RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 DSELQ8IZU8 1212 aa18.18■□□□□ 0.5
RPS28-202ENST00000449223 GOT1L1Q8NHS2 421 aaPredicted RBP18.18■□□□□ 0.5
RPS28-202ENST00000449223 MMABQ96EY8 250 aaPredicted RBP18.18■□□□□ 0.5
RPS28-202ENST00000449223 ITCHQ96J02 903 aa18.18■□□□□ 0.5
RPS28-202ENST00000449223 GBP5Q96PP8 586 aa18.18■□□□□ 0.5
RPS28-202ENST00000449223 GPATCH1Q9BRR8 931 aaKnown RBP18.18■□□□□ 0.5
RPS28-202ENST00000449223 RPF2Q9H7B2 306 aaKnown RBP18.18■□□□□ 0.5
RPS28-202ENST00000449223 ACTR5Q9H9F9 607 aaPredicted RBP18.18■□□□□ 0.5
RPS28-202ENST00000449223 APMAPQ9HDC9 416 aa18.18■□□□□ 0.5
RPS28-202ENST00000449223 SLC35C2Q9NQQ7 365 aa18.18■□□□□ 0.5
RPS28-202ENST00000449223 ACSS1Q9NUB1 689 aaPredicted RBP18.18■□□□□ 0.5
RPS28-202ENST00000449223 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.18■□□□□ 0.5
RPS28-202ENST00000449223 GID8Q9NWU2 228 aa18.18■□□□□ 0.5
RPS28-202ENST00000449223 DHCR7Q9UBM7 475 aaKnown RBP18.18■□□□□ 0.5
RPS28-202ENST00000449223 CLCA2Q9UQC9 943 aa18.18■□□□□ 0.5
RPS28-202ENST00000449223 MAP4K5Q9Y4K4 846 aa18.18■□□□□ 0.5
RPS28-202ENST00000449223 CEP250Q9BV73 2442 aa18.17■□□□□ 0.5
RPS28-202ENST00000449223 SLC30A4O14863 429 aa18.17■□□□□ 0.5
RPS28-202ENST00000449223 CSO75390 466 aaKnown RBP18.17■□□□□ 0.5
RPS28-202ENST00000449223 ERN1O75460 977 aaKnown RBP18.17■□□□□ 0.5
RPS28-202ENST00000449223 CCL4P13236 92 aa18.17■□□□□ 0.5
RPS28-202ENST00000449223 IL10P22301 178 aa18.17■□□□□ 0.5
RPS28-202ENST00000449223 PTPN6P29350 595 aa18.17■□□□□ 0.5
RPS28-202ENST00000449223 TRPC1P48995 793 aa18.17■□□□□ 0.5
RPS28-202ENST00000449223 ALDH9A1P49189 494 aa18.17■□□□□ 0.5
RPS28-202ENST00000449223 RAB15P59190 212 aa18.17■□□□□ 0.5
RPS28-202ENST00000449223 SHC2P98077 582 aa18.17■□□□□ 0.5
RPS28-202ENST00000449223 ACTN3Q08043 901 aaPredicted RBP18.17■□□□□ 0.5
RPS28-202ENST00000449223 ART3Q13508 389 aa18.17■□□□□ 0.5
RPS28-202ENST00000449223 CCDC157Q569K6 752 aa18.17■□□□□ 0.5
RPS28-202ENST00000449223 HES3Q5TGS1 186 aa18.17■□□□□ 0.5
RPS28-202ENST00000449223 ZNF385CQ66K41 422 aaPredicted RBP18.17■□□□□ 0.5
RPS28-202ENST00000449223 C16orf89Q6UX73 402 aa18.17■□□□□ 0.5
RPS28-202ENST00000449223 TMEM126BQ8IUX1 230 aa18.17■□□□□ 0.5
RPS28-202ENST00000449223 SAMD14Q8IZD0 417 aaPredicted RBP18.17■□□□□ 0.5
RPS28-202ENST00000449223 PGAM4Q8N0Y7 254 aa18.17■□□□□ 0.5
RPS28-202ENST00000449223 LRFN5Q96NI6 719 aa18.17■□□□□ 0.5
RPS28-202ENST00000449223 OR1F2PQ96R84 312 aa18.17■□□□□ 0.5
RPS28-202ENST00000449223 UTS2RQ9UKP6 389 aa18.17■□□□□ 0.5
RPS28-202ENST00000449223 PSME2Q9UL46 239 aa18.17■□□□□ 0.5
RPS28-202ENST00000449223 LOXL2Q9Y4K0 774 aa18.17■□□□□ 0.5
RPS28-202ENST00000449223 NUP210LQ5VU65 1888 aa18.16■□□□□ 0.5
RPS28-202ENST00000449223 A0A096LPI6 279 aa18.16■□□□□ 0.5
RPS28-202ENST00000449223 TRBV5-3A0A0A0MS03 114 aa18.16■□□□□ 0.5
RPS28-202ENST00000449223 PDPK1O15530 556 aa18.16■□□□□ 0.5
RPS28-202ENST00000449223 PRKRAO75569 313 aaKnown RBP18.16■□□□□ 0.5
RPS28-202ENST00000449223 RORAP35398 523 aa18.16■□□□□ 0.5
RPS28-202ENST00000449223 RAB11FIP2Q7L804 512 aa18.16■□□□□ 0.5
RPS28-202ENST00000449223 OR51Q1Q8NH59 317 aa18.16■□□□□ 0.5
RPS28-202ENST00000449223 PSMA8Q8TAA3 256 aa18.16■□□□□ 0.5
RPS28-202ENST00000449223 TANKQ92844 425 aa18.16■□□□□ 0.5
RPS28-202ENST00000449223 UCN3Q969E3 161 aa18.16■□□□□ 0.5
RPS28-202ENST00000449223 LRRC58Q96CX6 371 aa18.16■□□□□ 0.5
RPS28-202ENST00000449223 CNRIP1Q96F85 164 aaPredicted RBP18.16■□□□□ 0.5
RPS28-202ENST00000449223 PHF12Q96QT6 1004 aa18.16■□□□□ 0.5
RPS28-202ENST00000449223 HOPXQ9BPY8 73 aaPredicted RBP18.16■□□□□ 0.5
RPS28-202ENST00000449223 PAIP1Q9H074 479 aaKnown RBP18.16■□□□□ 0.5
RPS28-202ENST00000449223 ZNF304Q9HCX3 659 aa18.16■□□□□ 0.5
RPS28-202ENST00000449223 ERVK-11Q9UQG0 969 aa18.16■□□□□ 0.5
RPS28-202ENST00000449223 NEUROG3Q9Y4Z2 214 aa18.16■□□□□ 0.5
RPS28-202ENST00000449223 GMEB1Q9Y692 573 aa18.16■□□□□ 0.5
RPS28-202ENST00000449223 CCDC187A0A096LP49 1063 aa18.15■□□□□ 0.5
RPS28-202ENST00000449223 MYO1GB0I1T2 1018 aa18.15■□□□□ 0.5
RPS28-202ENST00000449223 GYG2O15488 501 aa18.15■□□□□ 0.5
RPS28-202ENST00000449223 KCNH1O95259 989 aa18.15■□□□□ 0.5
RPS28-202ENST00000449223 ZCCHC18P0CG32 403 aa18.15■□□□□ 0.5
RPS28-202ENST00000449223 ALAS2P22557 587 aa18.15■□□□□ 0.5
RPS28-202ENST00000449223 SLC25A3Q00325 362 aa18.15■□□□□ 0.5
RPS28-202ENST00000449223 NFYCQ13952 458 aa18.15■□□□□ 0.5
RPS28-202ENST00000449223 CEACAM20Q6UY09 585 aa18.15■□□□□ 0.5
RPS28-202ENST00000449223 DHDDSQ86SQ9 333 aa18.15■□□□□ 0.5
RPS28-202ENST00000449223 ZNF595Q8IYB9 648 aa18.15■□□□□ 0.5
RPS28-202ENST00000449223 KIAA2013Q8IYS2 634 aa18.15■□□□□ 0.5
RPS28-202ENST00000449223 SLC38A9Q8NBW4 561 aa18.15■□□□□ 0.5
RPS28-202ENST00000449223 CIDECQ96AQ7 238 aaPredicted RBP18.15■□□□□ 0.5
RPS28-202ENST00000449223 KLHL29Q96CT2 875 aa18.15■□□□□ 0.5
RPS28-202ENST00000449223 ZBED6CLQ96FA7 236 aaPredicted RBP18.15■□□□□ 0.5
RPS28-202ENST00000449223 ZNF681Q96N22 645 aa18.15■□□□□ 0.5
RPS28-202ENST00000449223 ZPBPQ9BS86 351 aa18.15■□□□□ 0.5
RPS28-202ENST00000449223 NEUROD4Q9HD90 331 aa18.15■□□□□ 0.5
RPS28-202ENST00000449223 SLAMF7Q9NQ25 335 aa18.15■□□□□ 0.5
RPS28-202ENST00000449223 SLAMF8Q9P0V8 285 aa18.15■□□□□ 0.5
RPS28-202ENST00000449223 HCN3Q9P1Z3 774 aa18.15■□□□□ 0.5
RPS28-202ENST00000449223 C5AR2Q9P296 337 aa18.15■□□□□ 0.5
RPS28-202ENST00000449223 MRPS33Q9Y291 106 aaKnown RBP18.15■□□□□ 0.5
RPS28-202ENST00000449223 IGLV3-12A0A075B6K2 115 aa18.14■□□□□ 0.49
RPS28-202ENST00000449223 SPAARA0A1B0GVQ0 90 aa18.14■□□□□ 0.49
RPS28-202ENST00000449223 GLOD5A6NK44 160 aa18.14■□□□□ 0.49
RPS28-202ENST00000449223 RFXANKO14593 260 aa18.14■□□□□ 0.49
RPS28-202ENST00000449223 GFRA3O60609 400 aa18.14■□□□□ 0.49
RPS28-202ENST00000449223 CPNE3O75131 537 aaKnown RBP18.14■□□□□ 0.49
RPS28-202ENST00000449223 PPP2R1BP30154 601 aa18.14■□□□□ 0.49
RPS28-202ENST00000449223 SIM1P81133 766 aaPredicted RBP18.14■□□□□ 0.49
RPS28-202ENST00000449223 MXRA7P84157 204 aa18.14■□□□□ 0.49
RPS28-202ENST00000449223 TMEM52Q8NDY8 209 aa18.14■□□□□ 0.49
RPS28-202ENST00000449223 EXOSC8Q96B26 276 aaKnown RBP18.14■□□□□ 0.49
RPS28-202ENST00000449223 TBC1D20Q96BZ9 403 aa18.14■□□□□ 0.49
RPS28-202ENST00000449223 MIEF2Q96C03 454 aa18.14■□□□□ 0.49
RPS28-202ENST00000449223 CGREF1Q99674 301 aa18.14■□□□□ 0.49
RPS28-202ENST00000449223 DDA1Q9BW61 102 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms