RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 SSTP61278 116 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 C1DQ13901 141 aaKnown RBP8.24□□□□□ -1.09
LSM5-208ENST00000450169 C3orf38Q5JPI3 329 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 DOK6Q6PKX4 331 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 PAQR3Q6TCH7 311 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 PTCHD4Q6ZW05 846 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 CBLL1Q75N03 491 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 NLRC3Q7RTR2 1065 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 HSD17B13Q7Z5P4 300 aaPredicted RBP8.24□□□□□ -1.09
LSM5-208ENST00000450169 MILR1Q7Z6M3 343 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 SERPINA11Q86U17 422 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 PAQR7Q86WK9 346 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 MIB1Q86YT6 1006 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 UXS1Q8NBZ7 420 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 OR52P1PQ8NH57 321 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 SGK3Q96BR1 496 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 SCRN2Q96FV2 425 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 C7orf34Q96L11 122 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 SFXN2Q96NB2 322 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 PKMYT1Q99640 499 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 NIPSNAP1Q9BPW8 284 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 INPP5KQ9BT40 448 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 NFKBIZQ9BYH8 718 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 FZD8Q9H461 694 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 SERHLQ9NQF3 203 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 TMEM184CQ9NVA4 438 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 BABAM2Q9NXR7 383 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 DTX4Q9Y2E6 619 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 SNX10Q9Y5X0 201 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 LOC105369274A0A096LPK9 316 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 SLC28A1O00337 649 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 CASC3O15234 703 aaKnown RBP8.24□□□□□ -1.09
LSM5-208ENST00000450169 SGCEO43556 437 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 GLP2RO95838 553 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 SYPP08247 313 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 WARSP23381 471 aaKnown RBP8.24□□□□□ -1.09
LSM5-208ENST00000450169 PBX3P40426 434 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 BDKRB1P46663 353 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 CAV3P56539 151 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 FKBP1AP62942 108 aaKnown RBP8.24□□□□□ -1.09
LSM5-208ENST00000450169 MAD2L1Q13257 205 aaPredicted RBP8.24□□□□□ -1.09
LSM5-208ENST00000450169 UGT8Q16880 541 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 VMACQ2NL98 169 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 SLC10A6Q3KNW5 377 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 Q3ZCU0 254 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 ARHGAP15Q53QZ3 475 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 FAM198BQ6UWH4 519 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 THSD4Q6ZMP0 1018 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 CATSPERGQ6ZRH7 1159 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 USP50Q70EL3 339 aaPredicted RBP8.24□□□□□ -1.09
LSM5-208ENST00000450169 ANKRD46Q86W74 232 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 OR4N4Q8N0Y3 316 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 OR2T35Q8NGX2 323 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 PRMT6Q96LA8 375 aaPredicted RBP8.24□□□□□ -1.09
LSM5-208ENST00000450169 SARGQ9BW04 601 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 ABCG5Q9H222 651 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 ZNF768Q9H5H4 540 aaKnown RBP8.24□□□□□ -1.09
LSM5-208ENST00000450169 GSN-AS1Q9NRJ2 163 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 OR12D3Q9UGF7 316 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 FBXW11Q9UKB1 542 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 HCN2Q9UL51 889 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 ASB4Q9Y574 426 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 PARP14Q460N5 1801 aa8.24□□□□□ -1.09
LSM5-208ENST00000450169 TEX13CA0A0J9YWL9 993 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 SERTM1A2A2V5 107 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 TEX46H3BTG2 121 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 HMBSP08397 361 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 H2AFB1P0C5Y9 115 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 H2AFB2P0C5Z0 115 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 SULT1A3P0DMM9 295 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 SULT1A4P0DMN0 295 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 HOXB9P17482 250 aaPredicted RBP8.23□□□□□ -1.09
LSM5-208ENST00000450169 PTPN6P29350 595 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 PRKAR1BP31321 381 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 CDKN2CP42773 168 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 AVPR1BP47901 424 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 CTBP2P56545 445 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 PTGES3Q15185 160 aaKnown RBP8.23□□□□□ -1.09
LSM5-208ENST00000450169 USP39Q53GS9 565 aaKnown RBP8.23□□□□□ -1.09
LSM5-208ENST00000450169 SPIN4Q56A73 249 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 WASH2PQ6VEQ5 465 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 ASB18Q6ZVZ8 466 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 SYT14Q8NB59 555 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 PLA2G15Q8NCC3 412 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 OR4A15Q8NGL6 344 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 GPR150Q8NGU9 434 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 OR52N1Q8NH53 320 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 MOSPD2Q8NHP6 518 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 COQ8AQ8NI60 647 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 NANPQ8TBE9 248 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 LRRC46Q96FV0 321 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 C10orf90Q96M02 699 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 SLC2A13Q96QE2 648 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 SLC38A3Q99624 504 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 AARSD1Q9BTE6 412 aaKnown RBP8.23□□□□□ -1.09
LSM5-208ENST00000450169 ARNT2Q9HBZ2 717 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 ABCC13Q9NSE7 274 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 ERVK-19Q9WJR5 959 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 FAM50BQ9Y247 325 aa8.23□□□□□ -1.09
LSM5-208ENST00000450169 MAP4K5Q9Y4K4 846 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms