RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 SLX4IPQ5VYV7 408 aa8.43□□□□□ -1.06
HDAC3-202ENST00000459727 PLAG1Q6DJT9 500 aa8.43□□□□□ -1.06
HDAC3-202ENST00000459727 FRMPD2BQ6IN97 320 aa8.43□□□□□ -1.06
HDAC3-202ENST00000459727 CASP12Q6UXS9 341 aa8.43□□□□□ -1.06
HDAC3-202ENST00000459727 CD300LDQ6UXZ3 194 aa8.43□□□□□ -1.06
HDAC3-202ENST00000459727 PTCHD4Q6ZW05 846 aa8.43□□□□□ -1.06
HDAC3-202ENST00000459727 GALNT10Q86SR1 603 aa8.43□□□□□ -1.06
HDAC3-202ENST00000459727 ETFBKMTQ8IXQ9 262 aa8.43□□□□□ -1.06
HDAC3-202ENST00000459727 SRFBP1Q8NEF9 429 aaKnown RBP8.43□□□□□ -1.06
HDAC3-202ENST00000459727 ST13P5Q8NFI4 369 aaPredicted RBP8.43□□□□□ -1.06
HDAC3-202ENST00000459727 TET1Q8NFU7 2136 aa8.43□□□□□ -1.06
HDAC3-202ENST00000459727 OR8J1Q8NGP2 316 aa8.43□□□□□ -1.06
HDAC3-202ENST00000459727 OR5K2Q8NHB8 316 aa8.43□□□□□ -1.06
HDAC3-202ENST00000459727 SETD6Q8TBK2 473 aa8.43□□□□□ -1.06
HDAC3-202ENST00000459727 SFXN5Q8TD22 340 aa8.43□□□□□ -1.06
HDAC3-202ENST00000459727 KLHL6Q8WZ60 621 aa8.43□□□□□ -1.06
HDAC3-202ENST00000459727 TFGQ92734 400 aaPredicted RBP8.43□□□□□ -1.06
HDAC3-202ENST00000459727 EFHD2Q96C19 240 aaPredicted RBP8.43□□□□□ -1.06
HDAC3-202ENST00000459727 TCEAL4Q96EI5 215 aa8.43□□□□□ -1.06
HDAC3-202ENST00000459727 COX14Q96I36 57 aa8.43□□□□□ -1.06
HDAC3-202ENST00000459727 ZNF354BQ96LW1 612 aa8.43□□□□□ -1.06
HDAC3-202ENST00000459727 CAMK1GQ96NX5 476 aa8.43□□□□□ -1.06
HDAC3-202ENST00000459727 TRNT1Q96Q11 434 aaKnown RBP8.43□□□□□ -1.06
HDAC3-202ENST00000459727 MND1Q9BWT6 205 aa8.43□□□□□ -1.06
HDAC3-202ENST00000459727 BTBD2Q9BX70 525 aa8.43□□□□□ -1.06
HDAC3-202ENST00000459727 ZDHHC5Q9C0B5 715 aa8.43□□□□□ -1.06
HDAC3-202ENST00000459727 SLC6A16Q9GZN6 736 aa8.43□□□□□ -1.06
HDAC3-202ENST00000459727 OR51B5Q9H339 312 aa8.43□□□□□ -1.06
HDAC3-202ENST00000459727 RMI1Q9H9A7 625 aa8.43□□□□□ -1.06
HDAC3-202ENST00000459727 ACER3Q9NUN7 267 aa8.43□□□□□ -1.06
HDAC3-202ENST00000459727 GPATCH2Q9NW75 528 aa8.43□□□□□ -1.06
HDAC3-202ENST00000459727 HCFC1R1Q9NWW0 138 aa8.43□□□□□ -1.06
HDAC3-202ENST00000459727 CALML5Q9NZT1 146 aa8.43□□□□□ -1.06
HDAC3-202ENST00000459727 SCHIP1Q9P0W5 487 aaPredicted RBP8.43□□□□□ -1.06
HDAC3-202ENST00000459727 FTSJ1Q9UET6 329 aa8.43□□□□□ -1.06
HDAC3-202ENST00000459727 KLHL3Q9UH77 587 aa8.43□□□□□ -1.06
HDAC3-202ENST00000459727 MRPS23Q9Y3D9 190 aaKnown RBP8.43□□□□□ -1.06
HDAC3-202ENST00000459727 MAP4K5Q9Y4K4 846 aa8.43□□□□□ -1.06
HDAC3-202ENST00000459727 PCDHGA3Q9Y5H0 932 aa8.43□□□□□ -1.06
HDAC3-202ENST00000459727 DSPPQ9NZW4 1301 aa8.43□□□□□ -1.06
HDAC3-202ENST00000459727 A0A1W2PRQ8 180 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 PDZK1P1A8MUH7 402 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 TLR4O00206 839 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 NDUFS4O43181 175 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 UGT2B17O75795 530 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 FGBP02675 491 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 LINC00271P0C7V0 271 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 ENDOUP21128 410 aaKnown RBP8.42□□□□□ -1.06
HDAC3-202ENST00000459727 CD72P21854 359 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 TPP2P29144 1249 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-202ENST00000459727 CTNNB1P35222 781 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 CRISP3P54108 245 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 ABATP80404 500 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 TGM3Q08188 693 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 NCF4Q15080 339 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 PTGES3Q15185 160 aaKnown RBP8.42□□□□□ -1.06
HDAC3-202ENST00000459727 OCLNQ16625 522 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 TPRG1LQ5T0D9 272 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 ZNF648Q5T619 568 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-202ENST00000459727 C9orf64Q5T6V5 341 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 PSRC1Q6PGN9 363 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-202ENST00000459727 C19orf48Q6RUI8 117 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-202ENST00000459727 OTOP2Q7RTS6 562 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 TSEN54Q7Z6J9 526 aaKnown RBP8.42□□□□□ -1.06
HDAC3-202ENST00000459727 NAT16Q8N8M0 369 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 TOR1AIP2Q8NFQ8 470 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 VN1R2Q8NFZ6 395 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 WDR48Q8TAF3 677 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 PHOSPHO2Q8TCD6 241 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 CHAC2Q8WUX2 184 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 SUSD6Q92537 303 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 CIDECQ96AQ7 238 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-202ENST00000459727 TMCO6Q96DC7 493 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 CEP19Q96LK0 163 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 NEURL2Q9BR09 285 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 C1QTNF7Q9BXJ2 289 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 MTIF3Q9H2K0 278 aaKnown RBP8.42□□□□□ -1.06
HDAC3-202ENST00000459727 LINC00597Q9H2U6 94 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 ANKRD19PQ9H560 264 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 DDX31Q9H8H2 851 aaKnown RBP8.42□□□□□ -1.06
HDAC3-202ENST00000459727 CACYBPQ9HB71 228 aaKnown RBP8.42□□□□□ -1.06
HDAC3-202ENST00000459727 BCL2L10Q9HD36 194 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 FZD3Q9NPG1 666 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 GIMAP4Q9NUV9 329 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 MS4A12Q9NXJ0 267 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 ZNF226Q9NYT6 803 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 NPAP1Q9NZP6 1156 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 TAAR2Q9P1P5 351 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 SEC14L3Q9UDX4 400 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 PRKAG2Q9UGJ0 569 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 ZNF229Q9UJW7 825 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 ACAD8Q9UKU7 415 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.42□□□□□ -1.06
HDAC3-202ENST00000459727 ERVK-11Q9UQG0 969 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-202ENST00000459727 IFT52Q9Y366 437 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 SNX8Q9Y5X2 465 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 LAMA3Q16787 3333 aa8.42□□□□□ -1.06
HDAC3-202ENST00000459727 PIKFYVEQ9Y2I7 2098 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms