P22695 453 aa6.71□□□□□ -1.34
LRCH3-210ENST00000461674 U2AF2P26368 475 aaKnown RBP eCLIP6.71□□□□□ -1.344e-10■■■■□ 21.6
LRCH3-210ENST00000461674 STX2P32856 288 aa6.71□□□□□ -1.34
LRCH3-210ENST00000461674 STARP49675 285 aa6.71□□□□□ -1.34
LRCH3-210ENST00000461674 VAMP7P51809 220 aa6.71□□□□□ -1.34
LRCH3-210ENST00000461674 ZNF415Q09FC8 603 aa6.71□□□□□ -1.34
LRCH3-210ENST00000461674 ELAVL3Q14576 367 aaKnown RBP6.71□□□□□ -1.34
LRCH3-210ENST00000461674 P2RY14Q15391 338 aa6.71□□□□□ -1.34
LRCH3-210ENST00000461674 EARS2Q5JPH6 523 aaKnown RBP6.71□□□□□ -1.34
LRCH3-210ENST00000461674 NT5DC1Q5TFE4 455 aa6.71□□□□□ -1.34
LRCH3-210ENST00000461674 ANO5Q75V66 913 aa6.71□□□□□ -1.34
LRCH3-210ENST00000461674 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.71□□□□□ -1.34
LRCH3-210ENST00000461674 C1orf210Q8IVY1 113 aa6.71□□□□□ -1.34
LRCH3-210ENST00000461674 CPSF7Q8N684 471 aaKnown RBP6.71□□□□□ -1.34
LRCH3-210ENST00000461674 OR10Q1Q8NGQ4 319 aa6.71□□□□□ -1.34
LRCH3-210ENST00000461674 LIPHQ8WWY8 451 aa6.71□□□□□ -1.34
LRCH3-210ENST00000461674 HIST1H2ACQ93077 130 aa6.71□□□□□ -1.34
LRCH3-210ENST00000461674 HAVCR1Q96D42 359 aa6.71□□□□□ -1.34
LRCH3-210ENST00000461674 REPS1Q96D71 796 aa6.71□□□□□ -1.34
LRCH3-210ENST00000461674 HPDLQ96IR7 371 aa6.71□□□□□ -1.34
LRCH3-210ENST00000461674 GFM1Q96RP9 751 aaKnown RBP6.71□□□□□ -1.34
LRCH3-210ENST00000461674 NDNQ99608 321 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms