RNA–Protein interactions for RNA: ENST00000456009.4

CCDC144A-210, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5 BASIC

Gene CCDC144A, Length 2,306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-210ENST00000456009 HSPB3Q12988 150 aa16.74■□□□□ 0.27
CCDC144A-210ENST00000456009 TP53BP2Q13625 1128 aa16.74■□□□□ 0.27
CCDC144A-210ENST00000456009 SEC23BQ15437 767 aa16.74■□□□□ 0.27
CCDC144A-210ENST00000456009 HNRNPA1L2Q32P51 320 aaKnown RBP16.74■□□□□ 0.27
CCDC144A-210ENST00000456009 DEPDC1Q5TB30 811 aa16.74■□□□□ 0.27
CCDC144A-210ENST00000456009 LCTLQ6UWM7 567 aa16.74■□□□□ 0.27
CCDC144A-210ENST00000456009 WASH2PQ6VEQ5 465 aa16.74■□□□□ 0.27
CCDC144A-210ENST00000456009 MMAAQ8IVH4 418 aaKnown RBP16.74■□□□□ 0.27
CCDC144A-210ENST00000456009 CLIP4Q8N3C7 705 aa16.74■□□□□ 0.27
CCDC144A-210ENST00000456009 SPPL3Q8TCT6 385 aa16.74■□□□□ 0.27
CCDC144A-210ENST00000456009 RAD51AP1Q96B01 352 aa16.74■□□□□ 0.27
CCDC144A-210ENST00000456009 IL4I1Q96RQ9 567 aa16.74■□□□□ 0.27
CCDC144A-210ENST00000456009 MMP27Q9H306 513 aa16.74■□□□□ 0.27
CCDC144A-210ENST00000456009 LHX9Q9NQ69 397 aa16.74■□□□□ 0.27
CCDC144A-210ENST00000456009 GPR34Q9UPC5 381 aa16.74■□□□□ 0.27
CCDC144A-210ENST00000456009 CHD9Q3L8U1 2897 aa16.74■□□□□ 0.27
CCDC144A-210ENST00000456009 XIRP2A4UGR9 3374 aa16.74■□□□□ 0.27
CCDC144A-210ENST00000456009 ZAR1LA6NP61 321 aa16.74■□□□□ 0.27
CCDC144A-210ENST00000456009 H7BY64 318 aa16.74■□□□□ 0.27
CCDC144A-210ENST00000456009 SLC9A3R1O14745 358 aaPredicted RBP16.74■□□□□ 0.27
CCDC144A-210ENST00000456009 CTNNB1P35222 781 aa16.74■□□□□ 0.27
CCDC144A-210ENST00000456009 CRISP1P54107 249 aa16.74■□□□□ 0.27
CCDC144A-210ENST00000456009 RPS3AP61247 264 aaKnown RBP16.74■□□□□ 0.27
CCDC144A-210ENST00000456009 DPTQ07507 201 aa16.74■□□□□ 0.27
CCDC144A-210ENST00000456009 KHDRBS2Q5VWX1 349 aaKnown RBP16.74■□□□□ 0.27
CCDC144A-210ENST00000456009 USP43Q70EL4 1123 aa16.74■□□□□ 0.27
CCDC144A-210ENST00000456009 CACTIN-AS1Q8N1I8 211 aa16.74■□□□□ 0.27
CCDC144A-210ENST00000456009 AMER3Q8N944 861 aa16.74■□□□□ 0.27
CCDC144A-210ENST00000456009 OR4D11Q8NGI4 311 aa16.74■□□□□ 0.27
CCDC144A-210ENST00000456009 TMEM19Q96HH6 336 aa16.74■□□□□ 0.27
CCDC144A-210ENST00000456009 FAM210AQ96ND0 272 aa16.74■□□□□ 0.27
CCDC144A-210ENST00000456009 PRAP1Q96NZ9 151 aa16.74■□□□□ 0.27
CCDC144A-210ENST00000456009 SCHIP1Q9P0W5 487 aaPredicted RBP16.74■□□□□ 0.27
CCDC144A-210ENST00000456009 MRPS23Q9Y3D9 190 aaKnown RBP16.74■□□□□ 0.27
CCDC144A-210ENST00000456009 PCDHGA3Q9Y5H0 932 aa16.74■□□□□ 0.27
CCDC144A-210ENST00000456009 PPM1DO15297 605 aa16.73■□□□□ 0.27
CCDC144A-210ENST00000456009 ZW10O43264 779 aa16.73■□□□□ 0.27
CCDC144A-210ENST00000456009 SOX14O95416 240 aa16.73■□□□□ 0.27
CCDC144A-210ENST00000456009 SEPHS1P49903 392 aa16.73■□□□□ 0.27
CCDC144A-210ENST00000456009 CNTN1Q12860 1018 aa16.73■□□□□ 0.27
CCDC144A-210ENST00000456009 CAMK1Q14012 370 aa16.73■□□□□ 0.27
CCDC144A-210ENST00000456009 MED22Q15528 200 aa16.73■□□□□ 0.27
CCDC144A-210ENST00000456009 SAXO2Q658L1 398 aa16.73■□□□□ 0.27
CCDC144A-210ENST00000456009 PTCHD4Q6ZW05 846 aa16.73■□□□□ 0.27
CCDC144A-210ENST00000456009 IKBIPQ70UQ0 350 aa16.73■□□□□ 0.27
CCDC144A-210ENST00000456009 LYSMD2Q8IV50 215 aa16.73■□□□□ 0.27
CCDC144A-210ENST00000456009 ETFBKMTQ8IXQ9 262 aa16.73■□□□□ 0.27
CCDC144A-210ENST00000456009 TAGAPQ8N103 731 aa16.73■□□□□ 0.27
CCDC144A-210ENST00000456009 KRT78Q8N1N4 520 aa16.73■□□□□ 0.27
CCDC144A-210ENST00000456009 FAM83FQ8NEG4 500 aaPredicted RBP16.73■□□□□ 0.27
CCDC144A-210ENST00000456009 TMIEQ8NEW7 156 aa16.73■□□□□ 0.27
CCDC144A-210ENST00000456009 OR8D1Q8WZ84 308 aa16.73■□□□□ 0.27
CCDC144A-210ENST00000456009 UBE2E3Q969T4 207 aa16.73■□□□□ 0.27
CCDC144A-210ENST00000456009 NEURL3Q96EH8 262 aa16.73■□□□□ 0.27
CCDC144A-210ENST00000456009 ZNF514Q96K75 400 aaPredicted RBP16.73■□□□□ 0.27
CCDC144A-210ENST00000456009 KCND3Q9UK17 655 aa16.73■□□□□ 0.27
CCDC144A-210ENST00000456009 SLC27A6Q9Y2P4 619 aa16.73■□□□□ 0.27
CCDC144A-210ENST00000456009 INSL6Q9Y581 213 aa16.73■□□□□ 0.27
CCDC144A-210ENST00000456009 A0A0G2JN53 185 aa16.73■□□□□ 0.27
CCDC144A-210ENST00000456009 AGAP5A6NIR3 686 aa16.73■□□□□ 0.27
CCDC144A-210ENST00000456009 TBX1O43435 398 aa16.73■□□□□ 0.27
CCDC144A-210ENST00000456009 MFN2O95140 757 aa16.73■□□□□ 0.27
CCDC144A-210ENST00000456009 CDC42P60953 191 aa16.73■□□□□ 0.27
CCDC144A-210ENST00000456009 TCTN3Q6NUS6 607 aa16.73■□□□□ 0.27
CCDC144A-210ENST00000456009 OLIG3Q7RTU3 272 aa16.73■□□□□ 0.27
CCDC144A-210ENST00000456009 PDZD3Q86UT5 571 aa16.73■□□□□ 0.27
CCDC144A-210ENST00000456009 EXOSC8Q96B26 276 aaKnown RBP16.73■□□□□ 0.27
CCDC144A-210ENST00000456009 MIR1-1HGQ9H1L0 117 aa16.73■□□□□ 0.27
CCDC144A-210ENST00000456009 C11orf16Q9NQ32 467 aa16.73■□□□□ 0.27
CCDC144A-210ENST00000456009 SIRT3Q9NTG7 399 aaPredicted RBP16.73■□□□□ 0.27
CCDC144A-210ENST00000456009 SPATA7Q9P0W8 599 aa16.73■□□□□ 0.27
CCDC144A-210ENST00000456009 KIAA1549LQ6ZVL6 1849 aa16.72■□□□□ 0.27
CCDC144A-210ENST00000456009 HEPACAM2A8MVW5 462 aa16.72■□□□□ 0.27
CCDC144A-210ENST00000456009 TMPRSS11DO60235 418 aa16.72■□□□□ 0.27
CCDC144A-210ENST00000456009 UPK1BO75841 260 aa16.72■□□□□ 0.27
CCDC144A-210ENST00000456009 MAGP20916 626 aa16.72■□□□□ 0.27
CCDC144A-210ENST00000456009 KELP23276 732 aa16.72■□□□□ 0.27
CCDC144A-210ENST00000456009 BMPR1AP36894 532 aa16.72■□□□□ 0.27
CCDC144A-210ENST00000456009 ZNF234Q14588 700 aa16.72■□□□□ 0.27
CCDC144A-210ENST00000456009 EIF4HQ15056 248 aaKnown RBP16.72■□□□□ 0.27
CCDC144A-210ENST00000456009 GAB4Q2WGN9 574 aa16.72■□□□□ 0.27
CCDC144A-210ENST00000456009 ZNF765Q7L2R6 523 aa16.72■□□□□ 0.27
CCDC144A-210ENST00000456009 C6orf120Q7Z4R8 191 aa16.72■□□□□ 0.27
CCDC144A-210ENST00000456009 AMZ2Q86W34 360 aa16.72■□□□□ 0.27
CCDC144A-210ENST00000456009 C17orf64Q86WR6 236 aa16.72■□□□□ 0.27
CCDC144A-210ENST00000456009 CACUL1Q86Y37 369 aa16.72■□□□□ 0.27
CCDC144A-210ENST00000456009 LACC1Q8IV20 430 aa16.72■□□□□ 0.27
CCDC144A-210ENST00000456009 CYP4Z2PQ8N1L4 340 aa16.72■□□□□ 0.27
CCDC144A-210ENST00000456009 CELF5Q8N6W0 485 aaKnown RBP16.72■□□□□ 0.27
CCDC144A-210ENST00000456009 VANGL1Q8TAA9 524 aaPredicted RBP16.72■□□□□ 0.27
CCDC144A-210ENST00000456009 WFIKKN2Q8TEU8 576 aa16.72■□□□□ 0.27
CCDC144A-210ENST00000456009 ZNF707Q96C28 371 aaPredicted RBP16.72■□□□□ 0.27
CCDC144A-210ENST00000456009 PSD2Q9BQI7 771 aa16.72■□□□□ 0.27
CCDC144A-210ENST00000456009 MS4A8Q9BY19 250 aa16.72■□□□□ 0.27
CCDC144A-210ENST00000456009 REV1Q9UBZ9 1251 aa16.72■□□□□ 0.27
CCDC144A-210ENST00000456009 TSC22D4Q9Y3Q8 395 aa16.72■□□□□ 0.27
CCDC144A-210ENST00000456009 GOLGA4Q13439 2230 aaKnown RBP16.72■□□□□ 0.27
CCDC144A-210ENST00000456009 HMGN4O00479 90 aa16.71■□□□□ 0.27
CCDC144A-210ENST00000456009 HOXC11O43248 304 aaPredicted RBP16.71■□□□□ 0.27
CCDC144A-210ENST00000456009 GTF2E2P29084 291 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms