RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 A0A075B6Q4 140 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 A0A0U1RQF3 1178 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 M0R082 166 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 TAPBPO15533 448 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 FABP7O15540 132 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 KDELR3O43731 214 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 STX11O75558 287 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 PROS1P07225 676 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 CD3GP09693 182 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 PRKACAP17612 351 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 PCMT1P22061 227 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 STOMP27105 288 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 HBA1P69905 142 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 PRKCDQ05655 676 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 CXXC5Q7LFL8 322 aaKnown RBP11.87□□□□□ -0.51
UBE3B-204ENST00000449510 UBQLNLQ8IYU4 475 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 APCDD1Q8J025 514 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 FAM109AQ8N4B1 249 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 IL17RDQ8NFM7 739 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 AP2M1Q96CW1 435 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 STUB1Q9UNE7 303 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 HSPE1-MOB4S4R3N1 261 aa11.87□□□□□ -0.51
UBE3B-204ENST00000449510 DNAJC25-GNG10A0A024R161 153 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 DAPL1A0PJW8 107 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 GMFGO60234 142 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 SLC16A8O95907 504 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 HMGCLP35914 325 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 BMPR1AP36894 532 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 EPHB3P54753 998 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 HSF2Q03933 536 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 FAPQ12884 760 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 IHHQ14623 411 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 ATXN7L3Q14CW9 347 aaPredicted RBP11.86□□□□□ -0.51
UBE3B-204ENST00000449510 CCSAPQ6IQ19 270 aaPredicted RBP11.86□□□□□ -0.51
UBE3B-204ENST00000449510 SLC25A25Q6KCM7 469 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 FUT10Q6P4F1 479 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 DENND6BQ8NEG7 585 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 FUZQ9BT04 418 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 RBCK1Q9BYM8 510 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 MTG2Q9H4K7 406 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 BRD7Q9NPI1 651 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 ZDHHC3Q9NYG2 299 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 CNIH4Q9P003 139 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 TRPS1Q9UHF7 1281 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 PGAP2Q9UHJ9 254 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 TMPRSS11EQ9UL52 423 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 SLC6A14Q9UN76 642 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 PCDH8O95206 1070 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 LRG1P02750 347 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 GPR1P46091 355 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 DGKGP49619 791 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 ARHGDIBP52566 201 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 OC90Q02509 493 aaPredicted RBP11.86□□□□□ -0.51
UBE3B-204ENST00000449510 NTRK2Q16620 822 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 SLC5A12Q1EHB4 618 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 CBLL1Q75N03 491 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 MSRB3Q8IXL7 192 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 GALNT11Q8NCW6 608 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 CEP76Q8TAP6 659 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 ZBED3Q96IU2 234 aaPredicted RBP11.86□□□□□ -0.51
UBE3B-204ENST00000449510 QRFPRQ96P65 431 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 PSD2Q9BQI7 771 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 SPATA9Q9BWV2 254 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 FBXO10Q9UK96 956 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 RWDD3Q9Y3V2 267 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 MAU2Q9Y6X3 613 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 CACNA1IQ9P0X4 2223 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 DOCK5Q9H7D0 1870 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 PTPRFP10586 1907 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 COCHO43405 550 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 OR1F1O43749 312 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 PQBP1O60828 265 aaKnown RBP11.86□□□□□ -0.51
UBE3B-204ENST00000449510 RB1P06400 928 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 IL3P08700 152 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 ELFN1P0C7U0 828 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 OR12D1P0DN82 309 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 IFNGR2P38484 337 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 STARP49675 285 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 SMIM11AP58511 58 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 ADAM15Q13444 863 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 NDUFAF6Q330K2 333 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 CDK20Q8IZL9 346 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 OR6F1Q8NGZ6 308 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 TNFAIP8L1Q8WVP5 186 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 BRI3BPQ8WY22 251 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 DNAJA3Q96EY1 480 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 HRASLS5Q96KN8 279 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 MAGEB10Q96LZ2 347 aaPredicted RBP11.86□□□□□ -0.51
UBE3B-204ENST00000449510 RTP3Q9BQQ7 232 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 OSGIN1Q9UJX0 560 aa11.86□□□□□ -0.51
UBE3B-204ENST00000449510 NDRG4Q9ULP0 352 aaKnown RBP11.86□□□□□ -0.51
UBE3B-204ENST00000449510 TRBV4-1A0A0J9YWV2 114 aa11.85□□□□□ -0.51
UBE3B-204ENST00000449510 WASHC1A8K0Z3 465 aa11.85□□□□□ -0.51
UBE3B-204ENST00000449510 B4GALT3O60512 393 aa11.85□□□□□ -0.51
UBE3B-204ENST00000449510 PRMT3O60678 531 aa11.85□□□□□ -0.51
UBE3B-204ENST00000449510 HCN1O60741 890 aa11.85□□□□□ -0.51
UBE3B-204ENST00000449510 REM1O75628 298 aa11.85□□□□□ -0.51
UBE3B-204ENST00000449510 DDCP20711 480 aa11.85□□□□□ -0.51
UBE3B-204ENST00000449510 CCR7P32248 378 aa11.85□□□□□ -0.51
UBE3B-204ENST00000449510 TGFBR2P37173 567 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms