RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 HOXD12P35452 270 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 GRSF1Q12849 480 aaKnown RBP eCLIP6.85□□□□□ -1.31
BEST1-202ENST00000449131 CATSPEREQ5SY80 951 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 OTUD1Q5VV17 481 aaPredicted RBP6.85□□□□□ -1.31
BEST1-202ENST00000449131 ADNP2Q6IQ32 1131 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 NXPE4Q6UWF7 544 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 ZSWIM9Q86XI8 627 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 SLC5A8Q8N695 610 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 SCAIQ8N9R8 606 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 LMNTD1Q8N9Z9 388 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 JPH3Q8WXH2 748 aaPredicted RBP6.85□□□□□ -1.31
BEST1-202ENST00000449131 MYLIPQ8WY64 445 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 PMEPA1Q969W9 287 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 PDCD10Q9BUL8 212 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 HCFC1R1Q9NWW0 138 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 COMMD9Q9P000 198 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 AKAP7Q9P0M2 348 aaPredicted RBP6.85□□□□□ -1.31
BEST1-202ENST00000449131 POLR2AP24928 1970 aaKnown RBP6.85□□□□□ -1.31
BEST1-202ENST00000449131 ADAMTS4O75173 837 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 BCAS1O75363 584 aaPredicted RBP6.85□□□□□ -1.31
BEST1-202ENST00000449131 KLKB1P03952 638 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 FCER2P06734 321 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 ASGR2P07307 311 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 AHCYP23526 432 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 ACADLP28330 430 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 NR4A2P43354 598 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 CRISP1P54107 249 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 RUNDC3AQ59EK9 446 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 THOC7Q6I9Y2 204 aaKnown RBP6.85□□□□□ -1.31
BEST1-202ENST00000449131 NIPAL1Q6NVV3 410 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 TUBA3EQ6PEY2 450 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 FAM180AQ6UWF9 173 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 Q6ZPB1 254 aaPredicted RBP6.85□□□□□ -1.31
BEST1-202ENST00000449131 GALNT7Q86SF2 657 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 IGFN1Q86VF2 1251 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 MFSD6LQ8IWD5 586 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 CHERPQ8IWX8 916 aaKnown RBP6.85□□□□□ -1.31
BEST1-202ENST00000449131 MFSD2AQ8NA29 543 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 OR10H5Q8NGA6 315 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 NDNFQ8TB73 568 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 ZFP90Q8TF47 636 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 TSEN15Q8WW01 171 aaKnown RBP6.85□□□□□ -1.31
BEST1-202ENST00000449131 PPP1R14AQ96A00 147 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 TRNT1Q96Q11 434 aaKnown RBP6.85□□□□□ -1.31
BEST1-202ENST00000449131 SLC22A4Q9H015 551 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 KCNK12Q9HB15 430 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 PLAC1Q9HBJ0 212 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 MKKSQ9NPJ1 570 aaPredicted RBP6.85□□□□□ -1.31
BEST1-202ENST00000449131 HEBP1Q9NRV9 189 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 ERVK13-1Q9NX77 482 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 C5AR2Q9P296 337 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 PRAMEF33A0A0G2JMD5 474 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 IGLON5A6NGN9 336 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 A8MUA0 341 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 EIF3FO00303 357 aaPredicted RBP6.85□□□□□ -1.31
BEST1-202ENST00000449131 ACOT8O14734 319 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 PRAMEF10O60809 474 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 NOS1APO75052 506 aaPredicted RBP6.85□□□□□ -1.31
BEST1-202ENST00000449131 DNAJB5O75953 348 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 AGR2O95994 175 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 HOXB2P14652 356 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 ACVR2AP27037 513 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 ARNTP27540 789 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 SHMT2P34897 504 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 PGFP49763 221 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 SLC3A1Q07837 685 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 DSC1Q08554 894 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 HYAL2Q12891 473 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 TRAM2Q15035 370 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 NDUFA5Q16718 116 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 FAM214AQ32MH5 1076 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 KHDRBS2Q5VWX1 349 aaKnown RBP6.85□□□□□ -1.31
BEST1-202ENST00000449131 RPTNQ6XPR3 784 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 TSPYL5Q86VY4 417 aaPredicted RBP6.85□□□□□ -1.31
BEST1-202ENST00000449131 DCP2Q8IU60 420 aaKnown RBP6.85□□□□□ -1.31
BEST1-202ENST00000449131 FUNDC1Q8IVP5 155 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 TEX26Q8N6G2 289 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 DOK4Q8TEW6 326 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 NCSTNQ92542 709 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 GTF2H4Q92759 462 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 ISL2Q96A47 359 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 EHD1Q9H4M9 534 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 DCAF13Q9NV06 445 aaKnown RBP6.85□□□□□ -1.31
BEST1-202ENST00000449131 MKLN1Q9UL63 735 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 ACSL5Q9ULC5 683 aa6.85□□□□□ -1.31
BEST1-202ENST00000449131 PPIEQ9UNP9 301 aaKnown RBP6.85□□□□□ -1.31
BEST1-202ENST00000449131 E2F3O00716 465 aa6.84□□□□□ -1.31
BEST1-202ENST00000449131 REM1O75628 298 aa6.84□□□□□ -1.31
BEST1-202ENST00000449131 RCBTB2O95199 551 aa6.84□□□□□ -1.31
BEST1-202ENST00000449131 HLA-DPB1P04440 258 aa6.84□□□□□ -1.31
BEST1-202ENST00000449131 POLR2CP19387 275 aaPredicted RBP6.84□□□□□ -1.31
BEST1-202ENST00000449131 CELP19835 753 aa6.84□□□□□ -1.31
BEST1-202ENST00000449131 TCEA1P23193 301 aaKnown RBP6.84□□□□□ -1.31
BEST1-202ENST00000449131 SLAMF1Q13291 335 aa6.84□□□□□ -1.31
BEST1-202ENST00000449131 CDK5R2Q13319 367 aa6.84□□□□□ -1.31
BEST1-202ENST00000449131 LIPKQ5VXJ0 399 aa6.84□□□□□ -1.31
BEST1-202ENST00000449131 PPP2R2DQ66LE6 453 aa6.84□□□□□ -1.31
BEST1-202ENST00000449131 FAAH2Q6GMR7 532 aa6.84□□□□□ -1.31
BEST1-202ENST00000449131 HMBOX1Q6NT76 420 aa6.84□□□□□ -1.31
BEST1-202ENST00000449131 ABHD13Q7L211 337 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms