RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 CTNSO60931 367 aa10.8□□□□□ -0.68
GARNL3-210ENST00000453030 P04436 131 aa10.8□□□□□ -0.68
GARNL3-210ENST00000453030 HOXD4P09016 255 aaPredicted RBP10.8□□□□□ -0.68
GARNL3-210ENST00000453030 CCDC166P0CW27 439 aa10.8□□□□□ -0.68
GARNL3-210ENST00000453030 GLI4P10075 376 aa10.8□□□□□ -0.68
GARNL3-210ENST00000453030 CNR1P21554 472 aa10.8□□□□□ -0.68
GARNL3-210ENST00000453030 MSH2P43246 934 aa10.8□□□□□ -0.68
GARNL3-210ENST00000453030 MAN2A2P49641 1150 aa10.8□□□□□ -0.68
GARNL3-210ENST00000453030 RNF4P78317 190 aa10.8□□□□□ -0.68
GARNL3-210ENST00000453030 TGM3Q08188 693 aa10.8□□□□□ -0.68
GARNL3-210ENST00000453030 SERTAD2Q14140 314 aa10.8□□□□□ -0.68
GARNL3-210ENST00000453030 OR4D1Q15615 310 aa10.8□□□□□ -0.68
GARNL3-210ENST00000453030 CES4AQ5XG92 561 aa10.8□□□□□ -0.68
GARNL3-210ENST00000453030 WDR53Q7Z5U6 358 aaPredicted RBP10.8□□□□□ -0.68
GARNL3-210ENST00000453030 GPSM1Q86YR5 675 aa10.8□□□□□ -0.68
GARNL3-210ENST00000453030 ZBED8Q8IZ13 594 aa10.8□□□□□ -0.68
GARNL3-210ENST00000453030 CLYBLQ8N0X4 340 aa10.8□□□□□ -0.68
GARNL3-210ENST00000453030 GOLM1Q8NBJ4 401 aa10.8□□□□□ -0.68
GARNL3-210ENST00000453030 PTCD3Q96EY7 689 aaKnown RBP10.8□□□□□ -0.68
GARNL3-210ENST00000453030 DOCK7Q96N67 2140 aa10.8□□□□□ -0.68
GARNL3-210ENST00000453030 MAPKAP1Q9BPZ7 522 aa10.8□□□□□ -0.68
GARNL3-210ENST00000453030 TTYH2Q9BSA4 534 aa10.8□□□□□ -0.68
GARNL3-210ENST00000453030 EFCAB11Q9BUY7 163 aa10.8□□□□□ -0.68
GARNL3-210ENST00000453030 CAPS2Q9BXY5 557 aa10.8□□□□□ -0.68
GARNL3-210ENST00000453030 PITHD1Q9GZP4 211 aaPredicted RBP10.8□□□□□ -0.68
GARNL3-210ENST00000453030 EHD1Q9H4M9 534 aa10.8□□□□□ -0.68
GARNL3-210ENST00000453030 LDAHQ9H6V9 325 aa10.8□□□□□ -0.68
GARNL3-210ENST00000453030 EXO5Q9H790 373 aa10.8□□□□□ -0.68
GARNL3-210ENST00000453030 IL1RL2Q9HB29 575 aa10.8□□□□□ -0.68
GARNL3-210ENST00000453030 POPDC3Q9HBV1 291 aa10.8□□□□□ -0.68
GARNL3-210ENST00000453030 PRDM7Q9NQW5 492 aa10.8□□□□□ -0.68
GARNL3-210ENST00000453030 SMYD2Q9NRG4 433 aa10.8□□□□□ -0.68
GARNL3-210ENST00000453030 SACM1LQ9NTJ5 587 aa10.8□□□□□ -0.68
GARNL3-210ENST00000453030 TRMT1Q9NXH9 659 aaKnown RBP10.8□□□□□ -0.68
GARNL3-210ENST00000453030 NSMCE4AQ9NXX6 385 aa10.8□□□□□ -0.68
GARNL3-210ENST00000453030 TUBA8Q9NY65 449 aaPredicted RBP10.8□□□□□ -0.68
GARNL3-210ENST00000453030 CD274Q9NZQ7 290 aa10.8□□□□□ -0.68
GARNL3-210ENST00000453030 ACAD8Q9UKU7 415 aa10.8□□□□□ -0.68
GARNL3-210ENST00000453030 ZNF490Q9ULM2 529 aaPredicted RBP10.8□□□□□ -0.68
GARNL3-210ENST00000453030 MTO1Q9Y2Z2 717 aaKnown RBP10.8□□□□□ -0.68
GARNL3-210ENST00000453030 ATG4BQ9Y4P1 393 aa10.8□□□□□ -0.68
GARNL3-210ENST00000453030 MED12Q93074 2177 aa10.8□□□□□ -0.68
GARNL3-210ENST00000453030 A0A0G2JNJ9 132 aa10.79□□□□□ -0.68
GARNL3-210ENST00000453030 SAP18O00422 153 aaKnown RBP10.79□□□□□ -0.68
GARNL3-210ENST00000453030 AQP7O14520 342 aa10.79□□□□□ -0.68
GARNL3-210ENST00000453030 FGF17O60258 216 aa10.79□□□□□ -0.68
GARNL3-210ENST00000453030 STK16O75716 305 aa10.79□□□□□ -0.68
GARNL3-210ENST00000453030 NADKO95544 446 aaPredicted RBP10.79□□□□□ -0.68
GARNL3-210ENST00000453030 ETHE1O95571 254 aa10.79□□□□□ -0.68
GARNL3-210ENST00000453030 IGHG3P01860 377 aa10.79□□□□□ -0.68
GARNL3-210ENST00000453030 PCNAP12004 261 aa10.79□□□□□ -0.68
GARNL3-210ENST00000453030 TCP1P17987 556 aaKnown RBP10.79□□□□□ -0.68
GARNL3-210ENST00000453030 EPORP19235 508 aa10.79□□□□□ -0.68
GARNL3-210ENST00000453030 DNAJA1P31689 397 aaKnown RBP10.79□□□□□ -0.68
GARNL3-210ENST00000453030 GMPRP36959 345 aa10.79□□□□□ -0.68
GARNL3-210ENST00000453030 PIGAP37287 484 aa10.79□□□□□ -0.68
GARNL3-210ENST00000453030 ADH7P40394 386 aa10.79□□□□□ -0.68
GARNL3-210ENST00000453030 SSR2P43308 183 aa10.79□□□□□ -0.68
GARNL3-210ENST00000453030 ZFP36L2P47974 494 aaKnown RBP10.79□□□□□ -0.68
GARNL3-210ENST00000453030 IRF8Q02556 426 aa10.79□□□□□ -0.68
GARNL3-210ENST00000453030 FOXO1Q12778 655 aa10.79□□□□□ -0.68
GARNL3-210ENST00000453030 ASPHQ12797 758 aa10.79□□□□□ -0.68
GARNL3-210ENST00000453030 SNTB1Q13884 538 aaKnown RBP10.79□□□□□ -0.68
GARNL3-210ENST00000453030 PAGE2BQ5JRK9 111 aa10.79□□□□□ -0.68
GARNL3-210ENST00000453030 C1orf185Q5T7R7 199 aa10.79□□□□□ -0.68
GARNL3-210ENST00000453030 PRAMEF20Q5VT98 475 aa10.79□□□□□ -0.68
GARNL3-210ENST00000453030 RTL6Q6ICC9 239 aa10.79□□□□□ -0.68
GARNL3-210ENST00000453030 OPN5Q6U736 354 aa10.79□□□□□ -0.68
GARNL3-210ENST00000453030 SYDE1Q6ZW31 735 aaPredicted RBP10.79□□□□□ -0.68
GARNL3-210ENST00000453030 UBE3DQ7Z6J8 389 aa10.79□□□□□ -0.68
GARNL3-210ENST00000453030 OR5L2Q8NGL0 311 aa10.79□□□□□ -0.68
GARNL3-210ENST00000453030 DOK4Q8TEW6 326 aa10.79□□□□□ -0.68
GARNL3-210ENST00000453030 ZNF721Q8TF20 911 aa10.79□□□□□ -0.68
GARNL3-210ENST00000453030 KIAA1191Q96A73 305 aa10.79□□□□□ -0.68
GARNL3-210ENST00000453030 SGCZQ96LD1 299 aa10.79□□□□□ -0.68
GARNL3-210ENST00000453030 MCMBPQ9BTE3 642 aa10.79□□□□□ -0.68
GARNL3-210ENST00000453030 CNPPD1Q9BV87 410 aa10.79□□□□□ -0.68
GARNL3-210ENST00000453030 MS4A8Q9BY19 250 aa10.79□□□□□ -0.68
GARNL3-210ENST00000453030 LYRM4Q9HD34 91 aa10.79□□□□□ -0.68
GARNL3-210ENST00000453030 SEMA4BQ9NPR2 832 aaPredicted RBP10.79□□□□□ -0.68
GARNL3-210ENST00000453030 ALKBH4Q9NXW9 302 aa10.79□□□□□ -0.68
GARNL3-210ENST00000453030 MOCS1Q9NZB8 636 aa10.79□□□□□ -0.68
GARNL3-210ENST00000453030 Q9UFV3 132 aa10.79□□□□□ -0.68
GARNL3-210ENST00000453030 L3MBTL1Q9Y468 752 aa10.79□□□□□ -0.68
GARNL3-210ENST00000453030 SPACA6W5XKT8 324 aa10.79□□□□□ -0.68
GARNL3-210ENST00000453030 TRGV5A0A0B4J1U4 118 aa10.78□□□□□ -0.68
GARNL3-210ENST00000453030 EFCAB8A8MWE9 144 aa10.78□□□□□ -0.68
GARNL3-210ENST00000453030 CXorf49A8MYA2 514 aaPredicted RBP10.78□□□□□ -0.68
GARNL3-210ENST00000453030 HRKO00198 91 aa10.78□□□□□ -0.68
GARNL3-210ENST00000453030 TP73O15350 636 aa10.78□□□□□ -0.68
GARNL3-210ENST00000453030 WDR1O75083 606 aa10.78□□□□□ -0.68
GARNL3-210ENST00000453030 PRKRAO75569 313 aaKnown RBP10.78□□□□□ -0.68
GARNL3-210ENST00000453030 LRATO95237 230 aa10.78□□□□□ -0.68
GARNL3-210ENST00000453030 WISP3O95389 354 aaPredicted RBP10.78□□□□□ -0.68
GARNL3-210ENST00000453030 S100BP04271 92 aaPredicted RBP10.78□□□□□ -0.68
GARNL3-210ENST00000453030 COX7A2P14406 83 aa10.78□□□□□ -0.68
GARNL3-210ENST00000453030 CD1DP15813 335 aa10.78□□□□□ -0.68
GARNL3-210ENST00000453030 ENDOUP21128 410 aaKnown RBP10.78□□□□□ -0.68
GARNL3-210ENST00000453030 HIST1H1TP22492 207 aaPredicted RBP10.78□□□□□ -0.68
GARNL3-210ENST00000453030 CPN2P22792 545 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms