RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 ABRACLQ9P1F3 81 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 B4GALT7Q9UBV7 327 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 POLHQ9Y253 713 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 A0A075B6Q4 140 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 GGT3PA6NGU5 568 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 PRKCGP05129 697 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 TCEA1P23193 301 aaKnown RBP5.03□□□□□ -1.6
CSMD3-204ENST00000455883 GGT2P36268 569 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 RFX5P48382 616 aaPredicted RBP5.03□□□□□ -1.6
CSMD3-204ENST00000455883 KCNC1P48547 511 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 GDI2P50395 445 aaKnown RBP5.03□□□□□ -1.6
CSMD3-204ENST00000455883 RRAS2P62070 204 aaPredicted RBP5.03□□□□□ -1.6
CSMD3-204ENST00000455883 RNF212Q495C1 297 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 HGSNATQ68CP4 663 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 TRMT10BQ6PF06 316 aaKnown RBP5.03□□□□□ -1.6
CSMD3-204ENST00000455883 AMZ2Q86W34 360 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 ZNF676Q8N7Q3 588 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 LGALS12Q96DT0 336 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 PPM1MQ96MI6 270 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 TSC2P49815 1807 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 A0A1W2PRQ8 180 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 SPATA31C2B4DYI2 1134 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 STK25O00506 426 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 ZMPSTE24O75844 475 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 GABBR2O75899 941 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 TSPAN15O95858 294 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 TRA2BP62995 288 aaKnown RBP5.03□□□□□ -1.6
CSMD3-204ENST00000455883 DCUN1D3Q8IWE4 304 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 ALG3Q92685 438 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 SLC35G5Q96KT7 338 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 TMED9Q9BVK6 235 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 CNOT6Q9ULM6 557 aaKnown RBP5.03□□□□□ -1.6
CSMD3-204ENST00000455883 TEX264Q9Y6I9 313 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 NSG1A0A0A6YYJ2 146 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 AIPO00170 330 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 SEC14L5O43304 696 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 NDUFB5O43674 189 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 ERAL1O75616 437 aaKnown RBP5.03□□□□□ -1.6
CSMD3-204ENST00000455883 TOX4O94842 621 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 SDHBP21912 280 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 UQCRC2P22695 453 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 CPN2P22792 545 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 WDR45BQ5MNZ6 344 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 OGFRL1Q5TC84 451 aaPredicted RBP5.03□□□□□ -1.6
CSMD3-204ENST00000455883 FAM109AQ8N4B1 249 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 ACBD7Q8N6N7 88 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 ANKRD53Q8N9V6 530 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 OR4K1Q8NGD4 311 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 DNAJC19Q96DA6 116 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 COQ10AQ96MF6 247 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 SLC19A3Q9BZV2 496 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 EBF3Q9H4W6 596 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 KLK4Q9Y5K2 254 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 PTPRDP23468 1912 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 PP2D1A8MPX8 630 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 FAM155AB1AL88 458 aaPredicted RBP5.03□□□□□ -1.6
CSMD3-204ENST00000455883 HHLA1C9JL84 531 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 FFAR2O15552 330 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 OIP5O43482 229 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 PEX10O60683 326 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 SLC25A14O95258 325 aaPredicted RBP5.03□□□□□ -1.6
CSMD3-204ENST00000455883 CALCRP30988 508 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 SSX2Q16385 188 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 FAM98CQ17RN3 349 aaKnown RBP5.03□□□□□ -1.6
CSMD3-204ENST00000455883 C9orf64Q5T6V5 341 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 LPCAT4Q643R3 524 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 BLOC1S3Q6QNY0 202 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 TTLL10Q6ZVT0 673 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 NDUFAF7Q7L592 441 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 ZNF467Q7Z7K2 595 aaPredicted RBP5.03□□□□□ -1.6
CSMD3-204ENST00000455883 TRMT10AQ8TBZ6 339 aaKnown RBP5.03□□□□□ -1.6
CSMD3-204ENST00000455883 C10orf90Q96M02 699 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 WDR18Q9BV38 432 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 SMCO4Q9NRQ5 59 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 ASB6Q9NWX5 421 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 OGDHLQ9ULD0 1010 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 ARL5AQ9Y689 179 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 INPPL1O15357 1258 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 UPK1BO75841 260 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 CCR10P46092 362 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 DGKQP52824 942 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 ZNF267Q14586 743 aaPredicted RBP5.03□□□□□ -1.6
CSMD3-204ENST00000455883 MOB1BQ7L9L4 216 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 FUNDC1Q8IVP5 155 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 ZNF808Q8N4W9 903 aaPredicted RBP5.03□□□□□ -1.6
CSMD3-204ENST00000455883 SLC43A3Q8NBI5 491 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 PROKR1Q8TCW9 393 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 C1orf74Q96LT6 269 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 RBP7Q96R05 134 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 ELF4Q99607 663 aaPredicted RBP5.03□□□□□ -1.6
CSMD3-204ENST00000455883 OMDQ99983 421 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 EMC7Q9NPA0 242 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 PNO1Q9NRX1 252 aaKnown RBP5.03□□□□□ -1.6
CSMD3-204ENST00000455883 E7ESA3 106 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 HSD11B1P28845 292 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 SERPINF1P36955 418 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 CRYBB1P53674 252 aaPredicted RBP5.03□□□□□ -1.6
CSMD3-204ENST00000455883 RAB1AP62820 205 aa5.03□□□□□ -1.6
CSMD3-204ENST00000455883 PUM1Q14671 1186 aaKnown RBP eCLIP5.03□□□□□ -1.6
CSMD3-204ENST00000455883 TAF1CQ15572 869 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms