RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 AIFM1O95831 613 aa13.25□□□□□ -0.29
HDAC4-205ENST00000454542 FAM58BPP0C7Q3 252 aa13.25□□□□□ -0.29
HDAC4-205ENST00000454542 DHRS4L1P0CG22 281 aa13.25□□□□□ -0.29
HDAC4-205ENST00000454542 NR2F6P10588 404 aa13.25□□□□□ -0.29
HDAC4-205ENST00000454542 PPP2R1BP30154 601 aa13.25□□□□□ -0.29
HDAC4-205ENST00000454542 BUD31P41223 144 aaPredicted RBP13.25□□□□□ -0.29
HDAC4-205ENST00000454542 GPR143P51810 404 aa13.25□□□□□ -0.29
HDAC4-205ENST00000454542 SLC13A2Q13183 592 aa13.25□□□□□ -0.29
HDAC4-205ENST00000454542 SERTAD2Q14140 314 aa13.25□□□□□ -0.29
HDAC4-205ENST00000454542 PAGE2Q7Z2X7 111 aa13.25□□□□□ -0.29
HDAC4-205ENST00000454542 CLNKQ7Z7G1 428 aa13.25□□□□□ -0.29
HDAC4-205ENST00000454542 LGI4Q8N135 537 aa13.25□□□□□ -0.29
HDAC4-205ENST00000454542 SIRT6Q8N6T7 355 aa13.25□□□□□ -0.29
HDAC4-205ENST00000454542 C7orf57Q8NEG2 295 aa13.25□□□□□ -0.29
HDAC4-205ENST00000454542 B3GNT7Q8NFL0 401 aa13.25□□□□□ -0.29
HDAC4-205ENST00000454542 LMF1Q96S06 567 aa13.25□□□□□ -0.29
HDAC4-205ENST00000454542 MECRQ9BV79 373 aa13.25□□□□□ -0.29
HDAC4-205ENST00000454542 EPS8L2Q9H6S3 715 aa13.25□□□□□ -0.29
HDAC4-205ENST00000454542 RPF2Q9H7B2 306 aaKnown RBP13.25□□□□□ -0.29
HDAC4-205ENST00000454542 SIRT5Q9NXA8 310 aa13.25□□□□□ -0.29
HDAC4-205ENST00000454542 TEX10Q9NXF1 929 aaPredicted RBP13.25□□□□□ -0.29
HDAC4-205ENST00000454542 AHSPQ9NZD4 102 aa13.25□□□□□ -0.29
HDAC4-205ENST00000454542 VTI1BQ9UEU0 232 aa13.25□□□□□ -0.29
HDAC4-205ENST00000454542 ZNF223Q9UK11 482 aaPredicted RBP13.25□□□□□ -0.29
HDAC4-205ENST00000454542 TIMM22Q9Y584 194 aa13.25□□□□□ -0.29
HDAC4-205ENST00000454542 CSAG2Q9Y5P2 127 aa13.25□□□□□ -0.29
HDAC4-205ENST00000454542 HEMK1Q9Y5R4 338 aaPredicted RBP13.25□□□□□ -0.29
HDAC4-205ENST00000454542 A0A1W2PR48 441 aa13.24□□□□□ -0.29
HDAC4-205ENST00000454542 SLC28A2O43868 658 aa13.24□□□□□ -0.29
HDAC4-205ENST00000454542 LDB3O75112 727 aa13.24□□□□□ -0.29
HDAC4-205ENST00000454542 ULK1O75385 1050 aa13.24□□□□□ -0.29
HDAC4-205ENST00000454542 PRKRAO75569 313 aaKnown RBP13.24□□□□□ -0.29
HDAC4-205ENST00000454542 BPGMP07738 259 aa13.24□□□□□ -0.29
HDAC4-205ENST00000454542 CHN1P15882 459 aa13.24□□□□□ -0.29
HDAC4-205ENST00000454542 ARRB2P32121 409 aa13.24□□□□□ -0.29
HDAC4-205ENST00000454542 SERPINB5P36952 375 aa13.24□□□□□ -0.29
HDAC4-205ENST00000454542 ASPHQ12797 758 aa13.24□□□□□ -0.29
HDAC4-205ENST00000454542 SGO1Q5FBB7 561 aa13.24□□□□□ -0.29
HDAC4-205ENST00000454542 CFAP157Q5JU67 520 aa13.24□□□□□ -0.29
HDAC4-205ENST00000454542 B3GNTL1Q67FW5 361 aaPredicted RBP13.24□□□□□ -0.29
HDAC4-205ENST00000454542 C18orf63Q68DL7 685 aa13.24□□□□□ -0.29
HDAC4-205ENST00000454542 GALNT18Q6P9A2 607 aa13.24□□□□□ -0.29
HDAC4-205ENST00000454542 CYP20A1Q6UW02 462 aa13.24□□□□□ -0.29
HDAC4-205ENST00000454542 ATG14Q6ZNE5 492 aa13.24□□□□□ -0.29
HDAC4-205ENST00000454542 TRIM46Q7Z4K8 759 aa13.24□□□□□ -0.29
HDAC4-205ENST00000454542 CUZD1Q86UP6 607 aa13.24□□□□□ -0.29
HDAC4-205ENST00000454542 TEX19Q8NA77 164 aa13.24□□□□□ -0.29
HDAC4-205ENST00000454542 CHTF18Q8WVB6 975 aa13.24□□□□□ -0.29
HDAC4-205ENST00000454542 TANKQ92844 425 aa13.24□□□□□ -0.29
HDAC4-205ENST00000454542 CNDP1Q96KN2 507 aa13.24□□□□□ -0.29
HDAC4-205ENST00000454542 PRM3Q9NNZ6 103 aa13.24□□□□□ -0.29
HDAC4-205ENST00000454542 NMRK1Q9NWW6 199 aa13.24□□□□□ -0.29
HDAC4-205ENST00000454542 PTGFRNQ9P2B2 879 aa13.24□□□□□ -0.29
HDAC4-205ENST00000454542 VPS29Q9UBQ0 182 aa13.24□□□□□ -0.29
HDAC4-205ENST00000454542 TM9SF1O15321 606 aa13.23□□□□□ -0.29
HDAC4-205ENST00000454542 MYO1DO94832 1006 aa13.23□□□□□ -0.29
HDAC4-205ENST00000454542 GBAP04062 536 aa13.23□□□□□ -0.29
HDAC4-205ENST00000454542 KLK1P06870 262 aa13.23□□□□□ -0.29
HDAC4-205ENST00000454542 UROSP10746 265 aa13.23□□□□□ -0.29
HDAC4-205ENST00000454542 PRPH2P23942 346 aa13.23□□□□□ -0.29
HDAC4-205ENST00000454542 STT3AP46977 705 aa13.23□□□□□ -0.29
HDAC4-205ENST00000454542 SERPINB4P48594 390 aa13.23□□□□□ -0.29
HDAC4-205ENST00000454542 TRA2BP62995 288 aaKnown RBP13.23□□□□□ -0.29
HDAC4-205ENST00000454542 RAE1P78406 368 aaKnown RBP13.23□□□□□ -0.29
HDAC4-205ENST00000454542 FOLH1Q04609 750 aa13.23□□□□□ -0.29
HDAC4-205ENST00000454542 ACTN3Q08043 901 aaPredicted RBP13.23□□□□□ -0.29
HDAC4-205ENST00000454542 SPIN4Q56A73 249 aa13.23□□□□□ -0.29
HDAC4-205ENST00000454542 KANK2Q63ZY3 851 aa13.23□□□□□ -0.29
HDAC4-205ENST00000454542 OR52E8Q6IFG1 317 aa13.23□□□□□ -0.29
HDAC4-205ENST00000454542 ZNF605Q86T29 641 aa13.23□□□□□ -0.29
HDAC4-205ENST00000454542 CRLF3Q8IUI8 442 aa13.23□□□□□ -0.29
HDAC4-205ENST00000454542 KIF2BQ8N4N8 673 aa13.23□□□□□ -0.29
HDAC4-205ENST00000454542 ZADH2Q8N4Q0 377 aa13.23□□□□□ -0.29
HDAC4-205ENST00000454542 C1orf52Q8N6N3 182 aaKnown RBP13.23□□□□□ -0.29
HDAC4-205ENST00000454542 OR14A16Q8NHC5 309 aa13.23□□□□□ -0.29
HDAC4-205ENST00000454542 DNAJB14Q8TBM8 379 aa13.23□□□□□ -0.29
HDAC4-205ENST00000454542 PTPMT1Q8WUK0 201 aaPredicted RBP13.23□□□□□ -0.29
HDAC4-205ENST00000454542 MCM8Q9UJA3 840 aa13.23□□□□□ -0.29
HDAC4-205ENST00000454542 B3GNT3Q9Y2A9 372 aa13.23□□□□□ -0.29
HDAC4-205ENST00000454542 CCL27Q9Y4X3 112 aa13.23□□□□□ -0.29
HDAC4-205ENST00000454542 PCDHGA10Q9Y5H3 936 aa13.23□□□□□ -0.29
HDAC4-205ENST00000454542 CDK2AP1O14519 115 aa13.22□□□□□ -0.29
HDAC4-205ENST00000454542 RSL1D1O76021 490 aaKnown RBP13.22□□□□□ -0.29
HDAC4-205ENST00000454542 DDAH2O95865 285 aa13.22□□□□□ -0.29
HDAC4-205ENST00000454542 CHRNGP07510 517 aa13.22□□□□□ -0.29
HDAC4-205ENST00000454542 TLX1P31314 330 aaPredicted RBP13.22□□□□□ -0.29
HDAC4-205ENST00000454542 TIA1P31483 386 aaKnown RBP eCLIP13.22□□□□□ -0.29
HDAC4-205ENST00000454542 PLIN5Q00G26 463 aa13.22□□□□□ -0.29
HDAC4-205ENST00000454542 HMGCS1Q01581 520 aa13.22□□□□□ -0.29
HDAC4-205ENST00000454542 STX4Q12846 297 aa13.22□□□□□ -0.29
HDAC4-205ENST00000454542 BIKQ13323 160 aa13.22□□□□□ -0.29
HDAC4-205ENST00000454542 MPP2Q14168 576 aa13.22□□□□□ -0.29
HDAC4-205ENST00000454542 CASP8Q14790 479 aa13.22□□□□□ -0.29
HDAC4-205ENST00000454542 SPRED3Q2MJR0 410 aa13.22□□□□□ -0.29
HDAC4-205ENST00000454542 COLEC12Q5KU26 742 aa13.22□□□□□ -0.29
HDAC4-205ENST00000454542 NDUFAF5Q5TEU4 345 aa13.22□□□□□ -0.29
HDAC4-205ENST00000454542 LINC00696Q6ZRV3 163 aa13.22□□□□□ -0.29
HDAC4-205ENST00000454542 ZCCHC23Q6ZST2 131 aa13.22□□□□□ -0.29
HDAC4-205ENST00000454542 PRICKLE2Q7Z3G6 844 aa13.22□□□□□ -0.29
HDAC4-205ENST00000454542 TMEM132CQ8N3T6 1108 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms