RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 PRRX2Q99811 253 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 POLDIP3Q9BY77 421 aaKnown RBP8.2□□□□□ -1.1
PTPN3-204ENST00000446349 TTC34A8MYJ7 566 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 PDLIM1O00151 329 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 HSPA12AO43301 675 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 FAM189A1O60320 539 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 GALNT1Q10472 559 aaPredicted RBP8.2□□□□□ -1.1
PTPN3-204ENST00000446349 FAM182AQ5T1J6 154 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 KIAA0907Q7Z7F0 614 aaPredicted RBP8.2□□□□□ -1.1
PTPN3-204ENST00000446349 TMEM139Q8IV31 216 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 UBALD2Q8IYN6 164 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 GHDCQ8N2G8 530 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 ZNF366Q8N895 744 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 HDAC2Q92769 488 aaKnown RBP8.2□□□□□ -1.1
PTPN3-204ENST00000446349 S100A16Q96FQ6 103 aaKnown RBP8.2□□□□□ -1.1
PTPN3-204ENST00000446349 TUBA1CQ9BQE3 449 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 TTYH2Q9BSA4 534 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 APOOQ9BUR5 198 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 MYNNQ9NPC7 610 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 H7BY64 318 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 KIAA0355O15063 1070 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 TMEM63AO94886 807 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 GDF10P55107 478 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 TBPL1P62380 186 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 RIN1Q13671 783 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 NSDHLQ15738 373 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 PKDCCQ504Y2 493 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 OR4F3Q6IEY1 312 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 MAMDC2Q7Z304 686 aaPredicted RBP8.2□□□□□ -1.1
PTPN3-204ENST00000446349 NFKBIDQ8NI38 313 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 FANK1Q8TC84 345 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 DHRS1Q96LJ7 313 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 PRAP1Q96NZ9 151 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 ALPK1Q96QP1 1244 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 URM1Q9BTM9 101 aaKnown RBP8.2□□□□□ -1.1
PTPN3-204ENST00000446349 KATNBL1Q9H079 304 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 MEPEQ9NQ76 525 aaPredicted RBP8.2□□□□□ -1.1
PTPN3-204ENST00000446349 A6NIZ1 184 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 CREG1O75629 220 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 RAD51DO75771 328 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 GLULP15104 373 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 AOC1P19801 751 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 CD38P28907 300 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 GABRA3P34903 492 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 MC3RP41968 323 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 CRISP1P54107 249 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 MTPNP58546 118 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 RAP1BP61224 184 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 RAP1AP62834 184 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 MAD2L1BPQ15013 274 aaPredicted RBP8.2□□□□□ -1.1
PTPN3-204ENST00000446349 CTC1Q2NKJ3 1217 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 S100A7AQ86SG5 101 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 THEM6Q8WUY1 208 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 MRPL38Q96DV4 380 aaKnown RBP8.2□□□□□ -1.1
PTPN3-204ENST00000446349 FER1L6-AS2Q96M78 137 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 SMG9Q9H0W8 520 aaKnown RBP8.2□□□□□ -1.1
PTPN3-204ENST00000446349 MAGIXQ9H6Y5 334 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 CIDEBQ9UHD4 219 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 CFAP20Q9Y6A4 193 aaKnown RBP8.2□□□□□ -1.1
PTPN3-204ENST00000446349 A0A0G2JPF8 293 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 HNRNPCL3B7ZW38 293 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 HNRNPCL4P0DMR1 293 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 CHAF1BQ13112 559 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 GFOD2Q3B7J2 385 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 RAET1LQ5VY80 246 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 C3orf33Q6P1S2 294 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 LCTLQ6UWM7 567 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 ARMC10Q8N2F6 343 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 MFSD2AQ8NA29 543 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 OR2T33Q8NG76 320 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 FAM110BQ8TC76 370 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 HSPA12BQ96MM6 686 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 DPH7Q9BTV6 452 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 MROQ9BYG7 248 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 GALPQ9UBC7 116 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 PACSIN3Q9UKS6 424 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 BOKQ9UMX3 212 aaPredicted RBP8.2□□□□□ -1.1
PTPN3-204ENST00000446349 SLC35A3Q9Y2D2 325 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 SIT1Q9Y3P8 196 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 LAMB1P07942 1786 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 CENPBD1B2RD01 187 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 MTX2O75431 263 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 CLPXO76031 633 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 RAB8AP61006 207 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 ZNF829Q3KNS6 432 aaPredicted RBP8.2□□□□□ -1.1
PTPN3-204ENST00000446349 TMEM53Q6P2H8 277 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 PAPD5Q8NDF8 572 aaKnown RBP8.2□□□□□ -1.1
PTPN3-204ENST00000446349 ZBED3Q96IU2 234 aaPredicted RBP8.2□□□□□ -1.1
PTPN3-204ENST00000446349 ERMAPQ96PL5 475 aaPredicted RBP8.2□□□□□ -1.1
PTPN3-204ENST00000446349 OR51F1A6NGY5 319 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 CD46P15529 392 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 AP2S1P53680 142 aaPredicted RBP8.2□□□□□ -1.1
PTPN3-204ENST00000446349 YOD1Q5VVQ6 348 aaPredicted RBP8.2□□□□□ -1.1
PTPN3-204ENST00000446349 IQCF2Q8IXL9 164 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 RPLP0P6Q8NHW5 317 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 SPTSSAQ969W0 71 aa8.2□□□□□ -1.1
PTPN3-204ENST00000446349 DISC1C4P0D8 188 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 ZNF878C9JN71 531 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 CNTN5O94779 1100 aa8.19□□□□□ -1.1
PTPN3-204ENST00000446349 H6PDO95479 791 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms