RNA–Protein interactions for RNA: ENST00000460620.5

PTPN22-203, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-203ENST00000460620 BCCIPQ9P287 314 aaKnown RBP eCLIP1.26□□□□□ -2.21
PTPN22-203ENST00000460620 SH3GLB1Q9Y371 365 aa1.26□□□□□ -2.21
PTPN22-203ENST00000460620 PCDHGA1Q9Y5H4 931 aa1.26□□□□□ -2.21
PTPN22-203ENST00000460620 PANO1I0J062 215 aa1.25□□□□□ -2.21
PTPN22-203ENST00000460620 CCSO14618 274 aa1.25□□□□□ -2.21
PTPN22-203ENST00000460620 PGLSO95336 258 aa1.25□□□□□ -2.21
PTPN22-203ENST00000460620 IGHG3P01860 377 aa1.25□□□□□ -2.21
PTPN22-203ENST00000460620 FCGR3AP08637 254 aa1.25□□□□□ -2.21
PTPN22-203ENST00000460620 HSD17B1P14061 328 aa1.25□□□□□ -2.21
PTPN22-203ENST00000460620 ACKR3P25106 362 aa1.25□□□□□ -2.21
PTPN22-203ENST00000460620 P2RY4P51582 365 aa1.25□□□□□ -2.21
PTPN22-203ENST00000460620 RIPPLY3P57055 190 aa1.25□□□□□ -2.21
PTPN22-203ENST00000460620 SIM2Q14190 667 aaPredicted RBP1.25□□□□□ -2.21
PTPN22-203ENST00000460620 C6orf136Q5SQH8 315 aa1.25□□□□□ -2.21
PTPN22-203ENST00000460620 ZNF776Q68DI1 518 aaPredicted RBP1.25□□□□□ -2.21
PTPN22-203ENST00000460620 ZNF770Q6IQ21 691 aaPredicted RBP1.25□□□□□ -2.21
PTPN22-203ENST00000460620 FAM219AQ8IW50 185 aa1.25□□□□□ -2.21
PTPN22-203ENST00000460620 ZNF491Q8N8L2 437 aa1.25□□□□□ -2.21
PTPN22-203ENST00000460620 RNF149Q8NC42 400 aa1.25□□□□□ -2.21
PTPN22-203ENST00000460620 MTIF3Q9H2K0 278 aaKnown RBP1.25□□□□□ -2.21
PTPN22-203ENST00000460620 ELL3Q9HB65 397 aaPredicted RBP1.25□□□□□ -2.21
PTPN22-203ENST00000460620 ZNF446Q9NWS9 450 aa1.25□□□□□ -2.21
PTPN22-203ENST00000460620 ZNF319Q9P2F9 582 aa1.25□□□□□ -2.21
PTPN22-203ENST00000460620 KLHL21Q9UJP4 597 aa1.25□□□□□ -2.21
PTPN22-203ENST00000460620 NOCTQ9UK39 431 aaKnown RBP1.25□□□□□ -2.21
PTPN22-203ENST00000460620 EXOC6BQ9Y2D4 811 aa1.25□□□□□ -2.21
PTPN22-203ENST00000460620 LIPGQ9Y5X9 500 aa1.25□□□□□ -2.21
PTPN22-203ENST00000460620 ARID1AO14497 2285 aa1.25□□□□□ -2.21
PTPN22-203ENST00000460620 TRIM49D1C9J1S8 452 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 LATO43561 262 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 CLN5O75503 358 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 GRAP2O75791 330 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 LYNP07948 512 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 SNRPCP09234 159 aaKnown RBP1.24□□□□□ -2.21
PTPN22-203ENST00000460620 CCDC159P0C7I6 412 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 DLATP10515 647 aaKnown RBP1.24□□□□□ -2.21
PTPN22-203ENST00000460620 RPS2P15880 293 aaKnown RBP1.24□□□□□ -2.21
PTPN22-203ENST00000460620 PAX3P23760 479 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 SRD5A2P31213 254 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 HMGCLP35914 325 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 AIMP1Q12904 312 aaKnown RBP1.24□□□□□ -2.21
PTPN22-203ENST00000460620 ANKRD55Q3KP44 614 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 IQCCQ4KMZ1 466 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 LBHQ53QV2 105 aaPredicted RBP1.24□□□□□ -2.21
PTPN22-203ENST00000460620 ALKBH5Q6P6C2 394 aaKnown RBP1.24□□□□□ -2.21
PTPN22-203ENST00000460620 ZNF730Q6ZMV8 503 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 MEX3DQ86XN8 651 aaKnown RBP1.24□□□□□ -2.21
PTPN22-203ENST00000460620 CACUL1Q86Y37 369 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 OR5M11Q96RB7 305 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 PRMT1Q99873 361 aaKnown RBP1.24□□□□□ -2.21
PTPN22-203ENST00000460620 TTYH2Q9BSA4 534 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 CHMP4AQ9BY43 222 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 WDR35Q9P2L0 1181 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 MLXQ9UH92 298 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 ARHGAP23Q9P227 1491 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 MEGF6O75095 1541 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 IGHV3OR16-12A0A075B7B8 117 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 PDXKO00764 312 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 MAGEB4O15481 346 aaPredicted RBP1.24□□□□□ -2.21
PTPN22-203ENST00000460620 PPIP5K2O43314 1243 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 FCGR3BO75015 233 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 DUSP14O95147 198 aaKnown RBP1.24□□□□□ -2.21
PTPN22-203ENST00000460620 OR6A2O95222 327 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 GJB5O95377 273 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 CPN1P15169 458 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 IL11P20809 199 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 CALD1Q05682 793 aaKnown RBP1.24□□□□□ -2.21
PTPN22-203ENST00000460620 SLC17A1Q14916 467 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 MICAQ29983 383 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 PAN3Q58A45 887 aaKnown RBP1.24□□□□□ -2.21
PTPN22-203ENST00000460620 OTPQ5XKR4 325 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 PPP1R21Q6ZMI0 780 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 MKXQ8IYA7 352 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 GVQW1Q8N7I0 195 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 OR13F1Q8NGS4 319 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 TCP11Q8WWU5 503 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 ZNF274Q96GC6 653 aaPredicted RBP1.24□□□□□ -2.21
PTPN22-203ENST00000460620 CASD1Q96PB1 797 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 SCRT1Q9BWW7 348 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 IKZF5Q9H5V7 419 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 ISG20L2Q9H9L3 353 aaKnown RBP1.24□□□□□ -2.21
PTPN22-203ENST00000460620 CYTL1Q9NRR1 136 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 KLRF1Q9NZS2 232 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 RCOR3Q9P2K3 495 aaPredicted RBP1.24□□□□□ -2.21
PTPN22-203ENST00000460620 CIDEBQ9UHD4 219 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 RAB26Q9ULW5 256 aa1.24□□□□□ -2.21
PTPN22-203ENST00000460620 CFAP65Q6ZU64 1925 aaKnown RBP1.23□□□□□ -2.21
PTPN22-203ENST00000460620 A0A087WV48 116 aa1.23□□□□□ -2.21
PTPN22-203ENST00000460620 B4GAT1O43505 415 aa1.23□□□□□ -2.21
PTPN22-203ENST00000460620 ZNF861PO60384 105 aa1.23□□□□□ -2.21
PTPN22-203ENST00000460620 CSDE1O75534 798 aaKnown RBP1.23□□□□□ -2.21
PTPN22-203ENST00000460620 MMP10P09238 476 aa1.23□□□□□ -2.21
PTPN22-203ENST00000460620 ID1P41134 155 aa1.23□□□□□ -2.21
PTPN22-203ENST00000460620 ABRQ12979 859 aa1.23□□□□□ -2.21
PTPN22-203ENST00000460620 PSG7Q13046 419 aa1.23□□□□□ -2.21
PTPN22-203ENST00000460620 EMC2Q15006 297 aa1.23□□□□□ -2.21
PTPN22-203ENST00000460620 CDO1Q16878 200 aa1.23□□□□□ -2.21
PTPN22-203ENST00000460620 HYAL4Q2M3T9 481 aa1.23□□□□□ -2.21
PTPN22-203ENST00000460620 ZNF658Q5TYW1 1059 aaPredicted RBP1.23□□□□□ -2.21
PTPN22-203ENST00000460620 TXNRD3NBQ6F5E7 133 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms