RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 SIX3O95343 332 aaPredicted RBP12.06□□□□□ -0.48
TREX1-203ENST00000456089 CERS1P27544 350 aa12.06□□□□□ -0.48
TREX1-203ENST00000456089 PIK3CBP42338 1070 aa12.06□□□□□ -0.48
TREX1-203ENST00000456089 SSR2P43308 183 aa12.06□□□□□ -0.48
TREX1-203ENST00000456089 CASP6P55212 293 aa12.06□□□□□ -0.48
TREX1-203ENST00000456089 MLF1P58340 268 aa12.06□□□□□ -0.48
TREX1-203ENST00000456089 PCDH1Q08174 1060 aa12.06□□□□□ -0.48
TREX1-203ENST00000456089 CPSF6Q16630 551 aaKnown RBP eCLIP12.06□□□□□ -0.48
TREX1-203ENST00000456089 ADPRMQ3LIE5 342 aa12.06□□□□□ -0.48
TREX1-203ENST00000456089 BNC2Q6ZN30 1099 aaPredicted RBP12.06□□□□□ -0.48
TREX1-203ENST00000456089 TIFABQ6ZNK6 161 aa12.06□□□□□ -0.48
TREX1-203ENST00000456089 C16orf47Q6ZP98 133 aaPredicted RBP12.06□□□□□ -0.48
TREX1-203ENST00000456089 VN1R5Q7Z5H4 357 aa12.06□□□□□ -0.48
TREX1-203ENST00000456089 CLNKQ7Z7G1 428 aa12.06□□□□□ -0.48
TREX1-203ENST00000456089 LCA5Q86VQ0 697 aa12.06□□□□□ -0.48
TREX1-203ENST00000456089 SPPL2CQ8IUH8 684 aa12.06□□□□□ -0.48
TREX1-203ENST00000456089 ZNF595Q8IYB9 648 aa12.06□□□□□ -0.48
TREX1-203ENST00000456089 FAM47BQ8NA70 645 aa12.06□□□□□ -0.48
TREX1-203ENST00000456089 HUS1BQ8NHY5 278 aa12.06□□□□□ -0.48
TREX1-203ENST00000456089 ZNF473Q8WTR7 871 aaKnown RBP12.06□□□□□ -0.48
TREX1-203ENST00000456089 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.06□□□□□ -0.48
TREX1-203ENST00000456089 RGMAQ96B86 450 aa12.06□□□□□ -0.48
TREX1-203ENST00000456089 MS4A8Q9BY19 250 aa12.06□□□□□ -0.48
TREX1-203ENST00000456089 NOL11Q9H8H0 719 aaKnown RBP12.06□□□□□ -0.48
TREX1-203ENST00000456089 LIN28AQ9H9Z2 209 aaKnown RBP12.06□□□□□ -0.48
TREX1-203ENST00000456089 FETUBQ9UGM5 382 aa12.06□□□□□ -0.48
TREX1-203ENST00000456089 ZNF835Q9Y2P0 537 aa12.06□□□□□ -0.48
TREX1-203ENST00000456089 PCDHGB6Q9Y5F9 930 aa12.06□□□□□ -0.48
TREX1-203ENST00000456089 TRBV11-1A0A0K0K1C0 115 aa12.05□□□□□ -0.48
TREX1-203ENST00000456089 SYNDIG1LA6NDD5 238 aa12.05□□□□□ -0.48
TREX1-203ENST00000456089 LRRC14BA6NHZ5 514 aa12.05□□□□□ -0.48
TREX1-203ENST00000456089 SAP18O00422 153 aaKnown RBP12.05□□□□□ -0.48
TREX1-203ENST00000456089 ASNA1O43681 348 aa12.05□□□□□ -0.48
TREX1-203ENST00000456089 PRKNO60260 465 aaPredicted RBP12.05□□□□□ -0.48
TREX1-203ENST00000456089 NME2P1O60361 137 aa12.05□□□□□ -0.48
TREX1-203ENST00000456089 ABOP16442 354 aa12.05□□□□□ -0.48
TREX1-203ENST00000456089 NME2P22392 152 aa12.05□□□□□ -0.48
TREX1-203ENST00000456089 PTX3P26022 381 aaPredicted RBP12.05□□□□□ -0.48
TREX1-203ENST00000456089 PTGER1P34995 402 aa12.05□□□□□ -0.48
TREX1-203ENST00000456089 CYB561P49447 251 aa12.05□□□□□ -0.48
TREX1-203ENST00000456089 NR0B1P51843 470 aaKnown RBP12.05□□□□□ -0.48
TREX1-203ENST00000456089 LIM2P55344 173 aa12.05□□□□□ -0.48
TREX1-203ENST00000456089 HSD17B7P56937 341 aa12.05□□□□□ -0.48
TREX1-203ENST00000456089 STX4Q12846 297 aa12.05□□□□□ -0.48
TREX1-203ENST00000456089 E2F2Q14209 437 aa12.05□□□□□ -0.48
TREX1-203ENST00000456089 ZNF630Q2M218 657 aaPredicted RBP12.05□□□□□ -0.48
TREX1-203ENST00000456089 KHDRBS2Q5VWX1 349 aaKnown RBP12.05□□□□□ -0.48
TREX1-203ENST00000456089 FGD2Q7Z6J4 655 aa12.05□□□□□ -0.48
TREX1-203ENST00000456089 CHERPQ8IWX8 916 aaKnown RBP12.05□□□□□ -0.48
TREX1-203ENST00000456089 ACMSDQ8TDX5 336 aa12.05□□□□□ -0.48
TREX1-203ENST00000456089 AGAP11Q8TF27 550 aa12.05□□□□□ -0.48
TREX1-203ENST00000456089 QRFPRQ96P65 431 aa12.05□□□□□ -0.48
TREX1-203ENST00000456089 PHF12Q96QT6 1004 aa12.05□□□□□ -0.48
TREX1-203ENST00000456089 MTERF1Q99551 399 aaKnown RBP12.05□□□□□ -0.48
TREX1-203ENST00000456089 DEFB126Q9BYW3 111 aa12.05□□□□□ -0.48
TREX1-203ENST00000456089 TXLNGYQ9BZA5 131 aa12.05□□□□□ -0.48
TREX1-203ENST00000456089 OR51B5Q9H339 312 aa12.05□□□□□ -0.48
TREX1-203ENST00000456089 LYRM4Q9HD34 91 aa12.05□□□□□ -0.48
TREX1-203ENST00000456089 ZNF223Q9UK11 482 aaPredicted RBP12.05□□□□□ -0.48
TREX1-203ENST00000456089 FBXW2Q9UKT8 454 aa12.05□□□□□ -0.48
TREX1-203ENST00000456089 DAPP1Q9UN19 280 aa12.05□□□□□ -0.48
TREX1-203ENST00000456089 KLF2Q9Y5W3 355 aaPredicted RBP12.05□□□□□ -0.48
TREX1-203ENST00000456089 AKAP9Q99996 3911 aa12.05□□□□□ -0.48
TREX1-203ENST00000456089 NCKAP5O14513 1909 aa12.05□□□□□ -0.48
TREX1-203ENST00000456089 DNAJC13O75165 2243 aa12.05□□□□□ -0.48
TREX1-203ENST00000456089 HCFC1P51610 2035 aa12.04□□□□□ -0.48
TREX1-203ENST00000456089 OTOGQ6ZRI0 2925 aa12.04□□□□□ -0.48
TREX1-203ENST00000456089 TEP1Q99973 2627 aaKnown RBP12.04□□□□□ -0.48
TREX1-203ENST00000456089 H0YIV9 168 aa12.04□□□□□ -0.48
TREX1-203ENST00000456089 GOLGA8RI6L899 631 aa12.04□□□□□ -0.48
TREX1-203ENST00000456089 TBX6O95947 436 aaPredicted RBP12.04□□□□□ -0.48
TREX1-203ENST00000456089 IFNA16P05015 189 aa12.04□□□□□ -0.48
TREX1-203ENST00000456089 PYGBP11216 843 aa12.04□□□□□ -0.48
TREX1-203ENST00000456089 COX6B1P14854 86 aa12.04□□□□□ -0.48
TREX1-203ENST00000456089 ZNF24P17028 368 aa12.04□□□□□ -0.48
TREX1-203ENST00000456089 KRT15P19012 456 aa12.04□□□□□ -0.48
TREX1-203ENST00000456089 HIST1H1TP22492 207 aaPredicted RBP12.04□□□□□ -0.48
TREX1-203ENST00000456089 CPN2P22792 545 aa12.04□□□□□ -0.48
TREX1-203ENST00000456089 ATP5A1P25705 553 aaKnown RBP12.04□□□□□ -0.48
TREX1-203ENST00000456089 GCAP28676 217 aa12.04□□□□□ -0.48
TREX1-203ENST00000456089 TLX1P31314 330 aaPredicted RBP12.04□□□□□ -0.48
TREX1-203ENST00000456089 MEOX1P50221 254 aa12.04□□□□□ -0.48
TREX1-203ENST00000456089 GPR85P60893 370 aa12.04□□□□□ -0.48
TREX1-203ENST00000456089 RPS13P62277 151 aaKnown RBP12.04□□□□□ -0.48
TREX1-203ENST00000456089 IFT88Q13099 833 aa12.04□□□□□ -0.48
TREX1-203ENST00000456089 SLAMF1Q13291 335 aa12.04□□□□□ -0.48
TREX1-203ENST00000456089 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.04□□□□□ -0.48
TREX1-203ENST00000456089 KRTCAP3Q53RY4 240 aa12.04□□□□□ -0.48
TREX1-203ENST00000456089 DEPDC1Q5TB30 811 aa12.04□□□□□ -0.48
TREX1-203ENST00000456089 OR4C11Q6IEV9 310 aa12.04□□□□□ -0.48
TREX1-203ENST00000456089 RPTNQ6XPR3 784 aa12.04□□□□□ -0.48
TREX1-203ENST00000456089 Q6ZPB1 254 aaPredicted RBP12.04□□□□□ -0.48
TREX1-203ENST00000456089 MDGA2Q7Z553 956 aa12.04□□□□□ -0.48
TREX1-203ENST00000456089 MILR1Q7Z6M3 343 aa12.04□□□□□ -0.48
TREX1-203ENST00000456089 HORMAD2Q8N7B1 307 aa12.04□□□□□ -0.48
TREX1-203ENST00000456089 ACOT4Q8N9L9 421 aa12.04□□□□□ -0.48
TREX1-203ENST00000456089 FAM98AQ8NCA5 519 aaKnown RBP12.04□□□□□ -0.48
TREX1-203ENST00000456089 APCDD1LQ8NCL9 501 aa12.04□□□□□ -0.48
TREX1-203ENST00000456089 C7orf57Q8NEG2 295 aa12.04□□□□□ -0.48
TREX1-203ENST00000456089 NCLNQ969V3 563 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms