RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 LMNTD2Q8IXW0 634 aa12.66□□□□□ -0.38
PABPC4-208ENST00000461578 AGGF1Q8N302 714 aaeCLIP12.66□□□□□ -0.38
PABPC4-208ENST00000461578 MORN4Q8NDC4 146 aa12.66□□□□□ -0.38
PABPC4-208ENST00000461578 OR5L2Q8NGL0 311 aa12.66□□□□□ -0.38
PABPC4-208ENST00000461578 OR14A16Q8NHC5 309 aa12.66□□□□□ -0.38
PABPC4-208ENST00000461578 SPATA3Q8NHX4 192 aa12.66□□□□□ -0.38
PABPC4-208ENST00000461578 SLC2A12Q8TD20 617 aa12.66□□□□□ -0.38
PABPC4-208ENST00000461578 MS4A6EQ96DS6 147 aa12.66□□□□□ -0.38
PABPC4-208ENST00000461578 COX4I2Q96KJ9 171 aa12.66□□□□□ -0.38
PABPC4-208ENST00000461578 FAM167BQ9BTA0 163 aa12.66□□□□□ -0.38
PABPC4-208ENST00000461578 NPLQ9BXD5 320 aaPredicted RBP12.66□□□□□ -0.38
PABPC4-208ENST00000461578 ZNF629Q9UEG4 869 aaPredicted RBP12.66□□□□□ -0.38
PABPC4-208ENST00000461578 BOKQ9UMX3 212 aaPredicted RBP12.66□□□□□ -0.38
PABPC4-208ENST00000461578 SLC22A14Q9Y267 594 aa12.66□□□□□ -0.38
PABPC4-208ENST00000461578 FREM3P0C091 2139 aa12.65□□□□□ -0.38
PABPC4-208ENST00000461578 LRRC3CA6NJW4 275 aa12.65□□□□□ -0.38
PABPC4-208ENST00000461578 INAFM1C9JVW0 142 aa12.65□□□□□ -0.38
PABPC4-208ENST00000461578 CYR61O00622 381 aa12.65□□□□□ -0.38
PABPC4-208ENST00000461578 ARHGEF9O43307 516 aa12.65□□□□□ -0.38
PABPC4-208ENST00000461578 LDB3O75112 727 aa12.65□□□□□ -0.38
PABPC4-208ENST00000461578 EPPINO95925 133 aa12.65□□□□□ -0.38
PABPC4-208ENST00000461578 FGGP02679 453 aa12.65□□□□□ -0.38
PABPC4-208ENST00000461578 HRGP04196 525 aa12.65□□□□□ -0.38
PABPC4-208ENST00000461578 LIM2P55344 173 aa12.65□□□□□ -0.38
PABPC4-208ENST00000461578 IL2P60568 153 aa12.65□□□□□ -0.38
PABPC4-208ENST00000461578 PDAP1Q13442 181 aaKnown RBP12.65□□□□□ -0.38
PABPC4-208ENST00000461578 ARMC3Q5W041 872 aa12.65□□□□□ -0.38
PABPC4-208ENST00000461578 ADGRD1Q6QNK2 874 aa12.65□□□□□ -0.38
PABPC4-208ENST00000461578 CXorf67Q86X51 503 aaPredicted RBP12.65□□□□□ -0.38
PABPC4-208ENST00000461578 TXLNBQ8N3L3 684 aa12.65□□□□□ -0.38
PABPC4-208ENST00000461578 C2CD4AQ8NCU7 369 aaPredicted RBP12.65□□□□□ -0.38
PABPC4-208ENST00000461578 Q96MF0 132 aa12.65□□□□□ -0.38
PABPC4-208ENST00000461578 SERPINB12Q96P63 405 aa12.65□□□□□ -0.38
PABPC4-208ENST00000461578 QRFPRQ96P65 431 aa12.65□□□□□ -0.38
PABPC4-208ENST00000461578 BAG1Q99933 345 aaPredicted RBP12.65□□□□□ -0.38
PABPC4-208ENST00000461578 ZFP64Q9NPA5 681 aa12.65□□□□□ -0.38
PABPC4-208ENST00000461578 VTI1BQ9UEU0 232 aa12.65□□□□□ -0.38
PABPC4-208ENST00000461578 IKZF3Q9UKT9 509 aa12.65□□□□□ -0.38
PABPC4-208ENST00000461578 PCDHGB3Q9Y5G1 929 aa12.65□□□□□ -0.38
PABPC4-208ENST00000461578 A0A088AWK7 358 aa12.64□□□□□ -0.39
PABPC4-208ENST00000461578 LRIT2A6NDA9 550 aa12.64□□□□□ -0.39
PABPC4-208ENST00000461578 AHRRA9YTQ3 701 aa12.64□□□□□ -0.39
PABPC4-208ENST00000461578 CTNSO60931 367 aa12.64□□□□□ -0.39
PABPC4-208ENST00000461578 ETHE1O95571 254 aa12.64□□□□□ -0.39
PABPC4-208ENST00000461578 ZNF10P21506 573 aaPredicted RBP12.64□□□□□ -0.39
PABPC4-208ENST00000461578 GDF1P27539 372 aa12.64□□□□□ -0.39
PABPC4-208ENST00000461578 GABRB3P28472 473 aa12.64□□□□□ -0.39
PABPC4-208ENST00000461578 TIMP3P35625 211 aa12.64□□□□□ -0.39
PABPC4-208ENST00000461578 MAGEA6P43360 314 aa12.64□□□□□ -0.39
PABPC4-208ENST00000461578 PPP2R2BQ00005 443 aa12.64□□□□□ -0.39
PABPC4-208ENST00000461578 DUSP8Q13202 625 aa12.64□□□□□ -0.39
PABPC4-208ENST00000461578 SLBPQ14493 270 aaKnown RBP eCLIP12.64□□□□□ -0.39
PABPC4-208ENST00000461578 ZNF791Q3KP31 576 aaPredicted RBP12.64□□□□□ -0.39
PABPC4-208ENST00000461578 BBS9Q3SYG4 887 aa12.64□□□□□ -0.39
PABPC4-208ENST00000461578 PIGGQ5H8A4 983 aa12.64□□□□□ -0.39
PABPC4-208ENST00000461578 LACC1Q8IV20 430 aa12.64□□□□□ -0.39
PABPC4-208ENST00000461578 LRRC25Q8N386 305 aaPredicted RBP12.64□□□□□ -0.39
PABPC4-208ENST00000461578 FAM13CQ8NE31 585 aa12.64□□□□□ -0.39
PABPC4-208ENST00000461578 OR8K3Q8NH51 312 aa12.64□□□□□ -0.39
PABPC4-208ENST00000461578 ZNF721Q8TF20 911 aa12.64□□□□□ -0.39
PABPC4-208ENST00000461578 ZNF592Q92610 1267 aa12.64□□□□□ -0.39
PABPC4-208ENST00000461578 HSPBAP1Q96EW2 488 aa12.64□□□□□ -0.39
PABPC4-208ENST00000461578 TRIB1Q96RU8 372 aa12.64□□□□□ -0.39
PABPC4-208ENST00000461578 WDR83Q9BRX9 315 aaKnown RBP12.64□□□□□ -0.39
PABPC4-208ENST00000461578 COPS7BQ9H9Q2 264 aaPredicted RBP12.64□□□□□ -0.39
PABPC4-208ENST00000461578 ACKR4Q9NPB9 350 aa12.64□□□□□ -0.39
PABPC4-208ENST00000461578 COPS7AQ9UBW8 275 aa12.64□□□□□ -0.39
PABPC4-208ENST00000461578 GUCA1BQ9UMX6 200 aa12.64□□□□□ -0.39
PABPC4-208ENST00000461578 DAPP1Q9UN19 280 aa12.64□□□□□ -0.39
PABPC4-208ENST00000461578 CAMK2AQ9UQM7 478 aa12.64□□□□□ -0.39
PABPC4-208ENST00000461578 KCNE2Q9Y6J6 123 aa12.64□□□□□ -0.39
PABPC4-208ENST00000461578 NINQ8N4C6 2090 aa12.64□□□□□ -0.39
PABPC4-208ENST00000461578 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.63□□□□□ -0.39
PABPC4-208ENST00000461578 SMPD2O60906 423 aa12.63□□□□□ -0.39
PABPC4-208ENST00000461578 KRT14P02533 472 aa12.63□□□□□ -0.39
PABPC4-208ENST00000461578 MLNP12872 115 aa12.63□□□□□ -0.39
PABPC4-208ENST00000461578 SORDQ00796 357 aa12.63□□□□□ -0.39
PABPC4-208ENST00000461578 CRYZQ08257 329 aaKnown RBP12.63□□□□□ -0.39
PABPC4-208ENST00000461578 MPEG1Q2M385 716 aa12.63□□□□□ -0.39
PABPC4-208ENST00000461578 TRIM40Q6P9F5 258 aa12.63□□□□□ -0.39
PABPC4-208ENST00000461578 TMIGD1Q6UXZ0 262 aa12.63□□□□□ -0.39
PABPC4-208ENST00000461578 TMEM139Q8IV31 216 aa12.63□□□□□ -0.39
PABPC4-208ENST00000461578 C9orf40Q8IXQ3 194 aa12.63□□□□□ -0.39
PABPC4-208ENST00000461578 GPATCH11Q8N954 259 aa12.63□□□□□ -0.39
PABPC4-208ENST00000461578 SLC22A8Q8TCC7 542 aa12.63□□□□□ -0.39
PABPC4-208ENST00000461578 DOK4Q8TEW6 326 aa12.63□□□□□ -0.39
PABPC4-208ENST00000461578 PAQR8Q8TEZ7 354 aa12.63□□□□□ -0.39
PABPC4-208ENST00000461578 SPACA9Q96E40 222 aaPredicted RBP12.63□□□□□ -0.39
PABPC4-208ENST00000461578 SERINC2Q96SA4 455 aa12.63□□□□□ -0.39
PABPC4-208ENST00000461578 TIMP4Q99727 224 aa12.63□□□□□ -0.39
PABPC4-208ENST00000461578 REXO4Q9GZR2 422 aaKnown RBP12.63□□□□□ -0.39
PABPC4-208ENST00000461578 PROK2Q9HC23 129 aa12.63□□□□□ -0.39
PABPC4-208ENST00000461578 XAB2Q9HCS7 855 aaKnown RBP12.63□□□□□ -0.39
PABPC4-208ENST00000461578 SH2D2AQ9NP31 389 aa12.63□□□□□ -0.39
PABPC4-208ENST00000461578 SLC17A6Q9P2U8 582 aa12.63□□□□□ -0.39
PABPC4-208ENST00000461578 ADAM21Q9UKJ8 722 aa12.63□□□□□ -0.39
PABPC4-208ENST00000461578 ZKSCAN5Q9Y2L8 839 aa12.63□□□□□ -0.39
PABPC4-208ENST00000461578 SYNDIG1LA6NDD5 238 aa12.62□□□□□ -0.39
PABPC4-208ENST00000461578 TRIM64A6NGJ6 449 aa12.62□□□□□ -0.39
PABPC4-208ENST00000461578 TRIM64BA6NI03 449 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms