RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 MINDY4Q4G0A6 757 aa12.27□□□□□ -0.45
VPS33A-202ENST00000451053 C6orf136Q5SQH8 315 aa12.27□□□□□ -0.45
VPS33A-202ENST00000451053 MFSD4BQ5TF39 518 aa12.27□□□□□ -0.45
VPS33A-202ENST00000451053 GALNT18Q6P9A2 607 aa12.27□□□□□ -0.45
VPS33A-202ENST00000451053 LRRC69Q6ZNQ3 347 aa12.27□□□□□ -0.45
VPS33A-202ENST00000451053 RIPOR1Q6ZS17 1223 aa12.27□□□□□ -0.45
VPS33A-202ENST00000451053 TRPM8Q7Z2W7 1104 aa12.27□□□□□ -0.45
VPS33A-202ENST00000451053 MTDHQ86UE4 582 aaKnown RBP12.27□□□□□ -0.45
VPS33A-202ENST00000451053 GPR180Q86V85 440 aa12.27□□□□□ -0.45
VPS33A-202ENST00000451053 FNDC5Q8NAU1 212 aa12.27□□□□□ -0.45
VPS33A-202ENST00000451053 MESP1Q9BRJ9 268 aa12.27□□□□□ -0.45
VPS33A-202ENST00000451053 CRB3Q9BUF7 120 aa12.27□□□□□ -0.45
VPS33A-202ENST00000451053 VN1R1Q9GZP7 353 aa12.27□□□□□ -0.45
VPS33A-202ENST00000451053 SIRT5Q9NXA8 310 aa12.27□□□□□ -0.45
VPS33A-202ENST00000451053 TEX10Q9NXF1 929 aaPredicted RBP12.27□□□□□ -0.45
VPS33A-202ENST00000451053 ASIC5Q9NY37 505 aa12.27□□□□□ -0.45
VPS33A-202ENST00000451053 NOP53Q9NZM5 478 aaKnown RBP12.27□□□□□ -0.45
VPS33A-202ENST00000451053 C3orf18Q9UK00 162 aa12.27□□□□□ -0.45
VPS33A-202ENST00000451053 MKL2Q9ULH7 1088 aa12.27□□□□□ -0.45
VPS33A-202ENST00000451053 ZMIZ1Q9ULJ6 1067 aa12.27□□□□□ -0.45
VPS33A-202ENST00000451053 DLGAP4Q9Y2H0 992 aa12.27□□□□□ -0.45
VPS33A-202ENST00000451053 WDFY3Q8IZQ1 3526 aa12.27□□□□□ -0.45
VPS33A-202ENST00000451053 CCDC88CQ9P219 2028 aa12.27□□□□□ -0.45
VPS33A-202ENST00000451053 GNG14A0A1W2PPG7 69 aa12.26□□□□□ -0.45
VPS33A-202ENST00000451053 A0A1W2PR48 441 aa12.26□□□□□ -0.45
VPS33A-202ENST00000451053 NKX2-8O15522 239 aa12.26□□□□□ -0.45
VPS33A-202ENST00000451053 PROM1O43490 865 aa12.26□□□□□ -0.45
VPS33A-202ENST00000451053 AIFM1O95831 613 aa12.26□□□□□ -0.45
VPS33A-202ENST00000451053 RECKO95980 971 aa12.26□□□□□ -0.45
VPS33A-202ENST00000451053 HEXBP07686 556 aa12.26□□□□□ -0.45
VPS33A-202ENST00000451053 ANXA4P09525 319 aaPredicted RBP12.26□□□□□ -0.45
VPS33A-202ENST00000451053 IL10P22301 178 aa12.26□□□□□ -0.45
VPS33A-202ENST00000451053 EMP2P54851 167 aa12.26□□□□□ -0.45
VPS33A-202ENST00000451053 BTG2P78543 158 aa12.26□□□□□ -0.45
VPS33A-202ENST00000451053 RHAGQ02094 409 aa12.26□□□□□ -0.45
VPS33A-202ENST00000451053 TNFRSF17Q02223 184 aa12.26□□□□□ -0.45
VPS33A-202ENST00000451053 SQLEQ14534 574 aa12.26□□□□□ -0.45
VPS33A-202ENST00000451053 RPS6KA2Q15349 733 aa12.26□□□□□ -0.45
VPS33A-202ENST00000451053 RFTN2Q52LD8 501 aaPredicted RBP12.26□□□□□ -0.45
VPS33A-202ENST00000451053 ATP1A1-AS1Q5TC04 95 aa12.26□□□□□ -0.45
VPS33A-202ENST00000451053 FAM91A1Q658Y4 838 aa12.26□□□□□ -0.45
VPS33A-202ENST00000451053 C18orf63Q68DL7 685 aa12.26□□□□□ -0.45
VPS33A-202ENST00000451053 FAAH2Q6GMR7 532 aa12.26□□□□□ -0.45
VPS33A-202ENST00000451053 NOXRED1Q6NXP6 359 aa12.26□□□□□ -0.45
VPS33A-202ENST00000451053 MMP21Q8N119 569 aa12.26□□□□□ -0.45
VPS33A-202ENST00000451053 ADAMTS18Q8TE60 1221 aa12.26□□□□□ -0.45
VPS33A-202ENST00000451053 UCN3Q969E3 161 aa12.26□□□□□ -0.45
VPS33A-202ENST00000451053 TM4SF18Q96CE8 201 aa12.26□□□□□ -0.45
VPS33A-202ENST00000451053 FCRL1Q96LA6 429 aa12.26□□□□□ -0.45
VPS33A-202ENST00000451053 PHF11Q9UIL8 331 aa12.26□□□□□ -0.45
VPS33A-202ENST00000451053 CEP295Q9C0D2 2601 aa12.26□□□□□ -0.45
VPS33A-202ENST00000451053 APC2O95996 2303 aa12.26□□□□□ -0.45
VPS33A-202ENST00000451053 GLOD5A6NK44 160 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 CCT8L1PA6NM43 557 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 ZNF891A8MT65 544 aaPredicted RBP12.25□□□□□ -0.45
VPS33A-202ENST00000451053 TGFBR3LH3BV60 316 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 FURINP09958 794 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 NR2F6P10588 404 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 PRKAR1AP10644 381 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 PRPS2P11908 318 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 MAOAP21397 527 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 JAK1P23458 1154 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 OTX2P32243 289 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 MRPL19P49406 292 aaKnown RBP12.25□□□□□ -0.45
VPS33A-202ENST00000451053 SSPNQ14714 243 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 NDUFAF5Q5TEU4 345 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 BROXQ5VW32 411 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 CCDC81Q6ZN84 652 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 LANCL3Q6ZV70 420 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 MED25Q71SY5 747 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 PPP1R32Q7Z5V6 425 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 CLNKQ7Z7G1 428 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 SCUBE1Q8IWY4 988 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 MIER2Q8N344 545 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 CPSF7Q8N684 471 aaKnown RBP12.25□□□□□ -0.45
VPS33A-202ENST00000451053 ADAMTS17Q8TE56 1095 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 C16orf78Q8WTQ4 265 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 TSLPQ969D9 159 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 ERP27Q96DN0 273 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 CATSPER2Q96P56 530 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 C1orf50Q9BV19 199 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 NMUR2Q9GZQ4 415 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 MYLK2Q9H1R3 596 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 CPNE5Q9HCH3 593 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 SAR1AQ9NR31 198 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 PRTFDC1Q9NRG1 225 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 SEMA3GQ9NS98 782 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 AIG1Q9NVV5 245 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 TMEM45AQ9NWC5 275 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 MS4A12Q9NXJ0 267 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 MAPRE3Q9UPY8 281 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 CLDN16Q9Y5I7 305 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 CAPN7Q9Y6W3 813 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 SPACA6W5XKT8 324 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 PCSK5Q92824 1860 aa12.25□□□□□ -0.45
VPS33A-202ENST00000451053 IGKV3D-11A0A0A0MRZ8 115 aa12.24□□□□□ -0.45
VPS33A-202ENST00000451053 MYOCOSA0A1B0GUC4 107 aa12.24□□□□□ -0.45
VPS33A-202ENST00000451053 CDC14CA4D256 554 aa12.24□□□□□ -0.45
VPS33A-202ENST00000451053 WASHC1A8K0Z3 465 aa12.24□□□□□ -0.45
VPS33A-202ENST00000451053 PGRMC2O15173 223 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms