RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 KANK2Q63ZY3 851 aa16.04■□□□□ 0.16
PRPF40A-204ENST00000450303 FRG2Q64ET8 278 aa16.04■□□□□ 0.16
PRPF40A-204ENST00000450303 TMEM205Q6UW68 189 aa16.04■□□□□ 0.16
PRPF40A-204ENST00000450303 LANCL3Q6ZV70 420 aa16.04■□□□□ 0.16
PRPF40A-204ENST00000450303 LAS2Q8IYD9 372 aa16.04■□□□□ 0.16
PRPF40A-204ENST00000450303 TRPV3Q8NET8 790 aa16.04■□□□□ 0.16
PRPF40A-204ENST00000450303 OR5T3Q8NGG3 340 aa16.04■□□□□ 0.16
PRPF40A-204ENST00000450303 AGR3Q8TD06 166 aa16.04■□□□□ 0.16
PRPF40A-204ENST00000450303 SELENOMQ8WWX9 145 aa16.04■□□□□ 0.16
PRPF40A-204ENST00000450303 METTL21AQ8WXB1 218 aa16.04■□□□□ 0.16
PRPF40A-204ENST00000450303 PSMF1Q92530 271 aa16.04■□□□□ 0.16
PRPF40A-204ENST00000450303 FRG2BQ96QU4 278 aa16.04■□□□□ 0.16
PRPF40A-204ENST00000450303 CCT7Q99832 543 aa16.04■□□□□ 0.16
PRPF40A-204ENST00000450303 SLCO1B3Q9NPD5 702 aa16.04■□□□□ 0.16
PRPF40A-204ENST00000450303 PLA2G3Q9NZ20 509 aa16.04■□□□□ 0.16
PRPF40A-204ENST00000450303 ZNF225Q9UK10 706 aa16.04■□□□□ 0.16
PRPF40A-204ENST00000450303 PCDHGA10Q9Y5H3 936 aa16.04■□□□□ 0.16
PRPF40A-204ENST00000450303 LOC102723996A0A087X1L8 192 aa16.03■□□□□ 0.16
PRPF40A-204ENST00000450303 SEC24DO94855 1032 aaPredicted RBP16.03■□□□□ 0.16
PRPF40A-204ENST00000450303 F10P00742 488 aa16.03■□□□□ 0.16
PRPF40A-204ENST00000450303 SERPINA7P05543 415 aa16.03■□□□□ 0.16
PRPF40A-204ENST00000450303 KITP10721 976 aa16.03■□□□□ 0.16
PRPF40A-204ENST00000450303 CD22P20273 847 aa16.03■□□□□ 0.16
PRPF40A-204ENST00000450303 SCTRP47872 440 aa16.03■□□□□ 0.16
PRPF40A-204ENST00000450303 OLR1P78380 273 aa16.03■□□□□ 0.16
PRPF40A-204ENST00000450303 MFAP5Q13361 173 aa16.03■□□□□ 0.16
PRPF40A-204ENST00000450303 FHL5Q5TD97 284 aa16.03■□□□□ 0.16
PRPF40A-204ENST00000450303 B3GNTL1Q67FW5 361 aaPredicted RBP16.03■□□□□ 0.16
PRPF40A-204ENST00000450303 OR7G3Q8NG95 312 aa16.03■□□□□ 0.16
PRPF40A-204ENST00000450303 PRR7Q8TB68 274 aa16.03■□□□□ 0.16
PRPF40A-204ENST00000450303 PEX11GQ96HA9 241 aa16.03■□□□□ 0.16
PRPF40A-204ENST00000450303 LMF1Q96S06 567 aa16.03■□□□□ 0.16
PRPF40A-204ENST00000450303 ZNF700Q9H0M5 742 aa16.03■□□□□ 0.16
PRPF40A-204ENST00000450303 RHBGQ9H310 441 aa16.03■□□□□ 0.16
PRPF40A-204ENST00000450303 RIC8BQ9NVN3 520 aa16.03■□□□□ 0.16
PRPF40A-204ENST00000450303 PNPOQ9NVS9 261 aa16.03■□□□□ 0.16
PRPF40A-204ENST00000450303 NMRK1Q9NWW6 199 aa16.03■□□□□ 0.16
PRPF40A-204ENST00000450303 ZFP69BQ9UJL9 534 aa16.03■□□□□ 0.16
PRPF40A-204ENST00000450303 TIMM22Q9Y584 194 aa16.03■□□□□ 0.16
PRPF40A-204ENST00000450303 SLC22A7Q9Y694 548 aa16.03■□□□□ 0.16
PRPF40A-204ENST00000450303 COL12A1Q99715 3063 aa16.03■□□□□ 0.16
PRPF40A-204ENST00000450303 A0A1B0GTL3 188 aa16.02■□□□□ 0.16
PRPF40A-204ENST00000450303 BLACEA4D250 179 aa16.02■□□□□ 0.16
PRPF40A-204ENST00000450303 TRPC5OSA6NMA1 111 aa16.02■□□□□ 0.16
PRPF40A-204ENST00000450303 ANKRD65E5RJM6 399 aa16.02■□□□□ 0.16
PRPF40A-204ENST00000450303 MANBAO00462 879 aa16.02■□□□□ 0.16
PRPF40A-204ENST00000450303 CDC123O75794 336 aaPredicted RBP16.02■□□□□ 0.16
PRPF40A-204ENST00000450303 DCTN3O75935 186 aa16.02■□□□□ 0.16
PRPF40A-204ENST00000450303 AGFG2O95081 481 aa16.02■□□□□ 0.16
PRPF40A-204ENST00000450303 TGDSO95455 350 aa16.02■□□□□ 0.16
PRPF40A-204ENST00000450303 ZNF888P0CJ79 500 aaPredicted RBP16.02■□□□□ 0.16
PRPF40A-204ENST00000450303 ITGAMP11215 1152 aa16.02■□□□□ 0.16
PRPF40A-204ENST00000450303 HSD3B1P14060 373 aa16.02■□□□□ 0.16
PRPF40A-204ENST00000450303 HSD3B2P26439 372 aa16.02■□□□□ 0.16
PRPF40A-204ENST00000450303 PIK3CBP42338 1070 aa16.02■□□□□ 0.16
PRPF40A-204ENST00000450303 DEFB134Q4QY38 66 aa16.02■□□□□ 0.16
PRPF40A-204ENST00000450303 CLEC6AQ6EIG7 209 aa16.02■□□□□ 0.16
PRPF40A-204ENST00000450303 CPEB2Q7Z5Q1 589 aaKnown RBP16.02■□□□□ 0.16
PRPF40A-204ENST00000450303 ANKRD53Q8N9V6 530 aa16.02■□□□□ 0.16
PRPF40A-204ENST00000450303 WDR20Q8TBZ3 569 aa16.02■□□□□ 0.16
PRPF40A-204ENST00000450303 TWIST2Q8WVJ9 160 aa16.02■□□□□ 0.16
PRPF40A-204ENST00000450303 MTFMTQ96DP5 389 aaKnown RBP16.02■□□□□ 0.16
PRPF40A-204ENST00000450303 KCNA7Q96RP8 456 aa16.02■□□□□ 0.16
PRPF40A-204ENST00000450303 SIKE1Q9BRV8 207 aa16.02■□□□□ 0.16
PRPF40A-204ENST00000450303 ZNF490Q9ULM2 529 aaPredicted RBP16.02■□□□□ 0.16
PRPF40A-204ENST00000450303 USH1CQ9Y6N9 552 aa16.02■□□□□ 0.16
PRPF40A-204ENST00000450303 CAPN7Q9Y6W3 813 aa16.02■□□□□ 0.16
PRPF40A-204ENST00000450303 LRRK2Q5S007 2527 aa16.01■□□□□ 0.15
PRPF40A-204ENST00000450303 A0A1W2PQ72 361 aa16.01■□□□□ 0.15
PRPF40A-204ENST00000450303 SERTM1A2A2V5 107 aa16.01■□□□□ 0.15
PRPF40A-204ENST00000450303 URADA6NGE7 173 aa16.01■□□□□ 0.15
PRPF40A-204ENST00000450303 SLC28A1O00337 649 aa16.01■□□□□ 0.15
PRPF40A-204ENST00000450303 FOXE1O00358 373 aaPredicted RBP16.01■□□□□ 0.15
PRPF40A-204ENST00000450303 HDAC3O15379 428 aa16.01■□□□□ 0.15
PRPF40A-204ENST00000450303 SEMA7AO75326 666 aa16.01■□□□□ 0.15
PRPF40A-204ENST00000450303 CLEC3AO75596 197 aa16.01■□□□□ 0.15
PRPF40A-204ENST00000450303 ALOX12P18054 663 aa16.01■□□□□ 0.15
PRPF40A-204ENST00000450303 SERPINB3P29508 390 aa16.01■□□□□ 0.15
PRPF40A-204ENST00000450303 FOXA1P55317 472 aa16.01■□□□□ 0.15
PRPF40A-204ENST00000450303 RAB8AP61006 207 aa16.01■□□□□ 0.15
PRPF40A-204ENST00000450303 ARG2P78540 354 aa16.01■□□□□ 0.15
PRPF40A-204ENST00000450303 RGS1Q08116 209 aa16.01■□□□□ 0.15
PRPF40A-204ENST00000450303 CSTF3Q12996 717 aaKnown RBP16.01■□□□□ 0.15
PRPF40A-204ENST00000450303 PWP1Q13610 501 aa16.01■□□□□ 0.15
PRPF40A-204ENST00000450303 DDX39BQ13838 428 aaKnown RBP16.01■□□□□ 0.15
PRPF40A-204ENST00000450303 ZNF169Q14929 603 aaPredicted RBP16.01■□□□□ 0.15
PRPF40A-204ENST00000450303 IMPG1Q17R60 797 aa16.01■□□□□ 0.15
PRPF40A-204ENST00000450303 SGO1Q5FBB7 561 aa16.01■□□□□ 0.15
PRPF40A-204ENST00000450303 RNF165Q6ZSG1 346 aa16.01■□□□□ 0.15
PRPF40A-204ENST00000450303 ANKRD37Q7Z713 158 aa16.01■□□□□ 0.15
PRPF40A-204ENST00000450303 DDIASQ8IXT1 998 aa16.01■□□□□ 0.15
PRPF40A-204ENST00000450303 OR1N1Q8NGS0 311 aa16.01■□□□□ 0.15
PRPF40A-204ENST00000450303 NT5CQ8TCD5 201 aa16.01■□□□□ 0.15
PRPF40A-204ENST00000450303 CMTM7Q96FZ5 175 aa16.01■□□□□ 0.15
PRPF40A-204ENST00000450303 IMMP1LQ96LU5 166 aa16.01■□□□□ 0.15
PRPF40A-204ENST00000450303 CENPKQ9BS16 269 aa16.01■□□□□ 0.15
PRPF40A-204ENST00000450303 TUBB6Q9BUF5 446 aa16.01■□□□□ 0.15
PRPF40A-204ENST00000450303 KLHL31Q9H511 634 aa16.01■□□□□ 0.15
PRPF40A-204ENST00000450303 BRF2Q9HAW0 419 aa16.01■□□□□ 0.15
PRPF40A-204ENST00000450303 TNFRSF12AQ9NP84 129 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms