RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 STX4Q12846 297 aa21.39■■□□□ 1.01
PTPRA-208ENST00000455631 PDAP1Q13442 181 aaKnown RBP21.39■■□□□ 1.01
PTPRA-208ENST00000455631 Q5PR19 223 aa21.39■■□□□ 1.01
PTPRA-208ENST00000455631 SLC22A10Q63ZE4 541 aa21.39■■□□□ 1.01
PTPRA-208ENST00000455631 CXXC5Q7LFL8 322 aaKnown RBP21.39■■□□□ 1.01
PTPRA-208ENST00000455631 LACC1Q8IV20 430 aa21.39■■□□□ 1.01
PTPRA-208ENST00000455631 RNF10Q8N5U6 811 aaKnown RBP21.39■■□□□ 1.01
PTPRA-208ENST00000455631 C2CD4AQ8NCU7 369 aaPredicted RBP21.39■■□□□ 1.01
PTPRA-208ENST00000455631 SPATA3Q8NHX4 192 aa21.39■■□□□ 1.01
PTPRA-208ENST00000455631 NANOS1Q8WY41 292 aaKnown RBP21.39■■□□□ 1.01
PTPRA-208ENST00000455631 COX4I2Q96KJ9 171 aa21.39■■□□□ 1.01
PTPRA-208ENST00000455631 JSRP1Q96MG2 331 aaPredicted RBP21.39■■□□□ 1.01
PTPRA-208ENST00000455631 RUNDC3BQ96NL0 473 aa21.39■■□□□ 1.01
PTPRA-208ENST00000455631 ALOXE3Q9BYJ1 711 aa21.39■■□□□ 1.01
PTPRA-208ENST00000455631 ZFP64Q9NPA5 681 aa21.39■■□□□ 1.01
PTPRA-208ENST00000455631 COPS7AQ9UBW8 275 aa21.39■■□□□ 1.01
PTPRA-208ENST00000455631 VTI1BQ9UEU0 232 aa21.39■■□□□ 1.01
PTPRA-208ENST00000455631 SLC22A14Q9Y267 594 aa21.39■■□□□ 1.01
PTPRA-208ENST00000455631 KCNE2Q9Y6J6 123 aa21.39■■□□□ 1.01
PTPRA-208ENST00000455631 EEF1E1-BLOC1S5C9J1V9 151 aa21.38■■□□□ 1.01
PTPRA-208ENST00000455631 ARHGEF9O43307 516 aa21.38■■□□□ 1.01
PTPRA-208ENST00000455631 EEF1E1O43324 174 aaKnown RBP21.38■■□□□ 1.01
PTPRA-208ENST00000455631 GOSR1O95249 250 aa21.38■■□□□ 1.01
PTPRA-208ENST00000455631 EPPINO95925 133 aa21.38■■□□□ 1.01
PTPRA-208ENST00000455631 FGGP02679 453 aa21.38■■□□□ 1.01
PTPRA-208ENST00000455631 ENO2P09104 434 aaPredicted RBP21.38■■□□□ 1.01
PTPRA-208ENST00000455631 TIMP3P35625 211 aa21.38■■□□□ 1.01
PTPRA-208ENST00000455631 PLA2G16P53816 162 aa21.38■■□□□ 1.01
PTPRA-208ENST00000455631 ASPHQ12797 758 aa21.38■■□□□ 1.01
PTPRA-208ENST00000455631 POMZP3Q6PJE2 187 aa21.38■■□□□ 1.01
PTPRA-208ENST00000455631 ADGRD1Q6QNK2 874 aa21.38■■□□□ 1.01
PTPRA-208ENST00000455631 AGGF1Q8N302 714 aaeCLIP21.38■■□□□ 1.01
PTPRA-208ENST00000455631 ACKR4Q9NPB9 350 aa21.38■■□□□ 1.01
PTPRA-208ENST00000455631 HOMER3Q9NSC5 361 aa21.38■■□□□ 1.01
PTPRA-208ENST00000455631 RTTNQ86VV8 2226 aa21.37■■□□□ 1.01
PTPRA-208ENST00000455631 LRIT2A6NDA9 550 aa21.37■■□□□ 1.01
PTPRA-208ENST00000455631 LRRC3CA6NJW4 275 aa21.37■■□□□ 1.01
PTPRA-208ENST00000455631 AHRRA9YTQ3 701 aa21.37■■□□□ 1.01
PTPRA-208ENST00000455631 H7C1Q1 480 aa21.37■■□□□ 1.01
PTPRA-208ENST00000455631 CYR61O00622 381 aa21.37■■□□□ 1.01
PTPRA-208ENST00000455631 CTNSO60931 367 aa21.37■■□□□ 1.01
PTPRA-208ENST00000455631 CERS1P27544 350 aa21.37■■□□□ 1.01
PTPRA-208ENST00000455631 PGGT1BP53609 377 aa21.37■■□□□ 1.01
PTPRA-208ENST00000455631 LIM2P55344 173 aa21.37■■□□□ 1.01
PTPRA-208ENST00000455631 SORDQ00796 357 aa21.37■■□□□ 1.01
PTPRA-208ENST00000455631 CXorf67Q86X51 503 aaPredicted RBP21.37■■□□□ 1.01
PTPRA-208ENST00000455631 P3H2Q8IVL5 708 aa21.37■■□□□ 1.01
PTPRA-208ENST00000455631 CIARTQ8N365 385 aaPredicted RBP21.37■■□□□ 1.01
PTPRA-208ENST00000455631 LRRC25Q8N386 305 aaPredicted RBP21.37■■□□□ 1.01
PTPRA-208ENST00000455631 MAIP1Q8WWC4 291 aa21.37■■□□□ 1.01
PTPRA-208ENST00000455631 HSPBAP1Q96EW2 488 aa21.37■■□□□ 1.01
PTPRA-208ENST00000455631 QRFPRQ96P65 431 aa21.37■■□□□ 1.01
PTPRA-208ENST00000455631 COPS7BQ9H9Q2 264 aaPredicted RBP21.37■■□□□ 1.01
PTPRA-208ENST00000455631 DAPP1Q9UN19 280 aa21.37■■□□□ 1.01
PTPRA-208ENST00000455631 KIAA1549Q9HCM3 1950 aa21.36■■□□□ 1.01
PTPRA-208ENST00000455631 HRGP04196 525 aa21.36■■□□□ 1.01
PTPRA-208ENST00000455631 PTMSP20962 102 aa21.36■■□□□ 1.01
PTPRA-208ENST00000455631 AGFG1P52594 562 aaKnown RBP21.36■■□□□ 1.01
PTPRA-208ENST00000455631 RCN2Q14257 317 aa21.36■■□□□ 1.01
PTPRA-208ENST00000455631 EFTUD2Q15029 972 aaKnown RBP eCLIP21.36■■□□□ 1.01
PTPRA-208ENST00000455631 MPEG1Q2M385 716 aa21.36■■□□□ 1.01
PTPRA-208ENST00000455631 ZNF791Q3KP31 576 aaPredicted RBP21.36■■□□□ 1.01
PTPRA-208ENST00000455631 TRIM40Q6P9F5 258 aa21.36■■□□□ 1.01
PTPRA-208ENST00000455631 TMEM139Q8IV31 216 aa21.36■■□□□ 1.01
PTPRA-208ENST00000455631 MCUQ8NE86 351 aa21.36■■□□□ 1.01
PTPRA-208ENST00000455631 TTLQ8NG68 377 aa21.36■■□□□ 1.01
PTPRA-208ENST00000455631 SLC22A8Q8TCC7 542 aa21.36■■□□□ 1.01
PTPRA-208ENST00000455631 PAQR8Q8TEZ7 354 aa21.36■■□□□ 1.01
PTPRA-208ENST00000455631 SERINC2Q96SA4 455 aa21.36■■□□□ 1.01
PTPRA-208ENST00000455631 EPB41L4BQ9H329 900 aa21.36■■□□□ 1.01
PTPRA-208ENST00000455631 SH2D2AQ9NP31 389 aa21.36■■□□□ 1.01
PTPRA-208ENST00000455631 QPCTLQ9NXS2 382 aa21.36■■□□□ 1.01
PTPRA-208ENST00000455631 GUCA1BQ9UMX6 200 aa21.36■■□□□ 1.01
PTPRA-208ENST00000455631 FREM3P0C091 2139 aa21.35■■□□□ 1.01
PTPRA-208ENST00000455631 SMAD7O15105 426 aaKnown RBP21.35■■□□□ 1.01
PTPRA-208ENST00000455631 LDB3O75112 727 aa21.35■■□□□ 1.01
PTPRA-208ENST00000455631 GDF1P27539 372 aa21.35■■□□□ 1.01
PTPRA-208ENST00000455631 GABRB3P28472 473 aa21.35■■□□□ 1.01
PTPRA-208ENST00000455631 MTTPP55157 894 aa21.35■■□□□ 1.01
PTPRA-208ENST00000455631 DUSP8Q13202 625 aa21.35■■□□□ 1.01
PTPRA-208ENST00000455631 SERTAD2Q14140 314 aa21.35■■□□□ 1.01
PTPRA-208ENST00000455631 SLBPQ14493 270 aaKnown RBP eCLIP21.35■■□□□ 1.01
PTPRA-208ENST00000455631 PIGGQ5H8A4 983 aa21.35■■□□□ 1.01
PTPRA-208ENST00000455631 SBSNQ6UWP8 590 aa21.35■■□□□ 1.01
PTPRA-208ENST00000455631 TMIGD1Q6UXZ0 262 aa21.35■■□□□ 1.01
PTPRA-208ENST00000455631 FAM13CQ8NE31 585 aa21.35■■□□□ 1.01
PTPRA-208ENST00000455631 OR2L5Q8NG80 312 aa21.35■■□□□ 1.01
PTPRA-208ENST00000455631 ZNF721Q8TF20 911 aa21.35■■□□□ 1.01
PTPRA-208ENST00000455631 SPACA9Q96E40 222 aaPredicted RBP21.35■■□□□ 1.01
PTPRA-208ENST00000455631 REXO4Q9GZR2 422 aaKnown RBP21.35■■□□□ 1.01
PTPRA-208ENST00000455631 IKZF3Q9UKT9 509 aa21.35■■□□□ 1.01
PTPRA-208ENST00000455631 A0A1W2PPR1 153 aa21.34■■□□□ 1.01
PTPRA-208ENST00000455631 H2AFYO75367 372 aaKnown RBP21.34■■□□□ 1.01
PTPRA-208ENST00000455631 LRATO95237 230 aa21.34■■□□□ 1.01
PTPRA-208ENST00000455631 ETHE1O95571 254 aa21.34■■□□□ 1.01
PTPRA-208ENST00000455631 KRT14P02533 472 aa21.34■■□□□ 1.01
PTPRA-208ENST00000455631 ZNF75DP51815 510 aa21.34■■□□□ 1.01
PTPRA-208ENST00000455631 PPP2R2BQ00005 443 aa21.34■■□□□ 1.01
PTPRA-208ENST00000455631 ID2Q02363 134 aa21.34■■□□□ 1.01
PTPRA-208ENST00000455631 CRYZQ08257 329 aaKnown RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms